Show of Hands:Votes: Party classification:: Q109244NA_Ensemble_cnk03_rest
bdanalytics
Date: (Mon) Jun 13, 2016
Introduction:
Data: Source: Training: “https://inclass.kaggle.com/c/can-we-predict-voting-outcomes/download/train2016.csv”
New: “https://inclass.kaggle.com/c/can-we-predict-voting-outcomes/download/test2016.csv”
Time period:
Synopsis:
Based on analysis utilizing <> techniques,
Summary of key steps & error improvement stats:
Prediction Accuracy Enhancement Options:
- transform.data chunk:
- derive features from multiple features
- manage.missing.data chunk:
- Not fill missing vars
- Fill missing numerics with a different algorithm
- Fill missing chars with data based on clusters
[](.png)
Potential next steps include:
- Organization:
- Categorize by chunk
- Priority criteria:
- Ease of change
- Impacts report
- Cleans innards
- Bug report
- all chunks:
- at chunk-end rm(!glb_)
- manage.missing.data chunk:
- cleaner way to manage re-splitting of training vs. new entity
- extract.features chunk:
- Add n-grams for glbFeatsText
- “RTextTools”, “tau”, “RWeka”, and “textcat” packages
- Add n-grams for glbFeatsText
- fit.models chunk:
- Classification: Plot AUC Curves for all models & highlight glbMdlSel
- Prediction accuracy scatter graph:
- Add tiles (raw vs. PCA)
- Use shiny for drop-down of “important” features
Use plot.ly for interactive plots ?
- Change .fit suffix of model metrics to .mdl if it’s data independent (e.g. AIC, Adj.R.Squared - is it truly data independent ?, etc.)
- create a custom model for rpart that has minbucket as a tuning parameter
varImp for randomForest crashes in caret version:6.0.41 -> submit bug report
- Probability handling for multinomials vs. desired binomial outcome
- ROCR currently supports only evaluation of binary classification tasks (version 1.0.7)
extensions toward multiclass classification are scheduled for the next release
- fit.all.training chunk:
- myplot_prediction_classification: displays ‘x’ instead of ‘+’ when there are no prediction errors
- Compare glb_sel_mdl vs. glb_fin_mdl:
- varImp
- Prediction differences (shd be minimal ?)
- Move glb_analytics_diag_plots to mydsutils.R: (+) Easier to debug (-) Too many glb vars used
- Add print(ggplot.petrinet(glb_analytics_pn) + coord_flip()) at the end of every major chunk
- Parameterize glb_analytics_pn
- Move glb_impute_missing_data to mydsutils.R: (-) Too many glb vars used; glb_<>_df reassigned
- Do non-glm methods handle interaction terms ?
- f-score computation for classifiers should be summation across outcomes (not just the desired one ?)
- Add accuracy computation to glb_dmy_mdl in predict.data.new chunk
- Why does splitting fit.data.training.all chunk into separate chunks add an overhead of ~30 secs ? It’s not rbind b/c other chunks have lower elapsed time. Is it the number of plots ?
- Incorporate code chunks in print_sessionInfo
- Test against
- projects in github.com/bdanalytics
- lectures in jhu-datascience track
Analysis:
rm(list = ls())
set.seed(12345)
options(stringsAsFactors = FALSE)
source("~/Dropbox/datascience/R/mycaret.R")
source("~/Dropbox/datascience/R/mypetrinet.R")
source("~/Dropbox/datascience/R/myplclust.R")
source("~/Dropbox/datascience/R/myplot.R")
source("~/Dropbox/datascience/R/myscript.R")
source("~/Dropbox/datascience/R/mytm.R")
if (is.null(knitr::opts_current$get(name = 'label'))) # Running in IDE
debugSource("~/Dropbox/datascience/R/mydsutils.R") else
source("~/Dropbox/datascience/R/mydsutils.R") ## Loading required package: caret## Loading required package: lattice# Gather all package requirements here
suppressPackageStartupMessages(require(doMC))
glbCores <- 10 # of cores on machine - 2
registerDoMC(glbCores)
suppressPackageStartupMessages(require(caret))
require(plyr)## Loading required package: plyrrequire(dplyr)## Loading required package: dplyr##
## Attaching package: 'dplyr'## The following objects are masked from 'package:plyr':
##
## arrange, count, desc, failwith, id, mutate, rename, summarise,
## summarize## The following objects are masked from 'package:stats':
##
## filter, lag## The following objects are masked from 'package:base':
##
## intersect, setdiff, setequal, unionrequire(knitr)## Loading required package: knitrrequire(stringr)## Loading required package: stringr#source("dbgcaret.R")
#packageVersion("snow")
#require(sos); findFn("cosine", maxPages=2, sortby="MaxScore")
# Analysis control global variables
# Inputs
# url/name = "<PathPointer>"; if url specifies a zip file, name = "<filename>";
# or named collection of <PathPointer>s
# sep = choose from c(NULL, "\t")
glbObsTrnFile <- list(url = "https://inclass.kaggle.com/c/can-we-predict-voting-outcomes/download/train2016.csv"
# or list(url = c(NULL, <.inp1> = "<path1>", <.inp2> = "<path2>"))
#, splitSpecs = list(method = "copy" # default when glbObsNewFile is NULL
# select from c("copy", NULL ???, "condition", "sample", )
# ,nRatio = 0.3 # > 0 && < 1 if method == "sample"
# ,seed = 123 # any integer or glbObsTrnPartitionSeed if method == "sample"
# ,condition = # or 'is.na(<var>)'; '<var> <condition_operator> <value>'
# )
)
glbObsNewFile <- list(url = "https://inclass.kaggle.com/c/can-we-predict-voting-outcomes/download/test2016.csv")
glbObsDropCondition <- #NULL # : default
# enclose in single-quotes b/c condition might include double qoutes
# use | & ; NOT || &&
# '<condition>'
# 'grepl("^First Draft Video:", glbObsAll$Headline)'
# 'is.na(glbObsAll[, glb_rsp_var_raw])'
# '(is.na(glbObsAll[, glb_rsp_var_raw]) & grepl("Train", glbObsAll[, glbFeatsId]))'
# 'is.na(strptime(glbObsAll[, "Date"], glbFeatsDateTime[["Date"]]["format"], tz = glbFeatsDateTime[["Date"]]["timezone"]))'
# '(is.na(glbObsAll[, "Q109244"]) | (glbObsAll[, "Q109244"] != "No"))' # No
'(glbObsAll[, "Q109244"] != "")' # NA
#nrow(do.call("subset",list(glbObsAll, parse(text=paste0("!(", glbObsDropCondition, ")")))))
glb_obs_repartition_train_condition <- NULL # : default
# "<condition>"
glb_max_fitobs <- NULL # or any integer
glbObsTrnPartitionSeed <- 123 # or any integer
glb_is_regression <- FALSE; glb_is_classification <- !glb_is_regression;
glb_is_binomial <- TRUE # or TRUE or FALSE
glb_rsp_var_raw <- "Party"
# for classification, the response variable has to be a factor
glb_rsp_var <- "Party.fctr"
# if the response factor is based on numbers/logicals e.g (0/1 OR TRUE/FALSE vs. "A"/"B"),
# or contains spaces (e.g. "Not in Labor Force")
# caret predict(..., type="prob") crashes
glb_map_rsp_raw_to_var <- #NULL
function(raw) {
# return(raw ^ 0.5)
# return(log(raw))
# return(log(1 + raw))
# return(log10(raw))
# return(exp(-raw / 2))
#
# chk ref value against frequencies vs. alpha sort order
ret_vals <- rep_len(NA, length(raw)); ret_vals[!is.na(raw)] <- ifelse(raw[!is.na(raw)] == "Republican", "R", "D"); return(relevel(as.factor(ret_vals), ref = "D"))
# as.factor(paste0("B", raw))
# as.factor(gsub(" ", "\\.", raw))
}
#if glb_rsp_var_raw is numeric:
#print(summary(glbObsAll[, glb_rsp_var_raw]))
#glb_map_rsp_raw_to_var(tst <- c(NA, as.numeric(summary(glbObsAll[, glb_rsp_var_raw]))))
#if glb_rsp_var_raw is character:
#print(table(glbObsAll[, glb_rsp_var_raw], useNA = "ifany"))
# print(table(glb_map_rsp_raw_to_var(tst <- glbObsAll[, glb_rsp_var_raw]), useNA = "ifany"))
glb_map_rsp_var_to_raw <- #NULL
function(var) {
# return(var ^ 2.0)
# return(exp(var))
# return(10 ^ var)
# return(-log(var) * 2)
# as.numeric(var)
# levels(var)[as.numeric(var)]
sapply(levels(var)[as.numeric(var)], function(elm)
if (is.na(elm)) return(elm) else
if (elm == 'R') return("Republican") else
if (elm == 'D') return("Democrat") else
stop("glb_map_rsp_var_to_raw: unexpected value: ", elm)
)
# gsub("\\.", " ", levels(var)[as.numeric(var)])
# c("<=50K", " >50K")[as.numeric(var)]
# c(FALSE, TRUE)[as.numeric(var)]
}
# print(table(glb_map_rsp_var_to_raw(glb_map_rsp_raw_to_var(tst)), useNA = "ifany"))
if ((glb_rsp_var != glb_rsp_var_raw) && is.null(glb_map_rsp_raw_to_var))
stop("glb_map_rsp_raw_to_var function expected")
# List info gathered for various columns
# <col_name>: <description>; <notes>
# USER_ID - an anonymous id unique to a given user
# YOB - the year of birth of the user
# Gender - the gender of the user, either Male or Female
# Income - the household income of the user. Either not provided, or one of "under $25,000", "$25,001 - $50,000", "$50,000 - $74,999", "$75,000 - $100,000", "$100,001 - $150,000", or "over $150,000".
# HouseholdStatus - the household status of the user. Either not provided, or one of "Domestic Partners (no kids)", "Domestic Partners (w/kids)", "Married (no kids)", "Married (w/kids)", "Single (no kids)", or "Single (w/kids)".
# EducationalLevel - the education level of the user. Either not provided, or one of "Current K-12", "High School Diploma", "Current Undergraduate", "Associate's Degree", "Bachelor's Degree", "Master's Degree", or "Doctoral Degree".
# Party - the political party for whom the user intends to vote for. Either "Democrat" or "Republican
# Q124742, Q124122, . . . , Q96024 - 101 different questions that the users were asked on Show of Hands. If the user didn't answer the question, there is a blank. For information about the question text and possible answers, see the file Questions.pdf.
# currently does not handle more than 1 column; consider concatenating multiple columns
# If glbFeatsId == NULL, ".rownames <- as.numeric(row.names())" is the default
glbFeatsId <- "USER_ID" # choose from c(NULL : default, "<id_feat>")
glbFeatsCategory <- "Hhold.fctr" # choose from c(NULL : default, "<category_feat>")
# glbFeatsCategory <- "Q109244.fctr" # choose from c(NULL : default, "<category_feat>")
# glbFeatsCategory <- "Q115611.fctr" # choose from c(NULL : default, "<category_feat>")
# User-specified exclusions
glbFeatsExclude <- c(NULL
# Feats that shd be excluded due to known causation by prediction variable
# , "<feat1", "<feat2>"
# Feats that are factors with unique values (as % of nObs) > 49 (empirically derived)
# Feats that are linear combinations (alias in glm)
# Feature-engineering phase -> start by excluding all features except id & category &
# work each one in
, "USER_ID", "YOB", "Gender", "Income", "HouseholdStatus", "EducationLevel"
,"Q124742","Q124122"
,"Q123621","Q123464"
,"Q122771","Q122770","Q122769","Q122120"
,"Q121700","Q121699","Q121011"
,"Q120978","Q120650","Q120472","Q120379","Q120194","Q120014","Q120012"
,"Q119851","Q119650","Q119334"
,"Q118892","Q118237","Q118233","Q118232","Q118117"
,"Q117193","Q117186"
,"Q116797","Q116881","Q116953","Q116601","Q116441","Q116448","Q116197"
,"Q115602","Q115777","Q115610","Q115611","Q115899","Q115390","Q115195"
,"Q114961","Q114748","Q114517","Q114386","Q114152"
,"Q113992","Q113583","Q113584","Q113181"
,"Q112478","Q112512","Q112270"
,"Q111848","Q111580","Q111220"
,"Q110740"
,"Q109367","Q109244"
,"Q108950","Q108855","Q108617","Q108856","Q108754","Q108342","Q108343"
,"Q107869","Q107491"
,"Q106993","Q106997","Q106272","Q106388","Q106389","Q106042"
,"Q105840","Q105655"
,"Q104996"
,"Q103293"
,"Q102906","Q102674","Q102687","Q102289","Q102089"
,"Q101162","Q101163","Q101596"
,"Q100689","Q100680","Q100562","Q100010"
,"Q99982"
,"Q99716"
,"Q99581"
,"Q99480"
,"Q98869"
,"Q98578"
,"Q98197"
,"Q98059","Q98078"
,"Q96024" # Done
,".pos")
if (glb_rsp_var_raw != glb_rsp_var)
glbFeatsExclude <- union(glbFeatsExclude, glb_rsp_var_raw)
glbFeatsInteractionOnly <- list()
#glbFeatsInteractionOnly[["<child_feat>"]] <- "<parent_feat>"
glbFeatsInteractionOnly[["YOB.Age.dff"]] <- "YOB.Age.fctr"
glbFeatsDrop <- c(NULL
# , "<feat1>", "<feat2>"
)
glb_map_vars <- NULL # or c("<var1>", "<var2>")
glb_map_urls <- list();
# glb_map_urls[["<var1>"]] <- "<var1.url>"
# Derived features; Use this mechanism to cleanse data ??? Cons: Data duplication ???
glbFeatsDerive <- list();
# glbFeatsDerive[["<feat.my.sfx>"]] <- list(
# mapfn = function(<arg1>, <arg2>) { return(function(<arg1>, <arg2>)) }
# , args = c("<arg1>", "<arg2>"))
#myprint_df(data.frame(ImageId = mapfn(glbObsAll$.src, glbObsAll$.pos)))
#data.frame(ImageId = mapfn(glbObsAll$.src, glbObsAll$.pos))[7045:7055, ]
# character
# mapfn = function(Education) { raw <- Education; raw[is.na(raw)] <- "NA.my"; return(as.factor(raw)) }
# mapfn = function(Week) { return(substr(Week, 1, 10)) }
# mapfn = function(Name) { return(sapply(Name, function(thsName)
# str_sub(unlist(str_split(thsName, ","))[1], 1, 1))) }
# mapfn = function(descriptor) { return(plyr::revalue(descriptor, c(
# "ABANDONED BUILDING" = "OTHER",
# "**" = "**"
# ))) }
# mapfn = function(description) { mod_raw <- description;
# This is here because it does not work if it's in txt_map_filename
# mod_raw <- gsub(paste0(c("\n", "\211", "\235", "\317", "\333"), collapse = "|"), " ", mod_raw)
# Don't parse for "." because of ".com"; use customized gsub for that text
# mod_raw <- gsub("(\\w)(!|\\*|,|-|/)(\\w)", "\\1\\2 \\3", mod_raw);
# Some state acrnoyms need context for separation e.g.
# LA/L.A. could either be "Louisiana" or "LosAngeles"
# modRaw <- gsub("\\bL\\.A\\.( |,|')", "LosAngeles\\1", modRaw);
# OK/O.K. could either be "Oklahoma" or "Okay"
# modRaw <- gsub("\\bACA OK\\b", "ACA OKay", modRaw);
# modRaw <- gsub("\\bNow O\\.K\\.\\b", "Now OKay", modRaw);
# PR/P.R. could either be "PuertoRico" or "Public Relations"
# modRaw <- gsub("\\bP\\.R\\. Campaign", "PublicRelations Campaign", modRaw);
# VA/V.A. could either be "Virginia" or "VeteransAdministration"
# modRaw <- gsub("\\bthe V\\.A\\.\\:", "the VeteranAffairs:", modRaw);
#
# Custom mods
# return(mod_raw) }
# numeric
# Create feature based on record position/id in data
glbFeatsDerive[[".pos"]] <- list(
mapfn = function(raw1) { return(1:length(raw1)) }
, args = c(".rnorm"))
# glbFeatsDerive[[".pos.y"]] <- list(
# mapfn = function(raw1) { return(1:length(raw1)) }
# , args = c(".rnorm"))
# Add logs of numerics that are not distributed normally
# Derive & keep multiple transformations of the same feature, if normality is hard to achieve with just one transformation
# Right skew: logp1; sqrt; ^ 1/3; logp1(logp1); log10; exp(-<feat>/constant)
# glbFeatsDerive[["WordCount.log1p"]] <- list(
# mapfn = function(WordCount) { return(log1p(WordCount)) }
# , args = c("WordCount"))
# glbFeatsDerive[["WordCount.root2"]] <- list(
# mapfn = function(WordCount) { return(WordCount ^ (1/2)) }
# , args = c("WordCount"))
# glbFeatsDerive[["WordCount.nexp"]] <- list(
# mapfn = function(WordCount) { return(exp(-WordCount)) }
# , args = c("WordCount"))
#print(summary(glbObsAll$WordCount))
#print(summary(mapfn(glbObsAll$WordCount)))
# If imputation shd be skipped for this feature
# glbFeatsDerive[["District.fctr"]] <- list(
# mapfn = function(District) {
# raw <- District;
# ret_vals <- rep_len("NA", length(raw));
# ret_vals[!is.na(raw)] <- sapply(raw[!is.na(raw)], function(elm)
# ifelse(elm < 10, "1-9",
# ifelse(elm < 20, "10-19", "20+")));
# return(relevel(as.factor(ret_vals), ref = "NA"))
# }
# , args = c("District"))
# YOB options:
# 1. Missing data:
# 1.1 0 -> Does not improve baseline
# 1.2 Cut factors & "NA" is a level
# 2. Data corrections: < 1928 & > 2000
# 3. Scale YOB
# 4. Add Age
# YOB.Age.fctr needs to be synced with YOB.Age.dff; Create a separate sub-function ???
glbFeatsDerive[["YOB.Age.fctr"]] <- list(
mapfn = function(raw1) {
raw <- 2016 - raw1
# raw[!is.na(raw) & raw >= 2010] <- NA
raw[!is.na(raw) & (raw <= 15)] <- NA
raw[!is.na(raw) & (raw >= 90)] <- NA
retVal <- rep_len("NA", length(raw))
# breaks = c(1879, seq(1949, 1989, 10), 2049)
# cutVal <- cut(raw[!is.na(raw)], breaks = breaks,
# labels = as.character(breaks + 1)[1:(length(breaks) - 1)])
cutVal <- cut(raw[!is.na(raw)], breaks = c(15, 20, 25, 30, 35, 40, 50, 65, 90))
retVal[!is.na(raw)] <- levels(cutVal)[cutVal]
return(factor(retVal, levels = c("NA"
,"(15,20]","(20,25]","(25,30]","(30,35]","(35,40]","(40,50]","(50,65]","(65,90]"),
ordered = TRUE))
}
, args = c("YOB"))
# YOB.Age.fctr needs to be synced with YOB.Age.dff; Create a separate sub-function ???
glbFeatsDerive[["YOB.Age.dff"]] <- list(
mapfn = function(raw1) {
raw <- 2016 - raw1
raw[!is.na(raw) & (raw <= 15)] <- NA
raw[!is.na(raw) & (raw >= 90)] <- NA
breaks <- c(15, 20, 25, 30, 35, 40, 50, 65, 90)
# retVal <- rep_len(0, length(raw))
stopifnot(sum(!is.na(raw) && (raw <= 15)) == 0)
stopifnot(sum(!is.na(raw) && (raw >= 90)) == 0)
# msk <- !is.na(raw) && (raw > 15) && (raw <= 20); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 15
# msk <- !is.na(raw) && (raw > 20) && (raw <= 25); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 20
# msk <- !is.na(raw) && (raw > 25) && (raw <= 30); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 25
# msk <- !is.na(raw) && (raw > 30) && (raw <= 35); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 30
# msk <- !is.na(raw) && (raw > 35) && (raw <= 40); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 35
# msk <- !is.na(raw) && (raw > 40) && (raw <= 50); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 40
# msk <- !is.na(raw) && (raw > 50) && (raw <= 65); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 50
# msk <- !is.na(raw) && (raw > 65) && (raw <= 90); if (sum(msk > 0)) retVal[msk] <- raw[msk] - 65
breaks <- c(15, 20, 25, 30, 35, 40, 50, 65, 90)
retVal <- sapply(raw, function(age) {
if (is.na(age)) return(0) else
if ((age > 15) && (age <= 20)) return(age - 15) else
if ((age > 20) && (age <= 25)) return(age - 20) else
if ((age > 25) && (age <= 30)) return(age - 25) else
if ((age > 30) && (age <= 35)) return(age - 30) else
if ((age > 35) && (age <= 40)) return(age - 35) else
if ((age > 40) && (age <= 50)) return(age - 40) else
if ((age > 50) && (age <= 65)) return(age - 50) else
if ((age > 65) && (age <= 90)) return(age - 65)
})
return(retVal)
}
, args = c("YOB"))
glbFeatsDerive[["Gender.fctr"]] <- list(
mapfn = function(raw1) {
raw <- raw1
raw[raw %in% ""] <- "N"
raw <- gsub("Male" , "M", raw, fixed = TRUE)
raw <- gsub("Female", "F", raw, fixed = TRUE)
return(relevel(as.factor(raw), ref = "N"))
}
, args = c("Gender"))
glbFeatsDerive[["Income.fctr"]] <- list(
mapfn = function(raw1) { raw <- raw1;
raw[raw %in% ""] <- "N"
raw <- gsub("under $25,000" , "<25K" , raw, fixed = TRUE)
raw <- gsub("$25,001 - $50,000" , "25-50K" , raw, fixed = TRUE)
raw <- gsub("$50,000 - $74,999" , "50-75K" , raw, fixed = TRUE)
raw <- gsub("$75,000 - $100,000" , "75-100K" , raw, fixed = TRUE)
raw <- gsub("$100,001 - $150,000", "100-150K", raw, fixed = TRUE)
raw <- gsub("over $150,000" , ">150K" , raw, fixed = TRUE)
return(factor(raw, levels = c("N","<25K","25-50K","50-75K","75-100K","100-150K",">150K"),
ordered = TRUE))
}
, args = c("Income"))
glbFeatsDerive[["Hhold.fctr"]] <- list(
mapfn = function(raw1) { raw <- raw1;
raw[raw %in% ""] <- "N"
raw <- gsub("Domestic Partners (no kids)", "PKn", raw, fixed = TRUE)
raw <- gsub("Domestic Partners (w/kids)" , "PKy", raw, fixed = TRUE)
raw <- gsub("Married (no kids)" , "MKn", raw, fixed = TRUE)
raw <- gsub("Married (w/kids)" , "MKy", raw, fixed = TRUE)
raw <- gsub("Single (no kids)" , "SKn", raw, fixed = TRUE)
raw <- gsub("Single (w/kids)" , "SKy", raw, fixed = TRUE)
return(relevel(as.factor(raw), ref = "N"))
}
, args = c("HouseholdStatus"))
glbFeatsDerive[["Edn.fctr"]] <- list(
mapfn = function(raw1) { raw <- raw1;
raw[raw %in% ""] <- "N"
raw <- gsub("Current K-12" , "K12", raw, fixed = TRUE)
raw <- gsub("High School Diploma" , "HSD", raw, fixed = TRUE)
raw <- gsub("Current Undergraduate", "CCg", raw, fixed = TRUE)
raw <- gsub("Associate's Degree" , "Ast", raw, fixed = TRUE)
raw <- gsub("Bachelor's Degree" , "Bcr", raw, fixed = TRUE)
raw <- gsub("Master's Degree" , "Msr", raw, fixed = TRUE)
raw <- gsub("Doctoral Degree" , "PhD", raw, fixed = TRUE)
return(factor(raw, levels = c("N","K12","HSD","CCg","Ast","Bcr","Msr","PhD"),
ordered = TRUE))
}
, args = c("EducationLevel"))
# for (qsn in c("Q124742","Q124122"))
# for (qsn in grep("Q12(.{4})(?!\\.fctr)", names(glbObsTrn), value = TRUE, perl = TRUE))
for (qsn in grep("Q", glbFeatsExclude, fixed = TRUE, value = TRUE))
glbFeatsDerive[[paste0(qsn, ".fctr")]] <- list(
mapfn = function(raw1) {
raw1[raw1 %in% ""] <- "NA"
rawVal <- unique(raw1)
if (length(setdiff(rawVal, (expVal <- c("NA", "No", "Ys")))) == 0) {
raw1 <- gsub("Yes", "Ys", raw1, fixed = TRUE)
if (length(setdiff(rawVal, expVal)) > 0)
stop(qsn, " vals: ", paste0(rawVal, collapse = "|"),
" does not match expectation: ", paste0(expVal, collapse = "|"))
} else
if (length(setdiff(rawVal, (expVal <- c("NA", "Me", "Circumstances")))) == 0) {
raw1 <- gsub("Circumstances", "Cs", raw1, fixed = TRUE)
if (length(setdiff(rawVal, expVal)) > 0)
stop(qsn, " vals: ", paste0(rawVal, collapse = "|"),
" does not match expectation: ", paste0(expVal, collapse = "|"))
} else
if (length(setdiff(rawVal, (expVal <- c("NA", "Grrr people", "Yay people!")))) == 0) {
raw1 <- gsub("Grrr people", "Gr", raw1, fixed = TRUE)
raw1 <- gsub("Yay people!", "Yy", raw1, fixed = TRUE)
if (length(setdiff(rawVal, expVal)) > 0)
stop(qsn, " vals: ", paste0(rawVal, collapse = "|"),
" does not match expectation: ", paste0(expVal, collapse = "|"))
} else
if (length(setdiff(rawVal, (expVal <- c("NA", "Idealist", "Pragmatist")))) == 0) {
raw1 <- gsub("Idealist" , "Id", raw1, fixed = TRUE)
raw1 <- gsub("Pragmatist", "Pr", raw1, fixed = TRUE)
if (length(setdiff(rawVal, expVal)) > 0)
stop(qsn, " vals: ", paste0(rawVal, collapse = "|"),
" does not match expectation: ", paste0(expVal, collapse = "|"))
} else
if (length(setdiff(rawVal, (expVal <- c("NA", "Private", "Public")))) == 0) {
raw1 <- gsub("Private", "Pt", raw1, fixed = TRUE)
raw1 <- gsub("Public" , "Pc", raw1, fixed = TRUE)
if (length(setdiff(rawVal, expVal)) > 0)
stop(qsn, " vals: ", paste0(rawVal, collapse = "|"),
" does not match expectation: ", paste0(expVal, collapse = "|"))
}
return(relevel(as.factor(raw1), ref = "NA"))
}
, args = c(qsn))
# If imputation of missing data is not working ...
# glbFeatsDerive[["FertilityRate.nonNA"]] <- list(
# mapfn = function(FertilityRate, Region) {
# RegionMdn <- tapply(FertilityRate, Region, FUN = median, na.rm = TRUE)
#
# retVal <- FertilityRate
# retVal[is.na(FertilityRate)] <- RegionMdn[Region[is.na(FertilityRate)]]
# return(retVal)
# }
# , args = c("FertilityRate", "Region"))
# mapfn = function(HOSPI.COST) { return(cut(HOSPI.COST, 5, breaks = c(0, 100000, 200000, 300000, 900000), labels = NULL)) }
# mapfn = function(Rasmussen) { return(ifelse(sign(Rasmussen) >= 0, 1, 0)) }
# mapfn = function(startprice) { return(startprice ^ (1/2)) }
# mapfn = function(startprice) { return(log(startprice)) }
# mapfn = function(startprice) { return(exp(-startprice / 20)) }
# mapfn = function(startprice) { return(scale(log(startprice))) }
# mapfn = function(startprice) { return(sign(sprice.predict.diff) * (abs(sprice.predict.diff) ^ (1/10))) }
# factor
# mapfn = function(PropR) { return(as.factor(ifelse(PropR >= 0.5, "Y", "N"))) }
# mapfn = function(productline, description) { as.factor(gsub(" ", "", productline)) }
# mapfn = function(purpose) { return(relevel(as.factor(purpose), ref="all_other")) }
# mapfn = function(raw) { tfr_raw <- as.character(cut(raw, 5));
# tfr_raw[is.na(tfr_raw)] <- "NA.my";
# return(as.factor(tfr_raw)) }
# mapfn = function(startprice.log10) { return(cut(startprice.log10, 3)) }
# mapfn = function(startprice.log10) { return(cut(sprice.predict.diff, c(-1000, -100, -10, -1, 0, 1, 10, 100, 1000))) }
# , args = c("<arg1>"))
# multiple args
# mapfn = function(id, date) { return(paste(as.character(id), as.character(date), sep = "#")) }
# mapfn = function(PTS, oppPTS) { return(PTS - oppPTS) }
# mapfn = function(startprice.log10.predict, startprice) {
# return(spdiff <- (10 ^ startprice.log10.predict) - startprice) }
# mapfn = function(productline, description) { as.factor(
# paste(gsub(" ", "", productline), as.numeric(nchar(description) > 0), sep = "*")) }
# mapfn = function(.src, .pos) {
# return(paste(.src, sprintf("%04d",
# ifelse(.src == "Train", .pos, .pos - 7049)
# ), sep = "#")) }
# # If glbObsAll is not sorted in the desired manner
# mapfn=function(Week) { return(coredata(lag(zoo(orderBy(~Week, glbObsAll)$ILI), -2, na.pad=TRUE))) }
# mapfn=function(ILI) { return(coredata(lag(zoo(ILI), -2, na.pad=TRUE))) }
# mapfn=function(ILI.2.lag) { return(log(ILI.2.lag)) }
# glbFeatsDerive[["<var1>"]] <- glbFeatsDerive[["<var2>"]]
# tst <- "descr.my"; args_lst <- NULL; for (arg in glbFeatsDerive[[tst]]$args) args_lst[[arg]] <- glbObsAll[, arg]; print(head(args_lst[[arg]])); print(head(drv_vals <- do.call(glbFeatsDerive[[tst]]$mapfn, args_lst)));
# print(which_ix <- which(args_lst[[arg]] == 0.75)); print(drv_vals[which_ix]);
glbFeatsDateTime <- list()
# Use OlsonNames() to enumerate supported time zones
# glbFeatsDateTime[["<DateTimeFeat>"]] <-
# c(format = "%Y-%m-%d %H:%M:%S" or "%m/%e/%y", timezone = "US/Eastern", impute.na = TRUE,
# last.ctg = FALSE, poly.ctg = FALSE)
glbFeatsPrice <- NULL # or c("<price_var>")
glbFeatsImage <- list() #list(<imageFeat> = list(patchSize = 10)) # if patchSize not specified, no patch computation
glbFeatsText <- list()
Sys.setlocale("LC_ALL", "C") # For english## [1] "C/C/C/C/C/en_US.UTF-8"#glbFeatsText[["<TextFeature>"]] <- list(NULL,
# ,names = myreplacePunctuation(str_to_lower(gsub(" ", "", c(NULL,
# <comma-separated-screened-names>
# ))))
# ,rareWords = myreplacePunctuation(str_to_lower(gsub(" ", "", c(NULL,
# <comma-separated-nonSCOWL-words>
# ))))
#)
# Text Processing Step: custom modifications not present in txt_munge -> use glbFeatsDerive
# Text Processing Step: universal modifications
glb_txt_munge_filenames_pfx <- "<projectId>_mytxt_"
# Text Processing Step: tolower
# Text Processing Step: myreplacePunctuation
# Text Processing Step: removeWords
glb_txt_stop_words <- list()
# Remember to use unstemmed words
if (length(glbFeatsText) > 0) {
require(tm)
require(stringr)
glb_txt_stop_words[["<txt_var>"]] <- sort(myreplacePunctuation(str_to_lower(gsub(" ", "", c(NULL
# Remove any words from stopwords
# , setdiff(myreplacePunctuation(stopwords("english")), c("<keep_wrd1>", <keep_wrd2>"))
# Remove salutations
,"mr","mrs","dr","Rev"
# Remove misc
#,"th" # Happy [[:digit::]]+th birthday
# Remove terms present in Trn only or New only; search for "Partition post-stem"
# ,<comma-separated-terms>
# cor.y.train == NA
# ,unlist(strsplit(paste(c(NULL
# ,"<comma-separated-terms>"
# ), collapse=",")
# freq == 1; keep c("<comma-separated-terms-to-keep>")
# ,<comma-separated-terms>
# chisq.pval high (e.g. == 1); keep c("<comma-separated-terms-to-keep>")
# ,<comma-separated-terms>
# nzv.freqRatio high (e.g. >= glbFeatsNzvFreqMax); keep c("<comma-separated-terms-to-keep>")
# ,<comma-separated-terms>
)))))
}
#orderBy(~term, glb_post_stem_words_terms_df_lst[[txtFeat]][grep("^man", glb_post_stem_words_terms_df_lst[[txtFeat]]$term), ])
#glbObsAll[glb_post_stem_words_terms_mtrx_lst[[txtFeat]][, 4866] > 0, c(glb_rsp_var, txtFeat)]
# To identify terms with a specific freq
#paste0(sort(subset(glb_post_stop_words_terms_df_lst[[txtFeat]], freq == 1)$term), collapse = ",")
#paste0(sort(subset(glb_post_stem_words_terms_df_lst[[txtFeat]], freq <= 2)$term), collapse = ",")
#subset(glb_post_stem_words_terms_df_lst[[txtFeat]], term %in% c("zinger"))
# To identify terms with a specific freq &
# are not stemmed together later OR is value of color.fctr (e.g. gold)
#paste0(sort(subset(glb_post_stop_words_terms_df_lst[[txtFeat]], (freq == 1) & !(term %in% c("blacked","blemish","blocked","blocks","buying","cables","careful","carefully","changed","changing","chargers","cleanly","cleared","connect","connects","connected","contains","cosmetics","default","defaulting","defective","definitely","describe","described","devices","displays","drop","drops","engravement","excellant","excellently","feels","fix","flawlessly","frame","framing","gentle","gold","guarantee","guarantees","handled","handling","having","install","iphone","iphones","keeped","keeps","known","lights","line","lining","liquid","liquidation","looking","lots","manuals","manufacture","minis","most","mostly","network","networks","noted","opening","operated","performance","performs","person","personalized","photograph","physically","placed","places","powering","pre","previously","products","protection","purchasing","returned","rotate","rotation","running","sales","second","seconds","shipped","shuts","sides","skin","skinned","sticker","storing","thats","theres","touching","unusable","update","updates","upgrade","weeks","wrapped","verified","verify") ))$term), collapse = ",")
#print(subset(glb_post_stem_words_terms_df_lst[[txtFeat]], (freq <= 2)))
#glbObsAll[which(terms_mtrx[, 229] > 0), glbFeatsText]
# To identify terms with cor.y == NA
#orderBy(~-freq+term, subset(glb_post_stop_words_terms_df_lst[[txtFeat]], is.na(cor.y)))
#paste(sort(subset(glb_post_stop_words_terms_df_lst[[txtFeat]], is.na(cor.y))[, "term"]), collapse=",")
#orderBy(~-freq+term, subset(glb_post_stem_words_terms_df_lst[[txtFeat]], is.na(cor.y)))
# To identify terms with low cor.y.abs
#head(orderBy(~cor.y.abs+freq+term, subset(glb_post_stem_words_terms_df_lst[[txtFeat]], !is.na(cor.y))), 5)
# To identify terms with high chisq.pval
#subset(glb_post_stem_words_terms_df_lst[[txtFeat]], chisq.pval > 0.99)
#paste0(sort(subset(glb_post_stem_words_terms_df_lst[[txtFeat]], (chisq.pval > 0.99) & (freq <= 10))$term), collapse=",")
#paste0(sort(subset(glb_post_stem_words_terms_df_lst[[txtFeat]], (chisq.pval > 0.9))$term), collapse=",")
#head(orderBy(~-chisq.pval+freq+term, glb_post_stem_words_terms_df_lst[[txtFeat]]), 5)
#glbObsAll[glb_post_stem_words_terms_mtrx_lst[[txtFeat]][, 68] > 0, glbFeatsText]
#orderBy(~term, glb_post_stem_words_terms_df_lst[[txtFeat]][grep("^m", glb_post_stem_words_terms_df_lst[[txtFeat]]$term), ])
# To identify terms with high nzv.freqRatio
#summary(glb_post_stem_words_terms_df_lst[[txtFeat]]$nzv.freqRatio)
#paste0(sort(setdiff(subset(glb_post_stem_words_terms_df_lst[[txtFeat]], (nzv.freqRatio >= glbFeatsNzvFreqMax) & (freq < 10) & (chisq.pval >= 0.05))$term, c( "128gb","3g","4g","gold","ipad1","ipad3","ipad4","ipadair2","ipadmini2","manufactur","spacegray","sprint","tmobil","verizon","wifion"))), collapse=",")
# To identify obs with a txt term
#tail(orderBy(~-freq+term, glb_post_stop_words_terms_df_lst[[txtFeat]]), 20)
#mydspObs(list(descr.my.contains="non"), cols=c("color", "carrier", "cellular", "storage"))
#grep("ever", dimnames(terms_stop_mtrx)$Terms)
#which(terms_stop_mtrx[, grep("ipad", dimnames(terms_stop_mtrx)$Terms)] > 0)
#glbObsAll[which(terms_stop_mtrx[, grep("16", dimnames(terms_stop_mtrx)$Terms)[1]] > 0), c(glbFeatsCategory, "storage", txtFeat)]
# Text Processing Step: screen for names # Move to glbFeatsText specs section in order of text processing steps
# glbFeatsText[["<txtFeat>"]]$names <- myreplacePunctuation(str_to_lower(gsub(" ", "", c(NULL
# # Person names for names screening
# ,<comma-separated-list>
#
# # Company names
# ,<comma-separated-list>
#
# # Product names
# ,<comma-separated-list>
# ))))
# glbFeatsText[["<txtFeat>"]]$rareWords <- myreplacePunctuation(str_to_lower(gsub(" ", "", c(NULL
# # Words not in SCOWL db
# ,<comma-separated-list>
# ))))
# To identify char vectors post glbFeatsTextMap
#grep("six(.*)hour", glb_txt_chr_lst[[txtFeat]], ignore.case = TRUE, value = TRUE)
#grep("[S|s]ix(.*)[H|h]our", glb_txt_chr_lst[[txtFeat]], value = TRUE)
# To identify whether terms shd be synonyms
#orderBy(~term, glb_post_stop_words_terms_df_lst[[txtFeat]][grep("^moder", glb_post_stop_words_terms_df_lst[[txtFeat]]$term), ])
# term_row_df <- glb_post_stop_words_terms_df_lst[[txtFeat]][grep("^came$", glb_post_stop_words_terms_df_lst[[txtFeat]]$term), ]
#
# cor(glb_post_stop_words_terms_mtrx_lst[[txtFeat]][glbObsAll$.lcn == "Fit", term_row_df$pos], glbObsTrn[, glb_rsp_var], use="pairwise.complete.obs")
# To identify which stopped words are "close" to a txt term
#sort(glbFeatsCluster)
# Text Processing Step: stemDocument
# To identify stemmed txt terms
#glb_post_stop_words_terms_df_lst[[txtFeat]][grep("^la$", glb_post_stop_words_terms_df_lst[[txtFeat]]$term), ]
#orderBy(~term, glb_post_stem_words_terms_df_lst[[txtFeat]][grep("^con", glb_post_stem_words_terms_df_lst[[txtFeat]]$term), ])
#glbObsAll[which(terms_stem_mtrx[, grep("use", dimnames(terms_stem_mtrx)$Terms)[[1]]] > 0), c(glbFeatsId, "productline", txtFeat)]
#glbObsAll[which(TfIdf_stem_mtrx[, 191] > 0), c(glbFeatsId, glbFeatsCategory, txtFeat)]
#glbObsAll[which(glb_post_stop_words_terms_mtrx_lst[[txtFeat]][, 6165] > 0), c(glbFeatsId, glbFeatsCategory, txtFeat)]
#which(glbObsAll$UniqueID %in% c(11915, 11926, 12198))
# Text Processing Step: mycombineSynonyms
# To identify which terms are associated with not -> combine "could not" & "couldn't"
#findAssocs(glb_full_DTM_lst[[txtFeat]], "not", 0.05)
# To identify which synonyms should be combined
#orderBy(~term, glb_post_stem_words_terms_df_lst[[txtFeat]][grep("^c", glb_post_stem_words_terms_df_lst[[txtFeat]]$term), ])
chk_comb_cor <- function(syn_lst) {
# cor(terms_stem_mtrx[glbObsAll$.src == "Train", grep("^(damag|dent|ding)$", dimnames(terms_stem_mtrx)[[2]])], glbObsTrn[, glb_rsp_var], use="pairwise.complete.obs")
print(subset(glb_post_stem_words_terms_df_lst[[txtFeat]], term %in% syn_lst$syns))
print(subset(get_corpus_terms(tm_map(glbFeatsTextCorpus[[txtFeat]], mycombineSynonyms, list(syn_lst), lazy=FALSE)), term == syn_lst$word))
# cor(terms_stop_mtrx[glbObsAll$.src == "Train", grep("^(damage|dent|ding)$", dimnames(terms_stop_mtrx)[[2]])], glbObsTrn[, glb_rsp_var], use="pairwise.complete.obs")
# cor(rowSums(terms_stop_mtrx[glbObsAll$.src == "Train", grep("^(damage|dent|ding)$", dimnames(terms_stop_mtrx)[[2]])]), glbObsTrn[, glb_rsp_var], use="pairwise.complete.obs")
}
#chk_comb_cor(syn_lst=list(word="cabl", syns=c("cabl", "cord")))
#chk_comb_cor(syn_lst=list(word="damag", syns=c("damag", "dent", "ding")))
#chk_comb_cor(syn_lst=list(word="dent", syns=c("dent", "ding")))
#chk_comb_cor(syn_lst=list(word="use", syns=c("use", "usag")))
glbFeatsTextSynonyms <- list()
# list parsed to collect glbFeatsText[[<txtFeat>]]$vldTerms
# glbFeatsTextSynonyms[["Hdln.my"]] <- list(NULL
# # people in places
# , list(word = "australia", syns = c("australia", "australian"))
# , list(word = "italy", syns = c("italy", "Italian"))
# , list(word = "newyork", syns = c("newyork", "newyorker"))
# , list(word = "Pakistan", syns = c("Pakistan", "Pakistani"))
# , list(word = "peru", syns = c("peru", "peruvian"))
# , list(word = "qatar", syns = c("qatar", "qatari"))
# , list(word = "scotland", syns = c("scotland", "scotish"))
# , list(word = "Shanghai", syns = c("Shanghai", "Shanzhai"))
# , list(word = "venezuela", syns = c("venezuela", "venezuelan"))
#
# # companies - needs to be data dependent
# # - e.g. ensure BNP in this experiment/feat always refers to BNPParibas
#
# # general synonyms
# , list(word = "Create", syns = c("Create","Creator"))
# , list(word = "cute", syns = c("cute","cutest"))
# , list(word = "Disappear", syns = c("Disappear","Fadeout"))
# , list(word = "teach", syns = c("teach", "taught"))
# , list(word = "theater", syns = c("theater", "theatre", "theatres"))
# , list(word = "understand", syns = c("understand", "understood"))
# , list(word = "weak", syns = c("weak", "weaken", "weaker", "weakest"))
# , list(word = "wealth", syns = c("wealth", "wealthi"))
#
# # custom synonyms (phrases)
#
# # custom synonyms (names)
# )
#glbFeatsTextSynonyms[["<txtFeat>"]] <- list(NULL
# , list(word="<stem1>", syns=c("<stem1>", "<stem1_2>"))
# )
for (txtFeat in names(glbFeatsTextSynonyms))
for (entryIx in 1:length(glbFeatsTextSynonyms[[txtFeat]])) {
glbFeatsTextSynonyms[[txtFeat]][[entryIx]]$word <-
str_to_lower(glbFeatsTextSynonyms[[txtFeat]][[entryIx]]$word)
glbFeatsTextSynonyms[[txtFeat]][[entryIx]]$syns <-
str_to_lower(glbFeatsTextSynonyms[[txtFeat]][[entryIx]]$syns)
}
glbFeatsTextSeed <- 181
# tm options include: check tm::weightSMART
glb_txt_terms_control <- list( # Gather model performance & run-time stats
# weighting = function(x) weightSMART(x, spec = "nnn")
# weighting = function(x) weightSMART(x, spec = "lnn")
# weighting = function(x) weightSMART(x, spec = "ann")
# weighting = function(x) weightSMART(x, spec = "bnn")
# weighting = function(x) weightSMART(x, spec = "Lnn")
#
weighting = function(x) weightSMART(x, spec = "ltn") # default
# weighting = function(x) weightSMART(x, spec = "lpn")
#
# weighting = function(x) weightSMART(x, spec = "ltc")
#
# weighting = weightBin
# weighting = weightTf
# weighting = weightTfIdf # : default
# termFreq selection criteria across obs: tm default: list(global=c(1, Inf))
, bounds = list(global = c(1, Inf))
# wordLengths selection criteria: tm default: c(3, Inf)
, wordLengths = c(1, Inf)
)
glb_txt_cor_var <- glb_rsp_var # : default # or c(<feat>)
# select one from c("union.top.val.cor", "top.cor", "top.val", default: "top.chisq", "sparse")
glbFeatsTextFilter <- "top.chisq"
glbFeatsTextTermsMax <- rep(10, length(glbFeatsText)) # :default
names(glbFeatsTextTermsMax) <- names(glbFeatsText)
# Text Processing Step: extractAssoc
glbFeatsTextAssocCor <- rep(1, length(glbFeatsText)) # :default
names(glbFeatsTextAssocCor) <- names(glbFeatsText)
# Remember to use stemmed terms
glb_important_terms <- list()
# Text Processing Step: extractPatterns (ngrams)
glbFeatsTextPatterns <- list()
#glbFeatsTextPatterns[[<txtFeat>>]] <- list()
#glbFeatsTextPatterns[[<txtFeat>>]] <- c(metropolitan.diary.colon = "Metropolitan Diary:")
# Have to set it even if it is not used
# Properties:
# numrows(glb_feats_df) << numrows(glbObsFit
# Select terms that appear in at least 0.2 * O(FP/FN(glbObsOOB)) ???
# numrows(glbObsOOB) = 1.1 * numrows(glbObsNew) ???
glb_sprs_thresholds <- NULL # or c(<txtFeat1> = 0.988, <txtFeat2> = 0.970, <txtFeat3> = 0.970)
glbFctrMaxUniqVals <- 20 # default: 20
glb_impute_na_data <- FALSE # or TRUE
glb_mice_complete.seed <- 144 # or any integer
glbFeatsCluster <- paste(grep("^Q.", glbFeatsExclude, value = TRUE), "fctr", sep = ".") # NULL : glbFeatsCluster <- c("YOB.Age.fctr", "Gender.fctr", "Income.fctr",
# # "Hhold.fctr",
# "Edn.fctr",
# paste(grep("^Q.", glbFeatsExclude, value = TRUE), "fctr", sep = ".")) # NULL : default or c("<feat1>", "<feat2>")
# glbFeatsCluster <- grep(paste0("[",
# toupper(paste0(substr(glbFeatsText, 1, 1), collapse = "")),
# "]\\.[PT]\\."),
# names(glbObsAll), value = TRUE)
glb_cluster.seed <- 189 # or any integer
glbClusterEntropyVar <- NULL # c(glb_rsp_var, as.factor(cut(glb_rsp_var, 3)), default: NULL)
glbFeatsClusterVarsExclude <- FALSE # default FALSE
glb_interaction_only_feats <- NULL # : default or c(<parent_feat> = "<child_feat>")
glbFeatsNzvFreqMax <- 19 # 19 : caret default
glbFeatsNzvUniqMin <- 10 # 10 : caret default
glbRFESizes <- list()
#glbRFESizes[["mdlFamily"]] <- c(4, 8, 16, 32, 64, 67, 68, 69) # Accuracy@69/70 = 0.8258
glbRFESizes[["RFE.X"]] <- c(4, 6, 7, 8, 9, 10, 16, 32, 64, 128, 253) # accuracy(8) = 0.5648
# glbRFESizes[["Final"]] <- c(8, 16, 32, 40, 44, 46, 48, 49, 50, 51, 52, 56, 64, 96, 128, 247) # accuracy(49) = 0.6164
glbRFEResults <- NULL
glbObsFitOutliers <- list()
# If outliers.n >= 10; consider concatenation of interaction vars
# glbObsFitOutliers[["<mdlFamily>"]] <- c(NULL
# is.na(.rstudent)
# max(.rstudent)
# is.na(.dffits)
# .hatvalues >= 0.99
# -38,167,642 < minmax(.rstudent) < 49,649,823
# , <comma-separated-<glbFeatsId>>
# )
glbObsTrnOutliers <- list()
glbObsTrnOutliers[["Final"]] <- union(glbObsFitOutliers[["All.X"]],
c(NULL
))
# Modify mdlId to (build & extract) "<FamilyId>#<Fit|Trn>#<caretMethod>#<preProc1.preProc2>#<samplingMethod>"
glb_models_lst <- list(); glb_models_df <- data.frame()
# Add xgboost algorithm
# Regression
if (glb_is_regression) {
glbMdlMethods <- c(NULL
# deterministic
#, "lm", # same as glm
, "glm", "bayesglm", "glmnet"
, "rpart"
# non-deterministic
, "gbm", "rf"
# Unknown
, "nnet" , "avNNet" # runs 25 models per cv sample for tunelength=5
, "svmLinear", "svmLinear2"
, "svmPoly" # runs 75 models per cv sample for tunelength=5
, "svmRadial"
, "earth"
, "bagEarth" # Takes a long time
,"xgbLinear","xgbTree"
)
} else
# Classification - Add ada (auto feature selection)
if (glb_is_binomial)
glbMdlMethods <- c(NULL
# deterministic
, "bagEarth" # Takes a long time
, "glm", "bayesglm", "glmnet"
, "nnet"
, "rpart"
# non-deterministic
, "gbm"
, "avNNet" # runs 25 models per cv sample for tunelength=5
, "rf"
# Unknown
, "lda", "lda2"
# svm models crash when predict is called -> internal to kernlab it should call predict without .outcome
, "svmLinear", "svmLinear2"
, "svmPoly" # runs 75 models per cv sample for tunelength=5
, "svmRadial"
, "earth"
,"xgbLinear","xgbTree"
) else
glbMdlMethods <- c(NULL
# deterministic
,"glmnet"
# non-deterministic
,"rf"
# Unknown
,"gbm","rpart","xgbLinear","xgbTree"
)
glbMdlFamilies <- list(); glb_mdl_feats_lst <- list()
# family: Choose from c("RFE.X", "Csm.X", "All.X", "Best.Interact") %*% c(NUll, ".NOr", ".Inc")
# RFE = "Recursive Feature Elimination"
# Csm = CuStoM
# NOr = No OutlieRs
# Inc = INteraCt
# methods: Choose from c(NULL, <method>, glbMdlMethods)
#glbMdlFamilies[["RFE.X"]] <- c("glmnet", "glm") # non-NULL vector is mandatory
if (glb_is_classification && !glb_is_binomial) {
# glm does not work for multinomial
glbMdlFamilies[["All.X"]] <- c("glmnet")
} else {
# glbMdlFamilies[["All.X"]] <- c("glmnet", "glm")
# glbMdlFamilies[["All.X"]] <- c("glmnet")
glbMdlFamilies[["All.X"]] <- setdiff(glbMdlMethods, c(NULL
# , "bayesglm" # error: Error in trControl$classProbs && any(classLevels != make.names(classLevels)) : invalid 'x' type in 'x && y'
, "lda" # error: model fit failed for Fold1.Rep1: parameter=none Error in lda.default(x, grouping, ...)
,"lda2" # error: There were missing values in resampled performance measures.
, "svmLinear" # Error in .local(object, ...) : test vector does not match model ! In addition: Warning messages:
, "svmLinear2" # SVM has not been trained using `probability = TRUE`, probabilities not available for predictions
, "svmPoly" # runs 75 models per cv sample for tunelength=5 # took > 2 hrs # Error in .local(object, ...) : test vector does not match model !
, "svmRadial" # Error in .local(object, ...) : test vector does not match model !
,"xgbLinear","xgbTree" # Need clang-omp compiler; Upgrade to Revolution R 3.2.3 (3.2.2 current); https://github.com/dmlc/xgboost/issues/276 thread
))
# glbMdlFamilies[["RFE.X"]] <- c("glmnet", "glm")
glbMdlFamilies[["RFE.X"]] <- c("glmnet")
# glbMdlFamilies[["RFE.X"]] <- setdiff(glbMdlMethods, c(NULL
# # , "bayesglm" # error: Error in trControl$classProbs && any(classLevels != make.names(classLevels)) : invalid 'x' type in 'x && y'
# # , "lda","lda2" # error: Error in lda.default(x, grouping, ...) : variable 236 appears to be constant within groups
# , "svmLinear" # Error in .local(object, ...) : test vector does not match model ! In addition: Warning messages:
# , "svmLinear2" # SVM has not been trained using `probability = TRUE`, probabilities not available for predictions
# , "svmPoly" # runs 75 models per cv sample for tunelength=5 # took > 2 hrs # Error in .local(object, ...) : test vector does not match model !
# , "svmRadial" # Error in .local(object, ...) : test vector does not match model !
# ,"xgbLinear","xgbTree" # Need clang-omp compiler; Upgrade to Revolution R 3.2.3 (3.2.2 current); https://github.com/dmlc/xgboost/issues/276 thread
# ))
}
# glbMdlFamilies[["All.X.Inc"]] <- glbMdlFamilies[["All.X"]] # value not used
# glbMdlFamilies[["RFE.X.Inc"]] <- glbMdlFamilies[["RFE.X"]] # value not used
# Check if interaction features make RFE better
# glbMdlFamilies[["CSM.X"]] <- setdiff(glbMdlMethods, c("lda", "lda2")) # crashing due to category:.clusterid ??? #c("glmnet", "glm") # non-NULL list is mandatory
# glb_mdl_feats_lst[["CSM.X"]] <- c(NULL
# , <comma-separated-features-vector>
# )
# dAFeats.CSM.X %<d-% c(NULL
# # Interaction feats up to varImp(RFE.X.glmnet) >= 50
# , <comma-separated-features-vector>
# , setdiff(myextract_actual_feats(predictors(glbRFEResults)), c(NULL
# , <comma-separated-features-vector>
# ))
# )
# glb_mdl_feats_lst[["CSM.X"]] <- "%<d-% dAFeats.CSM.X"
# glbMdlFamilies[["Final"]] <- c(NULL) # NULL vector acceptable # c("glmnet", "glm")
glbMdlAllowParallel <- list()
#glbMdlAllowParallel[["Final##rcv#glmnet"]] <- FALSE
glbMdlAllowParallel[["All.X##rcv#bayesglm"]] <- FALSE
glbMdlAllowParallel[["All.X##rcv#glm"]] <- FALSE
glbMdlAllowParallel[["All.X##rcv#lda"]] <- FALSE
glbMdlAllowParallel[["All.X##rcv#rpart"]] <- FALSE
glbMdlAllowParallel[["All.X#ica#rcv#glmnet"]] <- FALSE
glbMdlAllowParallel[["All.X#zv.pca#rcv#glmnet"]] <- FALSE
glbMdlAllowParallel[["All.X#zv.YeoJohnson.pca#rcv#glmnet"]] <- FALSE
# Check if tuning parameters make fit better; make it mdlFamily customizable ?
glbMdlTuneParams <- data.frame()
# When glmnet crashes at model$grid with error: ???
AllX__rcv_glmnetTuneParams <- rbind(data.frame() # alpha shd be <= 1.0 ALWAYS
,data.frame(parameter = "alpha", vals = "0.100 0.325 0.550 0.775 1.000")
,data.frame(parameter = "lambda", vals = "0.0053781495 0.01 0.0249631588 0.03 0.04454817")
) # max.Accuracy.OOB = 0.5981941 @ 0.775 0.02496316
AllX_YeoJohnson_rcv_glmnetTuneParams <- rbind(data.frame()
,data.frame(parameter = "alpha", vals = "0.100 0.325 0.550 0.775 1.000")
,data.frame(parameter = "lambda", vals = "0.0053781495 0.01 0.0249631588 0.03 0.04454817")
) # max.Accuracy.OOB = 0.6004515 @ 0.775 0.02496316
AllX_zvpca_rcv_glmnetTuneParams <- rbind(data.frame()
,data.frame(parameter = "alpha", vals = "0.325 0.550 0.775 0.9 1.000")
,data.frame(parameter = "lambda", vals = "1.040899e-03 0.003 4.831424e-03 0.01 2.242548e-02")
) # max.Accuracy.OOB = 0.6185102 @ 1.0 0.004831424
# 0.616408 @ 0.9 0.004831424
glbMdlTuneParams <- rbind(glbMdlTuneParams
,cbind(data.frame(mdlId = "All.X##rcv#glmnet"), AllX__rcv_glmnetTuneParams)
,cbind(data.frame(mdlId = "All.X#YeoJohnson#rcv#glmnet"),
AllX_YeoJohnson_rcv_glmnetTuneParams) ,cbind(data.frame(mdlId = "All.X#zv.pca#rcv#glmnet"),
AllX_zvpca_rcv_glmnetTuneParams)
)
#avNNet
# size=[1] 3 5 7 9; decay=[0] 1e-04 0.001 0.01 0.1; bag=[FALSE]; RMSE=1.3300906
#bagEarth
# degree=1 [2] 3; nprune=64 128 256 512 [1024]; RMSE=0.6486663 (up)
# bagEarthTuneParams <- rbind(data.frame()
# ,data.frame(parameter = "degree", vals = "1")
# ,data.frame(parameter = "nprune", vals = "256")
# )
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams,
# cbind(data.frame(mdlId = "Final.RFE.X.Inc##rcv#bagEarth"),
# bagEarthTuneParams))
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "bagEarth", parameter = "nprune", vals = "256")
# ,data.frame(method = "bagEarth", parameter = "degree", vals = "2")
# ))
#earth
# degree=[1]; nprune=2 [9] 17 25 33; RMSE=0.1334478
#gbm
# shrinkage=0.05 [0.10] 0.15 0.20 0.25; n.trees=100 150 200 [250] 300; interaction.depth=[1] 2 3 4 5; n.minobsinnode=[10]; RMSE=0.2008313
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "gbm", parameter = "shrinkage", min = 0.05, max = 0.25, by = 0.05)
# ,data.frame(method = "gbm", parameter = "n.trees", min = 100, max = 300, by = 50)
# ,data.frame(method = "gbm", parameter = "interaction.depth", min = 1, max = 5, by = 1)
# ,data.frame(method = "gbm", parameter = "n.minobsinnode", min = 10, max = 10, by = 10)
# #seq(from=0.05, to=0.25, by=0.05)
# ))
#glmnet
# alpha=0.100 [0.325] 0.550 0.775 1.000; lambda=0.0005232693 0.0024288010 0.0112734954 [0.0523269304] 0.2428800957; RMSE=0.6164891
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "glmnet", parameter = "alpha", vals = "0.550 0.775 0.8875 0.94375 1.000")
# ,data.frame(method = "glmnet", parameter = "lambda", vals = "9.858855e-05 0.0001971771 0.0009152152 0.0042480525 0.0197177130")
# ))
#nnet
# size=3 5 [7] 9 11; decay=0.0001 0.001 0.01 [0.1] 0.2; RMSE=0.9287422
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "nnet", parameter = "size", vals = "3 5 7 9 11")
# ,data.frame(method = "nnet", parameter = "decay", vals = "0.0001 0.0010 0.0100 0.1000 0.2000")
# ))
#rf # Don't bother; results are not deterministic
# mtry=2 35 68 [101] 134; RMSE=0.1339974
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "rf", parameter = "mtry", vals = "2 5 9 13 17")
# ))
#rpart
# cp=0.020 [0.025] 0.030 0.035 0.040; RMSE=0.1770237
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "rpart", parameter = "cp", vals = "0.004347826 0.008695652 0.017391304 0.021739130 0.034782609")
# ))
#svmLinear
# C=0.01 0.05 [0.10] 0.50 1.00 2.00 3.00 4.00; RMSE=0.1271318; 0.1296718
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "svmLinear", parameter = "C", vals = "0.01 0.05 0.1 0.5 1")
# ))
#svmLinear2
# cost=0.0625 0.1250 [0.25] 0.50 1.00; RMSE=0.1276354
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method = "svmLinear2", parameter = "cost", vals = "0.0625 0.125 0.25 0.5 1")
# ))
#svmPoly
# degree=[1] 2 3 4 5; scale=0.01 0.05 [0.1] 0.5 1; C=0.50 1.00 [2.00] 3.00 4.00; RMSE=0.1276130
# glbMdlTuneParams <- myrbind_df(glbMdlTuneParams, rbind(data.frame()
# ,data.frame(method="svmPoly", parameter="degree", min=1, max=5, by=1) #seq(1, 5, 1)
# ,data.frame(method="svmPoly", parameter="scale", vals="0.01, 0.05, 0.1, 0.5, 1")
# ,data.frame(method="svmPoly", parameter="C", vals="0.50, 1.00, 2.00, 3.00, 4.00")
# ))
#svmRadial
# sigma=[0.08674323]; C=0.25 0.50 1.00 [2.00] 4.00; RMSE=0.1614957
#glb2Sav(); all.equal(sav_models_df, glb_models_df)
pkgPreprocMethods <-
# caret version: 6.0.068 # packageVersion("caret")
# operations are applied in this order: zero-variance filter, near-zero variance filter, Box-Cox/Yeo-Johnson/exponential transformation, centering, scaling, range, imputation, PCA, ICA then spatial sign
# *Impute methods needed only if NAs are fed to myfit_mdl
# Also, ordered.factor in caret creates features as Edn.fctr^4 which is treated as an exponent by bagImpute
c(NULL
,"zv", "nzv"
,"BoxCox", "YeoJohnson", "expoTrans"
,"center", "scale", "center.scale", "range"
,"knnImpute", "bagImpute", "medianImpute"
,"zv.pca", "ica", "spatialSign"
,"conditionalX")
glbMdlPreprocMethods <- list(NULL # NULL # : default
,"All.X" = list("glmnet" = union(setdiff(pkgPreprocMethods,
c("knnImpute", "bagImpute", "medianImpute")),
# c(NULL)))
c("zv.YeoJohnson.pca")))
# ,"RFE.X" = list("glmnet" = union(setdiff(pkgPreprocMethods,
# c("knnImpute", "bagImpute", "medianImpute")),
# c(NULL)))
# # c("zv.pca.spatialSign")))
)
# glbMdlPreprocMethods[["RFE.X"]] <- list("glmnet" = union(unlist(glbMdlPreprocMethods[["All.X"]]),
# "nzv.pca.spatialSign"))
# Baseline prediction model feature(s)
glb_Baseline_mdl_var <- NULL # or c("<feat>")
glbMdlMetric_terms <- NULL # or matrix(c(
# 0,1,2,3,4,
# 2,0,1,2,3,
# 4,2,0,1,2,
# 6,4,2,0,1,
# 8,6,4,2,0
# ), byrow=TRUE, nrow=5)
glbMdlMetricSummary <- NULL # or "<metric_name>"
glbMdlMetricMaximize <- NULL # or FALSE (TRUE is not the default for both classification & regression)
glbMdlMetricSummaryFn <- NULL # or function(data, lev=NULL, model=NULL) {
# confusion_mtrx <- t(as.matrix(confusionMatrix(data$pred, data$obs)))
# #print(confusion_mtrx)
# #print(confusion_mtrx * glbMdlMetric_terms)
# metric <- sum(confusion_mtrx * glbMdlMetric_terms) / nrow(data)
# names(metric) <- glbMdlMetricSummary
# return(metric)
# }
glbMdlCheckRcv <- FALSE # Turn it on when needed; otherwise takes long time
glb_rcv_n_folds <- 3 # or NULL
glb_rcv_n_repeats <- 3 # or NULL
glb_clf_proba_threshold <- NULL # 0.5
# Model selection criteria
if (glb_is_regression)
glbMdlMetricsEval <- c("min.RMSE.OOB", "max.R.sq.OOB", "min.elapsedtime.everything",
"max.Adj.R.sq.fit", "min.RMSE.fit")
#glbMdlMetricsEval <- c("min.RMSE.fit", "max.R.sq.fit", "max.Adj.R.sq.fit")
if (glb_is_classification) {
if (glb_is_binomial)
glbMdlMetricsEval <-
c("max.Accuracy.OOB", "max.AUCROCR.OOB", "max.AUCpROC.OOB",
"min.elapsedtime.everything",
# "min.aic.fit",
"max.Accuracy.fit") else
glbMdlMetricsEval <- c("max.Accuracy.OOB", "max.Kappa.OOB", "min.elapsedtime.everything")
}
# select from NULL [no ensemble models], "auto" [all models better than MFO or Baseline], c(mdl_ids in glb_models_lst) [Typically top-rated models in auto]
glbMdlEnsemble <- "auto" # NULL : default #"auto"
# "%<d-% setdiff(mygetEnsembleAutoMdlIds(), 'CSM.X.rf')"
# c(<comma-separated-mdlIds>
# )
glbMdlEnsembleSampleMethods <- c("boot", "boot632", "cv", "repeatedcv"
# , "LOOCV" # tuneLength * nrow(fitDF) # way too many models
, "LGOCV"
, "adaptive_cv" # crashed for Q109244No
# , "adaptive_boot" #error: adaptive$min should be less than 3
# , "adaptive_LGOCV" #error: adaptive$min should be less than 3
)
# Only for classifications; for regressions remove "(.*)\\.prob" form the regex
# tmp_fitobs_df <- glbObsFit[, grep(paste0("^", gsub(".", "\\.", mygetPredictIds$value, fixed = TRUE), "CSM\\.X\\.(.*)\\.prob"), names(glbObsFit), value = TRUE)]; cor_mtrx <- cor(tmp_fitobs_df); cor_vctr <- sort(cor_mtrx[row.names(orderBy(~-Overall, varImp(glb_models_lst[["Ensemble.repeatedcv.glmnet"]])$imp))[1], ]); summary(cor_vctr); cor_vctr
#ntv.glm <- glm(reformulate(indepVar, glb_rsp_var), family = "binomial", data = glbObsFit)
#step.glm <- step(ntv.glm)
glbMdlSelId <- NULL #select from c(NULL, "All.X##rcv#glmnet", "RFE.X##rcv#glmnet", <mdlId>)
glbMdlFinId <- NULL #select from c(NULL, glbMdlSelId)
glb_dsp_cols <- c(".pos", glbFeatsId, glbFeatsCategory, glb_rsp_var
# List critical cols excl. above
)
# Output specs
# lclgetfltout_df <- function(obsOutFinDf) {
# require(tidyr)
# obsOutFinDf <- obsOutFinDf %>%
# tidyr::separate("ImageId.x.y", c(".src", ".pos", "x", "y"),
# sep = "#", remove = TRUE, extra = "merge")
# # mnm prefix stands for max_n_mean
# mnmout_df <- obsOutFinDf %>%
# dplyr::group_by(.pos) %>%
# #dplyr::top_n(1, Probability1) %>% # Score = 3.9426
# #dplyr::top_n(2, Probability1) %>% # Score = ???; weighted = 3.94254;
# #dplyr::top_n(3, Probability1) %>% # Score = 3.9418; weighted = 3.94169;
# dplyr::top_n(4, Probability1) %>% # Score = ???; weighted = 3.94149;
# #dplyr::top_n(5, Probability1) %>% # Score = 3.9421; weighted = 3.94178
#
# # dplyr::summarize(xMeanN = mean(as.numeric(x)), yMeanN = mean(as.numeric(y)))
# # dplyr::summarize(xMeanN = weighted.mean(as.numeric(x), Probability1), yMeanN = mean(as.numeric(y)))
# # dplyr::summarize(xMeanN = weighted.mean(as.numeric(x), c(Probability1, 0.2357323, 0.2336925)), yMeanN = mean(as.numeric(y)))
# # dplyr::summarize(xMeanN = weighted.mean(as.numeric(x), c(Probability1)), yMeanN = mean(as.numeric(y)))
# dplyr::summarize(xMeanN = weighted.mean(as.numeric(x), c(Probability1)),
# yMeanN = weighted.mean(as.numeric(y), c(Probability1)))
#
# maxout_df <- obsOutFinDf %>%
# dplyr::group_by(.pos) %>%
# dplyr::summarize(maxProb1 = max(Probability1))
# fltout_df <- merge(maxout_df, obsOutFinDf,
# by.x = c(".pos", "maxProb1"), by.y = c(".pos", "Probability1"),
# all.x = TRUE)
# fmnout_df <- merge(fltout_df, mnmout_df,
# by.x = c(".pos"), by.y = c(".pos"),
# all.x = TRUE)
# return(fmnout_df)
# }
glbObsOut <- list(NULL
# glbFeatsId will be the first output column, by default
,vars = list()
# ,mapFn = function(obsOutFinDf) {
# }
)
#obsOutFinDf <- savobsOutFinDf
# glbObsOut$mapFn <- function(obsOutFinDf) {
# txfout_df <- dplyr::select(obsOutFinDf, -.pos.y) %>%
# dplyr::mutate(
# lunch = levels(glbObsTrn[, "lunch" ])[
# round(mean(as.numeric(glbObsTrn[, "lunch" ])), 0)],
# dinner = levels(glbObsTrn[, "dinner" ])[
# round(mean(as.numeric(glbObsTrn[, "dinner" ])), 0)],
# reserve = levels(glbObsTrn[, "reserve" ])[
# round(mean(as.numeric(glbObsTrn[, "reserve" ])), 0)],
# outdoor = levels(glbObsTrn[, "outdoor" ])[
# round(mean(as.numeric(glbObsTrn[, "outdoor" ])), 0)],
# expensive = levels(glbObsTrn[, "expensive"])[
# round(mean(as.numeric(glbObsTrn[, "expensive"])), 0)],
# liquor = levels(glbObsTrn[, "liquor" ])[
# round(mean(as.numeric(glbObsTrn[, "liquor" ])), 0)],
# table = levels(glbObsTrn[, "table" ])[
# round(mean(as.numeric(glbObsTrn[, "table" ])), 0)],
# classy = levels(glbObsTrn[, "classy" ])[
# round(mean(as.numeric(glbObsTrn[, "classy" ])), 0)],
# kids = levels(glbObsTrn[, "kids" ])[
# round(mean(as.numeric(glbObsTrn[, "kids" ])), 0)]
# )
#
# print("ObsNew output class tables:")
# print(sapply(c("lunch","dinner","reserve","outdoor",
# "expensive","liquor","table",
# "classy","kids"),
# function(feat) table(txfout_df[, feat], useNA = "ifany")))
#
# txfout_df <- txfout_df %>%
# dplyr::mutate(labels = "") %>%
# dplyr::mutate(labels =
# ifelse(lunch != "-1", paste(labels, lunch ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(dinner != "-1", paste(labels, dinner ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(reserve != "-1", paste(labels, reserve ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(outdoor != "-1", paste(labels, outdoor ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(expensive != "-1", paste(labels, expensive), labels)) %>%
# dplyr::mutate(labels =
# ifelse(liquor != "-1", paste(labels, liquor ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(table != "-1", paste(labels, table ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(classy != "-1", paste(labels, classy ), labels)) %>%
# dplyr::mutate(labels =
# ifelse(kids != "-1", paste(labels, kids ), labels)) %>%
# dplyr::select(business_id, labels)
# return(txfout_df)
# }
#if (!is.null(glbObsOut$mapFn)) obsOutFinDf <- glbObsOut$mapFn(obsOutFinDf); print(head(obsOutFinDf))
glb_out_obs <- NULL # select from c(NULL : default to "new", "all", "new", "trn")
if (glb_is_classification && glb_is_binomial) {
# glbObsOut$vars[["Probability1"]] <-
# "%<d-% glbObsNew[, mygetPredictIds(glb_rsp_var, glbMdlFinId)$prob]"
# glbObsOut$vars[[glb_rsp_var_raw]] <-
# "%<d-% glb_map_rsp_var_to_raw(glbObsNew[,
# mygetPredictIds(glb_rsp_var, glbMdlFinId)$value])"
glbObsOut$vars[["Predictions"]] <-
"%<d-% glb_map_rsp_var_to_raw(glbObsNew[,
mygetPredictIds(glb_rsp_var, glbMdlFinId)$value])"
} else {
# glbObsOut$vars[[glbFeatsId]] <-
# "%<d-% as.integer(gsub('Test#', '', glbObsNew[, glbFeatsId]))"
glbObsOut$vars[[glb_rsp_var]] <-
"%<d-% glbObsNew[, mygetPredictIds(glb_rsp_var, glbMdlFinId)$value]"
# for (outVar in setdiff(glbFeatsExcludeLcl, glb_rsp_var_raw))
# glbObsOut$vars[[outVar]] <-
# paste0("%<d-% mean(glbObsAll[, \"", outVar, "\"], na.rm = TRUE)")
}
# glbObsOut$vars[[glb_rsp_var_raw]] <- glb_rsp_var_raw
# glbObsOut$vars[[paste0(head(unlist(strsplit(mygetPredictIds$value, "")), -1), collapse = "")]] <-
glbOutStackFnames <- # NULL #: default
c("Q109244No_AllXpreProc_cnk03_rest_out_fin.csv")
# c("Votes_Ensemble_cnk06_out_fin.csv")
glbOut <- list(pfx = "Q109244NA_Ensemble_cnk03_rest_")
# lclImageSampleSeed <- 129
glbOutDataVizFname <- NULL # choose from c(NULL, "<projectId>_obsall.csv")
glbChunks <- list(labels = c("set_global_options_wd","set_global_options"
,"import.data","inspect.data","scrub.data","transform.data"
,"extract.features"
,"extract.features.datetime","extract.features.image","extract.features.price"
,"extract.features.text","extract.features.string"
,"extract.features.end"
,"manage.missing.data","cluster.data","partition.data.training","select.features"
,"fit.models_0","fit.models_1","fit.models_2","fit.models_3"
,"fit.data.training_0","fit.data.training_1"
,"predict.data.new"
,"display.session.info"))
# To ensure that all chunks in this script are in glbChunks
if (!is.null(chkChunksLabels <- knitr::all_labels()) && # knitr::all_labels() doesn't work in console runs
!identical(chkChunksLabels, glbChunks$labels)) {
print(sprintf("setdiff(chkChunksLabels, glbChunks$labels): %s",
setdiff(chkChunksLabels, glbChunks$labels)))
print(sprintf("setdiff(glbChunks$labels, chkChunksLabels): %s",
setdiff(glbChunks$labels, chkChunksLabels)))
}
glbChunks[["first"]] <- "fit.models_2" # NULL # default: script will load envir from previous chunk
glbChunks[["last" ]] <- NULL # default: script will save envir at end of this chunk
glbChunks[["inpFilePathName"]] <- "data/Q109244NA_Ensemble_Prep_fit.models_1_fit.models_1.RData" # NULL: default or "data/<prvScriptName>_<lstChunkLbl>.RData"
#mysavChunk(glbOut$pfx, glbChunks[["last"]]) # called from myevlChunk
# Temporary: Delete this function (if any) from here after appropriate .RData file is saved
# Inspect max OOB FP
#chkObsOOB <- subset(glbObsOOB, !label.fctr.All.X..rcv.glmnet.is.acc)
#chkObsOOBFP <- subset(chkObsOOB, label.fctr.All.X..rcv.glmnet == "left_eye_center") %>% dplyr::mutate(Probability1 = label.fctr.All.X..rcv.glmnet.prob) %>% select(-.src, -.pos, -x, -y) %>% lclgetfltout_df() %>% mutate(obj.distance = (((as.numeric(x) - left_eye_center_x.int) ^ 2) + ((as.numeric(y) - left_eye_center_y.int) ^ 2)) ^ 0.5) %>% dplyr::top_n(5, obj.distance) %>% dplyr::top_n(5, -patch.cor)
#
#newImgObs <- glbObsNew[(glbObsNew$ImageId == "Test#0001"), ]; print(newImgObs[which.max(newImgObs$label.fctr.Final..rcv.glmnet.prob), ])
#OOBImgObs <- glbObsOOB[(glbObsOOB$ImageId == "Train#0003"), ]; print(OOBImgObs[which.max(OOBImgObs$label.fctr.All.X..rcv.glmnet.prob), ])
#mygetImage(which(glbObsAll[, glbFeatsId] == "Train#0003"), names(glbFeatsImage)[1], plot = TRUE, featHighlight = c("left_eye_center_x", "left_eye_center_y"), ovrlHighlight = c(66, 35))
# Depict process
glb_analytics_pn <- petrinet(name = "glb_analytics_pn",
trans_df = data.frame(id = 1:6,
name = c("data.training.all","data.new",
"model.selected","model.final",
"data.training.all.prediction","data.new.prediction"),
x=c( -5,-5,-15,-25,-25,-35),
y=c( -5, 5, 0, 0, -5, 5)
),
places_df=data.frame(id=1:4,
name=c("bgn","fit.data.training.all","predict.data.new","end"),
x=c( -0, -20, -30, -40),
y=c( 0, 0, 0, 0),
M0=c( 3, 0, 0, 0)
),
arcs_df = data.frame(
begin = c("bgn","bgn","bgn",
"data.training.all","model.selected","fit.data.training.all",
"fit.data.training.all","model.final",
"data.new","predict.data.new",
"data.training.all.prediction","data.new.prediction"),
end = c("data.training.all","data.new","model.selected",
"fit.data.training.all","fit.data.training.all","model.final",
"data.training.all.prediction","predict.data.new",
"predict.data.new","data.new.prediction",
"end","end")
))
#print(ggplot.petrinet(glb_analytics_pn))
print(ggplot.petrinet(glb_analytics_pn) + coord_flip())## Loading required package: grid
glb_analytics_avl_objs <- NULL
glb_chunks_df <- myadd_chunk(NULL,
ifelse(is.null(glbChunks$first), "import.data", glbChunks$first))## label step_major step_minor label_minor bgn end elapsed
## 1 fit.models_2 1 0 0 9.814 NA NAStep 1.0: fit models_2
chunk option: eval=
Step 1.0: fit models_2
Step 1.0: fit models_2
```{r scrub.data, cache=FALSE, echo=FALSE, eval=myevlChunk(glbChunks, glbOut$pfx)}
Step 1.0: fit models_2
Step 1.0: fit models_2
Step 1.0: fit models_2
Step 1.0: fit models_2
```{r extract.features.image, cache=FALSE, echo=FALSE, fig.height=5, fig.width=5, eval=myevlChunk(glbChunks, glbOut$pfx)}
Step 1.0: fit models_2
Step 1.0: fit models_2
Step 1.0: fit models_2
Step 1.0: fit models_2
Step 1.0: fit models_2
Step 1.0: fit models_2
```{r cluster.data, cache=FALSE, echo=FALSE, eval=myevlChunk(glbChunks, glbOut$pfx)}
Step 1.0: fit models_2
Step 1.0: fit models_2
```{r select.features, cache=FALSE, echo=FALSE, eval=myevlChunk(glbChunks, glbOut$pfx)}
Step 1.0: fit models_2
fit.models_0_chunk_df <- myadd_chunk(NULL, "fit.models_0_bgn", label.minor = "setup")
# load(paste0(glbOut$pfx, "dsk.RData"))
glbgetModelSelectFormula <- function() {
model_evl_terms <- c(NULL)
# min.aic.fit might not be avl
lclMdlEvlCriteria <-
glbMdlMetricsEval[glbMdlMetricsEval %in% names(glb_models_df)]
for (metric in lclMdlEvlCriteria)
model_evl_terms <- c(model_evl_terms,
ifelse(length(grep("max", metric)) > 0, "-", "+"), metric)
if (glb_is_classification && glb_is_binomial)
model_evl_terms <- c(model_evl_terms, "-", "opt.prob.threshold.OOB")
model_sel_frmla <- as.formula(paste(c("~ ", model_evl_terms), collapse = " "))
return(model_sel_frmla)
}
glbgetDisplayModelsDf <- function() {
dsp_models_cols <- c("id",
glbMdlMetricsEval[glbMdlMetricsEval %in% names(glb_models_df)],
grep("opt.", names(glb_models_df), fixed = TRUE, value = TRUE))
dsp_models_df <-
#orderBy(glbgetModelSelectFormula(), glb_models_df)[, c("id", glbMdlMetricsEval)]
orderBy(glbgetModelSelectFormula(), glb_models_df)[, dsp_models_cols]
nCvMdl <- sapply(glb_models_lst, function(mdl) nrow(mdl$results))
nParams <- sapply(glb_models_lst, function(mdl) ifelse(mdl$method == "custom", 0,
nrow(subset(modelLookup(mdl$method), parameter != "parameter"))))
# nCvMdl <- nCvMdl[names(nCvMdl) != "avNNet"]
# nParams <- nParams[names(nParams) != "avNNet"]
if (length(cvMdlProblems <- nCvMdl[nCvMdl <= nParams]) > 0) {
print("Cross Validation issues:")
warning("Cross Validation issues:")
print(cvMdlProblems)
}
pltMdls <- setdiff(names(nCvMdl), names(cvMdlProblems))
pltMdls <- setdiff(pltMdls, names(nParams[nParams == 0]))
# length(pltMdls) == 21
png(paste0(glbOut$pfx, "bestTune.png"), width = 480 * 2, height = 480 * 4)
grid.newpage()
pushViewport(viewport(layout = grid.layout(ceiling(length(pltMdls) / 2.0), 2)))
pltIx <- 1
for (mdlId in pltMdls) {
print(ggplot(glb_models_lst[[mdlId]], highBestTune = TRUE) + labs(title = mdlId),
vp = viewport(layout.pos.row = ceiling(pltIx / 2.0),
layout.pos.col = ((pltIx - 1) %% 2) + 1))
pltIx <- pltIx + 1
}
dev.off()
if (all(row.names(dsp_models_df) != dsp_models_df$id))
row.names(dsp_models_df) <- dsp_models_df$id
return(dsp_models_df)
}
#glbgetDisplayModelsDf()
glb_get_predictions <- function(df, mdl_id, rsp_var, prob_threshold_def=NULL, verbose=FALSE) {
mdl <- glb_models_lst[[mdl_id]]
clmnNames <- mygetPredictIds(rsp_var, mdl_id)
predct_var_name <- clmnNames$value
predct_prob_var_name <- clmnNames$prob
predct_accurate_var_name <- clmnNames$is.acc
predct_error_var_name <- clmnNames$err
predct_erabs_var_name <- clmnNames$err.abs
if (glb_is_regression) {
df[, predct_var_name] <- predict(mdl, newdata=df, type="raw")
if (verbose) print(myplot_scatter(df, glb_rsp_var, predct_var_name) +
facet_wrap(reformulate(glbFeatsCategory), scales = "free") +
stat_smooth(method="glm"))
df[, predct_error_var_name] <- df[, predct_var_name] - df[, glb_rsp_var]
if (verbose) print(myplot_scatter(df, predct_var_name, predct_error_var_name) +
#facet_wrap(reformulate(glbFeatsCategory), scales = "free") +
stat_smooth(method="auto"))
if (verbose) print(myplot_scatter(df, glb_rsp_var, predct_error_var_name) +
#facet_wrap(reformulate(glbFeatsCategory), scales = "free") +
stat_smooth(method="glm"))
df[, predct_erabs_var_name] <- abs(df[, predct_error_var_name])
if (verbose) print(head(orderBy(reformulate(c("-", predct_erabs_var_name)), df)))
df[, predct_accurate_var_name] <- (df[, glb_rsp_var] == df[, predct_var_name])
}
if (glb_is_classification && glb_is_binomial) {
prob_threshold <- glb_models_df[glb_models_df$id == mdl_id,
"opt.prob.threshold.OOB"]
if (is.null(prob_threshold) || is.na(prob_threshold)) {
warning("Using default probability threshold: ", prob_threshold_def)
if (is.null(prob_threshold <- prob_threshold_def))
stop("Default probability threshold is NULL")
}
df[, predct_prob_var_name] <- predict(mdl, newdata = df, type = "prob")[, 2]
df[, predct_var_name] <-
factor(levels(df[, glb_rsp_var])[
(df[, predct_prob_var_name] >=
prob_threshold) * 1 + 1], levels(df[, glb_rsp_var]))
# if (verbose) print(myplot_scatter(df, glb_rsp_var, predct_var_name) +
# facet_wrap(reformulate(glbFeatsCategory), scales = "free") +
# stat_smooth(method="glm"))
df[, predct_error_var_name] <- df[, predct_var_name] != df[, glb_rsp_var]
# if (verbose) print(myplot_scatter(df, predct_var_name, predct_error_var_name) +
# #facet_wrap(reformulate(glbFeatsCategory), scales = "free") +
# stat_smooth(method="auto"))
# if (verbose) print(myplot_scatter(df, glb_rsp_var, predct_error_var_name) +
# #facet_wrap(reformulate(glbFeatsCategory), scales = "free") +
# stat_smooth(method="glm"))
# if prediction is a TP (true +ve), measure distance from 1.0
tp <- which((df[, predct_var_name] == df[, glb_rsp_var]) &
(df[, predct_var_name] == levels(df[, glb_rsp_var])[2]))
df[tp, predct_erabs_var_name] <- abs(1 - df[tp, predct_prob_var_name])
#rowIx <- which.max(df[tp, predct_erabs_var_name]); df[tp, c(glbFeatsId, glb_rsp_var, predct_var_name, predct_prob_var_name, predct_erabs_var_name)][rowIx, ]
# if prediction is a TN (true -ve), measure distance from 0.0
tn <- which((df[, predct_var_name] == df[, glb_rsp_var]) &
(df[, predct_var_name] == levels(df[, glb_rsp_var])[1]))
df[tn, predct_erabs_var_name] <- abs(0 - df[tn, predct_prob_var_name])
#rowIx <- which.max(df[tn, predct_erabs_var_name]); df[tn, c(glbFeatsId, glb_rsp_var, predct_var_name, predct_prob_var_name, predct_erabs_var_name)][rowIx, ]
# if prediction is a FP (flse +ve), measure distance from 0.0
fp <- which((df[, predct_var_name] != df[, glb_rsp_var]) &
(df[, predct_var_name] == levels(df[, glb_rsp_var])[2]))
df[fp, predct_erabs_var_name] <- abs(0 - df[fp, predct_prob_var_name])
#rowIx <- which.max(df[fp, predct_erabs_var_name]); df[fp, c(glbFeatsId, glb_rsp_var, predct_var_name, predct_prob_var_name, predct_erabs_var_name)][rowIx, ]
# if prediction is a FN (flse -ve), measure distance from 1.0
fn <- which((df[, predct_var_name] != df[, glb_rsp_var]) &
(df[, predct_var_name] == levels(df[, glb_rsp_var])[1]))
df[fn, predct_erabs_var_name] <- abs(1 - df[fn, predct_prob_var_name])
#rowIx <- which.max(df[fn, predct_erabs_var_name]); df[fn, c(glbFeatsId, glb_rsp_var, predct_var_name, predct_prob_var_name, predct_erabs_var_name)][rowIx, ]
if (verbose) print(head(orderBy(reformulate(c("-", predct_erabs_var_name)), df)))
df[, predct_accurate_var_name] <- (df[, glb_rsp_var] == df[, predct_var_name])
}
if (glb_is_classification && !glb_is_binomial) {
df[, predct_var_name] <- predict(mdl, newdata = df, type = "raw")
probCls <- predict(mdl, newdata = df, type = "prob")
df[, predct_prob_var_name] <- NA
for (cls in names(probCls)) {
mask <- (df[, predct_var_name] == cls)
df[mask, predct_prob_var_name] <- probCls[mask, cls]
}
if (verbose) print(myplot_histogram(df, predct_prob_var_name,
fill_col_name = predct_var_name))
if (verbose) print(myplot_histogram(df, predct_prob_var_name,
facet_frmla = paste0("~", glb_rsp_var)))
df[, predct_error_var_name] <- df[, predct_var_name] != df[, glb_rsp_var]
# if prediction is erroneous, measure predicted class prob from actual class prob
df[, predct_erabs_var_name] <- 0
for (cls in names(probCls)) {
mask <- (df[, glb_rsp_var] == cls) & (df[, predct_error_var_name])
df[mask, predct_erabs_var_name] <- probCls[mask, cls]
}
df[, predct_accurate_var_name] <- (df[, glb_rsp_var] == df[, predct_var_name])
}
return(df)
}
if (glb_is_classification && glb_is_binomial &&
(length(unique(glbObsFit[, glb_rsp_var])) < 2))
stop("glbObsFit$", glb_rsp_var, ": contains less than 2 unique values: ",
paste0(unique(glbObsFit[, glb_rsp_var]), collapse=", "))
max_cor_y_x_vars <- orderBy(~ -cor.y.abs,
subset(glb_feats_df, (exclude.as.feat == 0) & !nzv & !is.cor.y.abs.low &
is.na(cor.high.X)))[1:2, "id"]
max_cor_y_x_vars <- max_cor_y_x_vars[!is.na(max_cor_y_x_vars)]
if (length(max_cor_y_x_vars) < 2)
max_cor_y_x_vars <- union(max_cor_y_x_vars, ".pos")
if (!is.null(glb_Baseline_mdl_var)) {
if ((max_cor_y_x_vars[1] != glb_Baseline_mdl_var) &
(glb_feats_df[glb_feats_df$id == max_cor_y_x_vars[1], "cor.y.abs"] >
glb_feats_df[glb_feats_df$id == glb_Baseline_mdl_var, "cor.y.abs"]))
stop(max_cor_y_x_vars[1], " has a higher correlation with ", glb_rsp_var,
" than the Baseline var: ", glb_Baseline_mdl_var)
}
glb_model_type <- ifelse(glb_is_regression, "regression", "classification")
# Model specs
# c("id.prefix", "method", "type",
# # trainControl params
# "preProc.method", "cv.n.folds", "cv.n.repeats", "summary.fn",
# # train params
# "metric", "metric.maximize", "tune.df")
# Baseline
if (!is.null(glb_Baseline_mdl_var)) {
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Baseline"), major.inc = FALSE,
label.minor = "mybaseln_classfr")
ret_lst <- myfit_mdl(mdl_id="Baseline",
model_method="mybaseln_classfr",
indepVar=glb_Baseline_mdl_var,
rsp_var=glb_rsp_var,
fit_df=glbObsFit, OOB_df=glbObsOOB)
}
# Most Frequent Outcome "MFO" model: mean(y) for regression
# Not using caret's nullModel since model stats not avl
# Cannot use rpart for multinomial classification since it predicts non-MFO
if (glb_is_classification) {
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "MFO"), major.inc = FALSE,
label.minor = "myMFO_classfr")
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "MFO", type = glb_model_type, trainControl.method = "none",
train.method = ifelse(glb_is_regression, "lm", "myMFO_classfr"))),
indepVar = ".rnorm", rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
# "random" model - only for classification;
# none needed for regression since it is same as MFO
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Random"), major.inc = FALSE,
label.minor = "myrandom_classfr")
#stop(here"); glb2Sav(); all.equal(glb_models_df, sav_models_df)
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Random", type = glb_model_type, trainControl.method = "none",
train.method = "myrandom_classfr")),
indepVar = ".rnorm", rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
}
# Max.cor.Y
# Check impact of cv
# rpart is not a good candidate since caret does not optimize cp (only tuning parameter of rpart) well
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Max.cor.Y.rcv.*X*"), major.inc = FALSE,
label.minor = "glmnet")
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y.rcv.1X1", type = glb_model_type, trainControl.method = "none",
train.method = "glmnet")),
indepVar = max_cor_y_x_vars, rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
if (glbMdlCheckRcv) {
# rcv_n_folds == 1 & rcv_n_repeats > 1 crashes
for (rcv_n_folds in seq(3, glb_rcv_n_folds + 2, 2))
for (rcv_n_repeats in seq(1, glb_rcv_n_repeats + 2, 2)) {
# Experiment specific code to avoid caret crash
# lcl_tune_models_df <- rbind(data.frame()
# ,data.frame(method = "glmnet", parameter = "alpha",
# vals = "0.100 0.325 0.550 0.775 1.000")
# ,data.frame(method = "glmnet", parameter = "lambda",
# vals = "9.342e-02")
# )
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst =
list(
id.prefix = paste0("Max.cor.Y.rcv.", rcv_n_folds, "X", rcv_n_repeats),
type = glb_model_type,
# tune.df = lcl_tune_models_df,
trainControl.method = "repeatedcv",
trainControl.number = rcv_n_folds,
trainControl.repeats = rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
train.method = "glmnet", train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize)),
indepVar = max_cor_y_x_vars, rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
}
# Add parallel coordinates graph of glb_models_df[, glbMdlMetricsEval] to evaluate cv parameters
tmp_models_cols <- c("id", "max.nTuningRuns",
glbMdlMetricsEval[glbMdlMetricsEval %in% names(glb_models_df)],
grep("opt.", names(glb_models_df), fixed = TRUE, value = TRUE))
print(myplot_parcoord(obs_df = subset(glb_models_df,
grepl("Max.cor.Y.rcv.", id, fixed = TRUE),
select = -feats)[, tmp_models_cols],
id_var = "id"))
}
# Useful for stacking decisions
# fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
# paste0("fit.models_0_", "Max.cor.Y[rcv.1X1.cp.0|]"), major.inc = FALSE,
# label.minor = "rpart")
#
# ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
# id.prefix = "Max.cor.Y.rcv.1X1.cp.0", type = glb_model_type, trainControl.method = "none",
# train.method = "rpart",
# tune.df=data.frame(method="rpart", parameter="cp", min=0.0, max=0.0, by=0.1))),
# indepVar=max_cor_y_x_vars, rsp_var=glb_rsp_var,
# fit_df=glbObsFit, OOB_df=glbObsOOB)
#stop(here"); glb2Sav(); all.equal(glb_models_df, sav_models_df)
# if (glb_is_regression || glb_is_binomial) # For multinomials this model will be run next by default
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y",
type = glb_model_type, trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds,
trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "rpart")),
indepVar = max_cor_y_x_vars, rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
if ((length(glbFeatsDateTime) > 0) &&
(sum(grepl(paste(names(glbFeatsDateTime), "\\.day\\.minutes\\.poly\\.", sep = ""),
names(glbObsAll))) > 0)) {
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Max.cor.Y.Time.Poly"), major.inc = FALSE,
label.minor = "glmnet")
indepVars <- c(max_cor_y_x_vars,
grep(paste(names(glbFeatsDateTime), "\\.day\\.minutes\\.poly\\.", sep = ""),
names(glbObsAll), value = TRUE))
indepVars <- myadjustInteractionFeats(glb_feats_df, indepVars)
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y.Time.Poly",
type = glb_model_type, trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds, trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "glmnet")),
indepVar = indepVars,
rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
}
if ((length(glbFeatsDateTime) > 0) &&
(sum(grepl(paste(names(glbFeatsDateTime), "\\.last[[:digit:]]", sep = ""),
names(glbObsAll))) > 0)) {
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Max.cor.Y.Time.Lag"), major.inc = FALSE,
label.minor = "glmnet")
indepVars <- c(max_cor_y_x_vars,
grep(paste(names(glbFeatsDateTime), "\\.last[[:digit:]]", sep = ""),
names(glbObsAll), value = TRUE))
indepVars <- myadjustInteractionFeats(glb_feats_df, indepVars)
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y.Time.Lag",
type = glb_model_type,
tune.df = glbMdlTuneParams,
trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds, trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "glmnet")),
indepVar = indepVars,
rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
}
if (length(glbFeatsText) > 0) {
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Txt.*"), major.inc = FALSE,
label.minor = "glmnet")
indepVars <- c(max_cor_y_x_vars)
for (txtFeat in names(glbFeatsText))
indepVars <- union(indepVars,
grep(paste(str_to_upper(substr(txtFeat, 1, 1)), "\\.(?!([T|P]\\.))", sep = ""),
names(glbObsAll), perl = TRUE, value = TRUE))
indepVars <- myadjustInteractionFeats(glb_feats_df, indepVars)
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y.Text.nonTP",
type = glb_model_type,
tune.df = glbMdlTuneParams,
trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds, trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "glmnet")),
indepVar = indepVars,
rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
indepVars <- c(max_cor_y_x_vars)
for (txtFeat in names(glbFeatsText))
indepVars <- union(indepVars,
grep(paste(str_to_upper(substr(txtFeat, 1, 1)), "\\.T\\.", sep = ""),
names(glbObsAll), perl = TRUE, value = TRUE))
indepVars <- myadjustInteractionFeats(glb_feats_df, indepVars)
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y.Text.onlyT",
type = glb_model_type,
tune.df = glbMdlTuneParams,
trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds, trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "glmnet")),
indepVar = indepVars,
rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
indepVars <- c(max_cor_y_x_vars)
for (txtFeat in names(glbFeatsText))
indepVars <- union(indepVars,
grep(paste(str_to_upper(substr(txtFeat, 1, 1)), "\\.P\\.", sep = ""),
names(glbObsAll), perl = TRUE, value = TRUE))
indepVars <- myadjustInteractionFeats(glb_feats_df, indepVars)
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Max.cor.Y.Text.onlyP",
type = glb_model_type,
tune.df = glbMdlTuneParams,
trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds, trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "glmnet")),
indepVar = indepVars,
rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
}
# Interactions.High.cor.Y
if (length(int_feats <- setdiff(setdiff(unique(glb_feats_df$cor.high.X), NA),
subset(glb_feats_df, nzv)$id)) > 0) {
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Interact.High.cor.Y"), major.inc = FALSE,
label.minor = "glmnet")
ret_lst <- myfit_mdl(mdl_specs_lst=myinit_mdl_specs_lst(mdl_specs_lst=list(
id.prefix="Interact.High.cor.Y",
type=glb_model_type, trainControl.method="repeatedcv",
trainControl.number=glb_rcv_n_folds, trainControl.repeats=glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method="glmnet")),
indepVar=c(max_cor_y_x_vars, paste(max_cor_y_x_vars[1], int_feats, sep=":")),
rsp_var=glb_rsp_var,
fit_df=glbObsFit, OOB_df=glbObsOOB)
}
# Low.cor.X
fit.models_0_chunk_df <- myadd_chunk(fit.models_0_chunk_df,
paste0("fit.models_0_", "Low.cor.X"), major.inc = FALSE,
label.minor = "glmnet")
indepVar <- mygetIndepVar(glb_feats_df)
indepVar <- setdiff(indepVar, unique(glb_feats_df$cor.high.X))
ret_lst <- myfit_mdl(mdl_specs_lst = myinit_mdl_specs_lst(mdl_specs_lst = list(
id.prefix = "Low.cor.X",
type = glb_model_type,
tune.df = glbMdlTuneParams,
trainControl.method = "repeatedcv",
trainControl.number = glb_rcv_n_folds, trainControl.repeats = glb_rcv_n_repeats,
trainControl.classProbs = glb_is_classification,
trainControl.summaryFunction = glbMdlMetricSummaryFn,
trainControl.allowParallel = glbMdlAllowParallel,
train.metric = glbMdlMetricSummary,
train.maximize = glbMdlMetricMaximize,
train.method = "glmnet")),
indepVar = indepVar, rsp_var = glb_rsp_var,
fit_df = glbObsFit, OOB_df = glbObsOOB)
fit.models_0_chunk_df <-
myadd_chunk(fit.models_0_chunk_df, "fit.models_0_end", major.inc = FALSE,
label.minor = "teardown")
rm(ret_lst)
glb_chunks_df <- myadd_chunk(glb_chunks_df, "fit.models", major.inc = FALSE)```{r fit.models_1, cache=FALSE, fig.height=10, fig.width=15, eval=myevlChunk(glbChunks, glbOut$pfx)}
```{r fit.models_2, cache=FALSE, fig.height=10, fig.width=15, eval=myevlChunk(glbChunks, glbOut$pfx)}
## label step_major step_minor label_minor bgn end elapsed
## 1 fit.models_2_bgn 1 0 setup 15.75 NA NA## Loading required package: reshape2## Warning: max.AccuracyUpper.fit already exists in glb_models_df## [1] "var:max.KappaSD.fit"## Loading required package: RColorBrewer## Warning: Removed 7 rows containing missing values (geom_errorbar).## quartz_off_screen
## 2## Warning: Removed 7 rows containing missing values (geom_errorbar).
## id max.Accuracy.OOB max.AUCROCR.OOB
## 20 All.X#zv.pca#rcv#glmnet 0.6185102 0.6396502
## 19 All.X#zv.YeoJohnson.pca#rcv#glmnet 0.6049661 0.6418008
## 22 All.X#YeoJohnson#rcv#glmnet 0.6004515 0.6183995
## 11 All.X#expoTrans#rcv#glmnet 0.5981941 0.6183790
## 7 All.X##rcv#glmnet 0.5981941 0.6177236
## 18 All.X#conditionalX#rcv#glmnet 0.5981941 0.6177236
## 8 All.X#zv#rcv#glmnet 0.5981941 0.6177236
## 12 All.X#center#rcv#glmnet 0.5981941 0.6177236
## 13 All.X#scale#rcv#glmnet 0.5981941 0.6177236
## 14 All.X#center.scale#rcv#glmnet 0.5981941 0.6177236
## 10 All.X#BoxCox#rcv#glmnet 0.5981941 0.6177236
## 15 All.X#range#rcv#glmnet 0.5981941 0.6177031
## 28 All.X##rcv#gbm 0.5981941 0.6071853
## 26 All.X##rcv#nnet 0.5936795 0.6079329
## 31 All.X##rcv#earth 0.5891648 0.6300131
## 25 All.X##rcv#bayesglm 0.5891648 0.6229569
## 21 All.X##rcv#glm 0.5891648 0.6215845
## 24 All.X##rcv#bagEarth 0.5869074 0.6166482
## 9 All.X#nzv#rcv#glmnet 0.5869074 0.6160338
## 30 All.X##rcv#rf 0.5846501 0.5972512
## 29 All.X##rcv#avNNet 0.5846501 0.5963500
## 6 Low.cor.X##rcv#glmnet 0.5801354 0.6063250
## 23 RFE.X##rcv#glmnet 0.5733634 0.5998013
## 5 Interact.High.cor.Y##rcv#glmnet 0.5733634 0.5847057
## 17 All.X#spatialSign#rcv#glmnet 0.5620767 0.5909631
## 27 All.X##rcv#rpart 0.5530474 0.5700811
## 3 Max.cor.Y.rcv.1X1###glmnet 0.5485327 0.5505203
## 4 Max.cor.Y##rcv#rpart 0.5440181 0.5511143
## 16 All.X#ica#rcv#glmnet 0.5417607 0.5020483
## 2 Random###myrandom_classfr 0.5349887 0.5054791
## 1 MFO###myMFO_classfr 0.5349887 0.5000000
## max.AUCpROC.OOB min.elapsedtime.everything max.Accuracy.fit
## 20 0.6098275 37.877 0.5690120
## 19 0.5909119 92.648 0.5778312
## 22 0.5511245 20.549 0.5739975
## 11 0.5511245 41.608 0.5738059
## 7 0.5514420 8.285 0.5764853
## 18 0.5514420 9.076 0.5764853
## 8 0.5514420 9.668 0.5764853
## 12 0.5514420 9.949 0.5764853
## 13 0.5514420 9.998 0.5764853
## 14 0.5514420 11.201 0.5764853
## 10 0.5514420 12.743 0.5764853
## 15 0.5514420 10.244 0.5764853
## 28 0.5939945 40.996 0.5805007
## 26 0.5793392 51.376 0.5542802
## 31 0.5711769 32.993 0.5596389
## 25 0.5647761 18.802 0.5456648
## 21 0.5801790 10.503 0.5462408
## 24 0.5831285 1073.451 0.5401372
## 9 0.5493323 12.237 0.5762963
## 30 0.5758470 31.736 0.9994256
## 29 0.5765946 103.553 0.5628910
## 6 0.5447954 8.077 0.5764843
## 23 0.5496702 2.464 0.5828137
## 5 0.5682479 2.698 0.5540889
## 17 0.5453177 14.076 0.5734181
## 27 0.5522306 9.280 0.5466223
## 3 0.5471714 0.796 0.5588742
## 4 0.5471714 1.403 0.5588680
## 16 0.5072816 21.649 0.5387702
## 2 0.5555897 0.301 0.5364733
## 1 0.5000000 0.455 0.5364733
## opt.prob.threshold.fit opt.prob.threshold.OOB
## 20 0.50 0.45
## 19 0.50 0.45
## 22 0.50 0.45
## 11 0.50 0.45
## 7 0.50 0.45
## 18 0.50 0.45
## 8 0.50 0.45
## 12 0.50 0.45
## 13 0.50 0.45
## 14 0.50 0.45
## 10 0.50 0.45
## 15 0.50 0.45
## 28 0.50 0.50
## 26 0.45 0.30
## 31 0.45 0.55
## 25 0.50 0.45
## 21 0.50 0.45
## 24 0.50 0.50
## 9 0.45 0.45
## 30 0.50 0.55
## 29 0.50 0.55
## 6 0.45 0.45
## 23 0.50 0.45
## 5 0.50 0.50
## 17 0.45 0.50
## 27 0.50 0.55
## 3 0.50 0.55
## 4 0.50 0.50
## 16 0.50 0.50
## 2 0.55 0.55
## 1 0.50 0.50## [1] "Metrics used for model selection:"## ~-max.Accuracy.OOB - max.AUCROCR.OOB - max.AUCpROC.OOB + min.elapsedtime.everything -
## max.Accuracy.fit - opt.prob.threshold.OOB
## <environment: 0x7f84313e0590>## [1] "Best model id: All.X#zv.pca#rcv#glmnet"## label step_major step_minor label_minor bgn end
## 1 fit.models_2_bgn 1 0 setup 15.750 18.766
## 2 fit.models_2_Ensemble 2 0 ensemble 18.766 NA
## elapsed
## 1 3.016
## 2 NA
## [1] "cor(Party.fctr.All.X..rcv.glmnet.prob, Party.fctr.All.X.BoxCox.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.BoxCox.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X..rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.BoxCox.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.BoxCox.rcv.glmnet.prob, Party.fctr.All.X.center.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.BoxCox.rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.center.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.center.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.BoxCox.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.BoxCox.rcv.glmnet.prob, Party.fctr.All.X.center.scale.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.BoxCox.rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.center.scale.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.center.scale.rcv.glmnet.prob as
## highly correlated with Party.fctr.All.X.BoxCox.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.BoxCox.rcv.glmnet.prob, Party.fctr.All.X.conditionalX.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.BoxCox.rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.conditionalX.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.conditionalX.rcv.glmnet.prob as
## highly correlated with Party.fctr.All.X.BoxCox.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.BoxCox.rcv.glmnet.prob, Party.fctr.All.X.range.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.BoxCox.rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.range.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.BoxCox.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.range.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.range.rcv.glmnet.prob, Party.fctr.All.X.scale.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.range.rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.scale.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.scale.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.range.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.range.rcv.glmnet.prob, Party.fctr.All.X.zv.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.range.rcv.glmnet.prob)=0.2749"
## [1] "cor(Party.fctr, Party.fctr.All.X.zv.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.zv.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.range.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob)=0.2751"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob as
## highly correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.expoTrans.rcv.glmnet.prob, Party.fctr.All.X.range.rcv.glmnet.prob)=1.0000"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"
## [1] "cor(Party.fctr, Party.fctr.All.X.range.rcv.glmnet.prob)=0.2749"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.range.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X..rcv.bayesglm.prob, Party.fctr.All.X..rcv.glm.prob)=0.9989"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.bayesglm.prob)=0.4042"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.glm.prob)=0.4042"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X..rcv.glm.prob as highly
## correlated with Party.fctr.All.X..rcv.bayesglm.prob## [1] "cor(Party.fctr.All.X.expoTrans.rcv.glmnet.prob, Party.fctr.Low.cor.X..rcv.glmnet.prob)=0.9946"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"
## [1] "cor(Party.fctr, Party.fctr.Low.cor.X..rcv.glmnet.prob)=0.2677"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.Low.cor.X..rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X.expoTrans.rcv.glmnet.prob, Party.fctr.All.X.nzv.rcv.glmnet.prob)=0.9924"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"
## [1] "cor(Party.fctr, Party.fctr.All.X.nzv.rcv.glmnet.prob)=0.2693"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.nzv.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.Max.cor.Y..rcv.rpart.prob, Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob)=0.9649"
## [1] "cor(Party.fctr, Party.fctr.Max.cor.Y..rcv.rpart.prob)=0.1314"
## [1] "cor(Party.fctr, Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob)=0.1327"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.Max.cor.Y..rcv.rpart.prob as highly
## correlated with Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob## [1] "cor(Party.fctr.All.X.expoTrans.rcv.glmnet.prob, Party.fctr.All.X.spatialSign.rcv.glmnet.prob)=0.9272"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"
## [1] "cor(Party.fctr, Party.fctr.All.X.spatialSign.rcv.glmnet.prob)=0.2419"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.spatialSign.rcv.glmnet.prob as
## highly correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X..rcv.bagEarth.prob, Party.fctr.All.X..rcv.bayesglm.prob)=0.9140"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.bagEarth.prob)=0.4049"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.bayesglm.prob)=0.4042"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X..rcv.bayesglm.prob as highly
## correlated with Party.fctr.All.X..rcv.bagEarth.prob## [1] "cor(Party.fctr.All.X..rcv.bagEarth.prob, Party.fctr.All.X.zv.pca.rcv.glmnet.prob)=0.8912"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.bagEarth.prob)=0.4049"
## [1] "cor(Party.fctr, Party.fctr.All.X.zv.pca.rcv.glmnet.prob)=0.3680"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.zv.pca.rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X..rcv.bagEarth.prob## [1] "cor(Party.fctr.All.X..rcv.earth.prob, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.8834"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.earth.prob)=0.2658"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X..rcv.earth.prob as highly
## correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.All.X..rcv.bagEarth.prob, Party.fctr.All.X..rcv.gbm.prob)=0.8390"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.bagEarth.prob)=0.4049"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.gbm.prob)=0.4835"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X..rcv.bagEarth.prob as highly
## correlated with Party.fctr.All.X..rcv.gbm.prob## [1] "cor(Party.fctr.All.X..rcv.avNNet.prob, Party.fctr.All.X..rcv.rf.prob)=0.8210"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.avNNet.prob)=0.7115"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.rf.prob)=0.8848"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X..rcv.avNNet.prob as highly
## correlated with Party.fctr.All.X..rcv.rf.prob## [1] "cor(Party.fctr.All.X.expoTrans.rcv.glmnet.prob, Party.fctr.RFE.X..rcv.glmnet.prob)=0.8180"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"
## [1] "cor(Party.fctr, Party.fctr.RFE.X..rcv.glmnet.prob)=0.2246"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.RFE.X..rcv.glmnet.prob as highly
## correlated with Party.fctr.All.X.expoTrans.rcv.glmnet.prob## [1] "cor(Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob, Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob)=0.7560"
## [1] "cor(Party.fctr, Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob)=0.1846"
## [1] "cor(Party.fctr, Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob)=0.1327"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob as
## highly correlated with Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob## [1] "cor(Party.fctr.All.X..rcv.gbm.prob, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.7449"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.gbm.prob)=0.4835"
## [1] "cor(Party.fctr, Party.fctr.All.X.expoTrans.rcv.glmnet.prob)=0.2751"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.expoTrans.rcv.glmnet.prob as
## highly correlated with Party.fctr.All.X..rcv.gbm.prob## [1] "cor(Party.fctr.All.X..rcv.gbm.prob, Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob)=0.7028"
## [1] "cor(Party.fctr, Party.fctr.All.X..rcv.gbm.prob)=0.4835"
## [1] "cor(Party.fctr, Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob)=0.3124"## Warning in myfind_cor_features(feats_df = mdlEnsembleDf, obs_df =
## glbObsTrn[, : Identified Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## as highly correlated with Party.fctr.All.X..rcv.gbm.prob## [1] "myfit_mdl: enter: 0.001000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.1##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm"
## [1] "myfit_mdl: setup complete: 0.656000 secs"## Loading required package: glmnet## Loading required package: Matrix## Loaded glmnet 2.0-5## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.00401 on full training set
## [1] "myfit_mdl: train complete: 2.797000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Length Class Mode
## a0 70 -none- numeric
## beta 140 dgCMatrix S4
## df 70 -none- numeric
## dim 2 -none- numeric
## lambda 70 -none- numeric
## dev.ratio 70 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 2 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.956562460
## .rnorm
## 0.003680609
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 6.014131897
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.963560909
## .rnorm
## 0.003766947
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 6.029024864
## [1] "myfit_mdl: train diagnostics complete: 3.292000 secs"## Loading required namespace: pROC## Loading required package: ROCR## Loading required package: gplots##
## Attaching package: 'gplots'## The following object is masked from 'package:stats':
##
## lowess
## Loading required package: sqldf## Loading required package: gsubfn## Loading required package: proto## Loading required package: RSQLite## Loading required package: DBI## Loading required package: tcltk
## Prediction
## Reference D R
## D 809 125
## R 468 339
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 6.593912e-01 2.947589e-01 6.365885e-01 6.816553e-01 5.364733e-01
## AccuracyPValue McnemarPValue
## 1.573605e-25 8.354027e-45
## Prediction
## Reference D R
## D 147 90
## R 84 122
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.607223476 0.212082183 0.560024928 0.652980193 0.534988713
## AccuracyPValue McnemarPValue
## 0.001288291 0.704651461
## [1] "myfit_mdl: predict complete: 13.029000 secs"
## id
## 1 Ensemble.auto.1##rcv#glmnet
## feats max.nTuningRuns
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm 20
## min.elapsedtime.everything min.elapsedtime.final max.AUCpROC.fit
## 1 2.134 0.022 0.6529723
## max.Sens.fit max.Spec.fit max.AUCROCR.fit opt.prob.threshold.fit
## 1 0.7173448 0.5885998 0.7308853 0.6
## max.f.score.fit max.Accuracy.fit max.AccuracyLower.fit
## 1 0.5334382 0.6599656 0.6365885
## max.AccuracyUpper.fit max.Kappa.fit max.AUCpROC.OOB max.Sens.OOB
## 1 0.6816553 0.3124477 0.6062431 0.6202532
## max.Spec.OOB max.AUCROCR.OOB opt.prob.threshold.OOB max.f.score.OOB
## 1 0.592233 0.6397935 0.5 0.5837321
## max.Accuracy.OOB max.AccuracyLower.OOB max.AccuracyUpper.OOB
## 1 0.6072235 0.5600249 0.6529802
## max.Kappa.OOB max.AccuracySD.fit max.KappaSD.fit
## 1 0.2120822 0.01856419 0.0371223
## [1] "myfit_mdl: exit: 13.110000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 100
## .rnorm 0
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4443496
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6716506
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6342442
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.89118
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8828277
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8723863
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8523558
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.5907518
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.00000000
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.89118004
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.88282772
## Party.fctr.All.X..rcv.glm.prob
## 0.87238630
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.85235576
## Party.fctr.All.X..rcv.gbm.prob
## 0.80828671
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.72541681
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X..rcv.glmnet.prob
## 0.72541583
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.72536860
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.71532332
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.71236524
## Party.fctr.All.X..rcv.avNNet.prob
## 0.67165059
## Party.fctr.All.X..rcv.earth.prob
## 0.67006506
## Party.fctr.All.X..rcv.nnet.prob
## 0.63424421
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.63088912
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.59075182
## Party.fctr.All.X..rcv.rpart.prob
## 0.46496974
## Party.fctr.All.X..rcv.rf.prob
## 0.44434961
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.39360723
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.37086950
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.35388921
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.06921113
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.2##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.697000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.00401 on full training set
## [1] "myfit_mdl: train complete: 2.620000 secs"
## Length Class Mode
## a0 53 -none- numeric
## beta 159 dgCMatrix S4
## df 53 -none- numeric
## dim 2 -none- numeric
## lambda 53 -none- numeric
## dev.ratio 53 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 3 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -3.482715
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 1.140275
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 6.007640
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -3.516498
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 1.198098
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 6.022408
## [1] "myfit_mdl: train diagnostics complete: 3.213000 secs"
## Prediction
## Reference D R
## D 672 262
## R 330 477
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 6.599655e-01 3.123536e-01 6.371710e-01 6.822196e-01 5.364733e-01
## AccuracyPValue McnemarPValue
## 9.364589e-26 5.892881e-03
## Prediction
## Reference D R
## D 148 89
## R 85 121
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.607223476 0.211582522 0.560024928 0.652980193 0.534988713
## AccuracyPValue McnemarPValue
## 0.001288291 0.820089851
## [1] "myfit_mdl: predict complete: 10.924000 secs"
## id
## 1 Ensemble.auto.2##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 20 1.919 0.017
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.6552821 0.7194861 0.5910781 0.730929
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.6170763 0.6618823
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.637171 0.6822196 0.3162352
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.6059256 0.6244726 0.5873786 0.6395682
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.5 0.5817308 0.6072235
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5600249 0.6529802 0.2115825
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.01960762 0.03947396
## [1] "myfit_mdl: exit: 10.999000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 100.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 19.43
## .rnorm 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5346056
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.5346056
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5000821
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4894128
## Party.fctr.All.X..rcv.glm.prob
## 0.4834978
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X..rcv.glmnet.prob
## 0.4746331
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.4745678
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.4745559
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.4658043
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.4654140
## Party.fctr.All.X..rcv.gbm.prob
## 0.4559890
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.4271674
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4213943
## Party.fctr.All.X..rcv.earth.prob
## 0.4060798
## Party.fctr.All.X..rcv.avNNet.prob
## 0.3654168
## Party.fctr.All.X..rcv.nnet.prob
## 0.3415870
## Party.fctr.All.X..rcv.rpart.prob
## 0.3302855
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.3139368
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.2817379
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.2705855
## Party.fctr.All.X..rcv.rf.prob
## 0.2501449
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.2394644
## [1] "myfit_mdl: enter: 0.001000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.3##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.698000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.775, lambda = 0.00401 on full training set
## [1] "myfit_mdl: train complete: 2.701000 secs"
## Length Class Mode
## a0 50 -none- numeric
## beta 200 dgCMatrix S4
## df 50 -none- numeric
## dim 2 -none- numeric
## lambda 50 -none- numeric
## dev.ratio 50 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 4 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -3.3340538
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.8260004
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 6.0017708
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -3.3809618
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.9115226
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 6.0171056
## [1] "myfit_mdl: train diagnostics complete: 3.291000 secs"
## Prediction
## Reference D R
## D 672 262
## R 329 478
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 6.605399e-01 3.135733e-01 6.377535e-01 6.827839e-01 5.364733e-01
## AccuracyPValue McnemarPValue
## 5.558782e-26 6.630034e-03
## Prediction
## Reference D R
## D 148 89
## R 85 121
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.607223476 0.211582522 0.560024928 0.652980193 0.534988713
## AccuracyPValue McnemarPValue
## 0.001288291 0.820089851
## [1] "myfit_mdl: predict complete: 10.877000 secs"
## id
## 1 Ensemble.auto.3##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 20 1.997 0.017
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.6559017 0.7194861 0.5923172 0.7309423
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.6179703 0.6613076
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.6377535 0.6827839 0.3150177
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.6059256 0.6244726 0.5873786 0.6395887
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.5 0.5817308 0.6072235
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5600249 0.6529802 0.2115825
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.01884745 0.03784478
## [1] "myfit_mdl: exit: 10.958000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 100.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 14.87
## .rnorm 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.5094508
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4929763
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X..rcv.glmnet.prob
## 0.4907071
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.4906552
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.4906539
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.4869630
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.4853610
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.4800269
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.4750609
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.4651548
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4323976
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4319807
## Party.fctr.All.X..rcv.earth.prob
## 0.4298537
## Party.fctr.All.X..rcv.gbm.prob
## 0.4281127
## Party.fctr.All.X..rcv.glm.prob
## 0.4258405
## Party.fctr.All.X..rcv.rpart.prob
## 0.4225604
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4077653
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.3924235
## Party.fctr.All.X..rcv.avNNet.prob
## 0.3413032
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.3162222
## Party.fctr.All.X..rcv.nnet.prob
## 0.3037333
## Party.fctr.All.X..rcv.rf.prob
## 0.2290687
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.4##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob"
## [1] "myfit_mdl: setup complete: 0.680000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.973000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 500 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 5 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.248000
## Party.fctr.All.X..rcv.rf.prob
## 3.277938
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.157682
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.349206
## Party.fctr.All.X..rcv.rf.prob
## 3.457519
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.188663
## [1] "myfit_mdl: train diagnostics complete: 3.593000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## 12 0.55 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 161 76
## R 97 109
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.609480813 0.209850195 0.562313458 0.655175934 0.534988713
## AccuracyPValue McnemarPValue
## 0.000933503 0.128367317
## [1] "myfit_mdl: predict complete: 11.337000 secs"
## id
## 1 Ensemble.auto.4##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.287 0.039
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999987
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.6042256 0.6793249 0.5291262 0.6235304
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.5 0.5575448 0.6094808
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5623135 0.6551759 0.2098502
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.414000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 34.55
## .rnorm 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.All.X..rcv.rf.prob 0.05594012
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.4740353
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.4711076
## Party.fctr.All.X..rcv.gbm.prob
## 0.4690072
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4612352
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X..rcv.glmnet.prob
## 0.4585915
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.4585441
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.4585378
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.4541170
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.4532682
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4450490
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.4404079
## Party.fctr.All.X..rcv.glm.prob
## 0.4402334
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4279759
## Party.fctr.All.X..rcv.rf.prob
## 0.4218015
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4164613
## Party.fctr.All.X..rcv.earth.prob
## 0.4051983
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.3999253
## Party.fctr.All.X..rcv.rpart.prob
## 0.3841697
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.3798135
## Party.fctr.All.X..rcv.nnet.prob
## 0.3735188
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.3133796
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.3083026
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.5##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.703000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.788000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 600 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 6 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.3231739
## Party.fctr.All.X..rcv.rf.prob
## 3.2737318
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.1226230
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.2012458
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.4217710
## Party.fctr.All.X..rcv.rf.prob
## 3.4535165
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.1534973
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.1955345
## [1] "myfit_mdl: train diagnostics complete: 3.406000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## 12 0.55 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 158 79
## R 98 108
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.600451467 0.192097264 0.553165390 0.646386898 0.534988713
## AccuracyPValue McnemarPValue
## 0.003212337 0.176067499
## [1] "myfit_mdl: predict complete: 11.154000 secs"
## id
## 1 Ensemble.auto.5##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.078 0.041
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999973
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5954693 0.6666667 0.5242718 0.6245955
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.5 0.5496183 0.6004515
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5531654 0.6463869 0.1920973
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.232000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.000
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 33.565
## Party.fctr.RFE.X..rcv.glmnet.prob 5.752
## .rnorm 0.000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.000
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.All.X..rcv.rf.prob 0.05594012
## Party.fctr.RFE.X..rcv.glmnet.prob 0.03712174
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5304793
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5304438
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5304171
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5281176
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5268089
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5043843
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5041989
## Party.fctr.All.X..rcv.gbm.prob
## 0.5003496
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.4950364
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4663614
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4644408
## Party.fctr.All.X..rcv.glm.prob
## 0.4586514
## Party.fctr.All.X..rcv.earth.prob
## 0.4552947
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4507037
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4425767
## Party.fctr.All.X..rcv.rpart.prob
## 0.4114799
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4040330
## Party.fctr.All.X..rcv.rf.prob
## 0.3984116
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.3973277
## Party.fctr.All.X..rcv.nnet.prob
## 0.3830947
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.3583997
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.2540664
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.6##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.688000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.855000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 700 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 7 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.4147362
## Party.fctr.All.X..rcv.rf.prob
## 3.2704739
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.1033155
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.2340248
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.1865434
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.5179878
## Party.fctr.All.X..rcv.rf.prob
## 3.4500978
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1.1325554
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.2468211
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.1797940
## [1] "myfit_mdl: train diagnostics complete: 3.479000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## 12 0.55 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 190 47
## R 129 77
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 6.027088e-01 1.801645e-01 5.554509e-01 6.485857e-01 5.349887e-01
## AccuracyPValue McnemarPValue
## 2.389716e-03 1.024122e-09
## [1] "myfit_mdl: predict complete: 11.215000 secs"
## id
## 1 Ensemble.auto.6##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.16 0.046
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999973
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5902974 0.6708861 0.5097087 0.6253328
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.55 0.4666667 0.6027088
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5554509 0.6485857 0.1801645
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.294000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.000
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 32.995
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 7.154
## Party.fctr.RFE.X..rcv.glmnet.prob 5.302
## .rnorm 0.000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.000
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.All.X..rcv.rf.prob 0.05594012
## Party.fctr.RFE.X..rcv.glmnet.prob 0.03712174
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.14756379
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5212750
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5212314
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5212158
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5200267
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5117778
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.4984456
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.4911650
## Party.fctr.All.X..rcv.gbm.prob
## 0.4789839
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.4781315
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4653331
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4581509
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4571100
## Party.fctr.All.X..rcv.earth.prob
## 0.4539385
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4458563
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4406588
## Party.fctr.All.X..rcv.glm.prob
## 0.4398862
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4324480
## Party.fctr.All.X..rcv.rpart.prob
## 0.4239608
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4210438
## Party.fctr.All.X..rcv.rf.prob
## 0.3690199
## Party.fctr.All.X..rcv.nnet.prob
## 0.3629940
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.2363160
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.7##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob"
## [1] "myfit_mdl: setup complete: 0.687000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.897000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 800 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 8 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.42844592
## Party.fctr.All.X..rcv.nnet.prob
## 1.04444990
## Party.fctr.All.X..rcv.rf.prob
## 3.07568947
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.66313975
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.02318591
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.52737770
## Party.fctr.All.X..rcv.nnet.prob
## 1.07296423
## Party.fctr.All.X..rcv.rf.prob
## 3.24631206
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.66409214
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.02786074
## [1] "myfit_mdl: train diagnostics complete: 3.496000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 171 66
## R 109 97
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.604966140 0.195055601 0.557737408 0.650783438 0.534988713
## AccuracyPValue McnemarPValue
## 0.001762317 0.001498873
## [1] "myfit_mdl: predict complete: 11.073000 secs"
## id
## 1 Ensemble.auto.7##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.203 0.048
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 1
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5955819 0.6329114 0.5582524 0.6229978
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.55 0.5257453 0.6049661
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5577374 0.6507834 0.1950556
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.152000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.0000
## Party.fctr.All.X..rcv.nnet.prob 33.2193
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 20.6608
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.8389
## .rnorm 0.0000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.0000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.0000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.0000
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.All.X..rcv.rf.prob 0.05594012
## Party.fctr.RFE.X..rcv.glmnet.prob 0.03712174
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.14756379
## Party.fctr.All.X..rcv.nnet.prob 0.04892984
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5182651
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5182479
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5182459
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5157231
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5143410
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5089375
## Party.fctr.All.X..rcv.gbm.prob
## 0.5037266
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5004334
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.4911560
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4817976
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4789703
## Party.fctr.All.X..rcv.glm.prob
## 0.4763368
## Party.fctr.All.X..rcv.nnet.prob
## 0.4539949
## Party.fctr.All.X..rcv.earth.prob
## 0.4534448
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4490747
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4363555
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4243837
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4242994
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4210945
## Party.fctr.All.X..rcv.rpart.prob
## 0.4121168
## Party.fctr.All.X..rcv.rf.prob
## 0.3995707
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.2095466
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.8##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob"
## [1] "myfit_mdl: setup complete: 0.674000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.860000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 900 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 9 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.43257913
## Party.fctr.All.X..rcv.nnet.prob
## 1.04408613
## Party.fctr.All.X..rcv.rf.prob
## 3.07552883
## Party.fctr.All.X..rcv.rpart.prob
## 0.01388748
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.66171681
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.02010406
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.530051398
## Party.fctr.All.X..rcv.nnet.prob
## 1.072728008
## Party.fctr.All.X..rcv.rf.prob
## 3.246212451
## Party.fctr.All.X..rcv.rpart.prob
## 0.009106864
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.663126140
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.025783892
## [1] "myfit_mdl: train diagnostics complete: 3.475000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 170 67
## R 109 97
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.602708804 0.190716406 0.555450897 0.648585672 0.534988713
## AccuracyPValue McnemarPValue
## 0.002389716 0.001998257
## [1] "myfit_mdl: predict complete: 11.505000 secs"
## id
## 1 Ensemble.auto.8##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.178 0.05
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 1
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5955819 0.6329114 0.5582524 0.6229773
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.55 0.5243243 0.6027088
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5554509 0.6485857 0.1907164
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.586000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.0000
## Party.fctr.All.X..rcv.nnet.prob 33.2124
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 20.6288
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7683
## Party.fctr.All.X..rcv.rpart.prob 0.3121
## .rnorm 0.0000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.0000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.0000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.0000
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.All.X..rcv.rf.prob 0.05594012
## Party.fctr.RFE.X..rcv.glmnet.prob 0.03712174
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.14756379
## Party.fctr.All.X..rcv.nnet.prob 0.04892984
## Party.fctr.All.X..rcv.rpart.prob 0.19560129
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5387708
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5387700
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5387568
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5371265
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5306966
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5131595
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5127080
## Party.fctr.All.X..rcv.gbm.prob
## 0.5038432
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.4960004
## Party.fctr.All.X..rcv.rpart.prob
## 0.4856022
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4741942
## Party.fctr.All.X..rcv.earth.prob
## 0.4732832
## Party.fctr.All.X..rcv.glm.prob
## 0.4685609
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4674072
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4527387
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4478403
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4472245
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4426068
## Party.fctr.All.X..rcv.nnet.prob
## 0.4398771
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4335478
## Party.fctr.All.X..rcv.rf.prob
## 0.3832490
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.2078034
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.9##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob"
## [1] "myfit_mdl: setup complete: 0.680000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.901000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 10 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -2.43257913
## Party.fctr.All.X..rcv.nnet.prob
## 1.04408613
## Party.fctr.All.X..rcv.rf.prob
## 3.07552883
## Party.fctr.All.X..rcv.rpart.prob
## 0.01388748
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.66171681
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.02010406
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -2.530051398
## Party.fctr.All.X..rcv.nnet.prob
## 1.072728008
## Party.fctr.All.X..rcv.rf.prob
## 3.246212451
## Party.fctr.All.X..rcv.rpart.prob
## 0.009106864
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.663126140
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.025783892
## [1] "myfit_mdl: train diagnostics complete: 3.515000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 170 67
## R 109 97
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.602708804 0.190716406 0.555450897 0.648585672 0.534988713
## AccuracyPValue McnemarPValue
## 0.002389716 0.001998257
## [1] "myfit_mdl: predict complete: 11.148000 secs"
## id
## 1 Ensemble.auto.9##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.214 0.053
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 1
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5955819 0.6329114 0.5582524 0.6229773
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.55 0.5243243 0.6027088
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5554509 0.6485857 0.1907164
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.229000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.0000
## Party.fctr.All.X..rcv.nnet.prob 33.2124
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 20.6288
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7683
## Party.fctr.All.X..rcv.rpart.prob 0.3121
## .rnorm 0.0000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.0000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.0000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.0000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.0000
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.06921113
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.00000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.10805925
## Party.fctr.All.X..rcv.rf.prob 0.05594012
## Party.fctr.RFE.X..rcv.glmnet.prob 0.03712174
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.14756379
## Party.fctr.All.X..rcv.nnet.prob 0.04892984
## Party.fctr.All.X..rcv.rpart.prob 0.19560129
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.20958662
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5369822
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5369816
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5369711
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5362509
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5300630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5201677
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.5091914
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.5047414
## Party.fctr.All.X..rcv.rpart.prob
## 0.4997160
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.4990007
## Party.fctr.All.X..rcv.gbm.prob
## 0.4879013
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.4802103
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4743994
## Party.fctr.All.X..rcv.earth.prob
## 0.4727318
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4557774
## Party.fctr.All.X..rcv.glm.prob
## 0.4500900
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4467640
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4416299
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4196270
## Party.fctr.All.X..rcv.nnet.prob
## 0.4155786
## Party.fctr.All.X..rcv.rf.prob
## 0.3610604
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.2080015
## [1] "myfit_mdl: enter: 0.001000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.10##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.694000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.325, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.953000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1100 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 11 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.nnet.prob
## -2.1049755 0.7756052
## Party.fctr.All.X..rcv.rf.prob
## 3.3386591
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.nnet.prob
## -2.218281 0.813180
## Party.fctr.All.X..rcv.rf.prob
## 3.535691
## [1] "myfit_mdl: train diagnostics complete: 3.551000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.9993808 0.9994256
## 10 0.45 0.9993800 0.9994256
## 11 0.50 0.9993800 0.9994256
## 12 0.55 0.9993800 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 10 0.45 0.6004515 0.6004515
## 11 0.50 0.5518987 0.6004515
## Prediction
## Reference D R
## D 157 80
## R 97 109
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.600451467 0.192613034 0.553165390 0.646386898 0.534988713
## AccuracyPValue McnemarPValue
## 0.003212337 0.229118122
## [1] "myfit_mdl: predict complete: 11.097000 secs"
## id
## 1 Ensemble.auto.10##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.251 0.043
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 1
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5957867 0.6624473 0.5291262 0.6129306
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.5 0.5518987 0.6004515
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5531654 0.6463869 0.192613
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.183000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.0
## Party.fctr.All.X..rcv.nnet.prob 23.2
## .rnorm 0.0
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.0
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.0
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.0
## Party.fctr.All.X..rcv.rpart.prob 0.0
## Party.fctr.RFE.X..rcv.glmnet.prob 0.0
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.0
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.0
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.0
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5516021
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5515931
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5515828
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5497798
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5445016
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5262862
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5249013
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5174248
## Party.fctr.All.X..rcv.gbm.prob
## 0.5093946
## Party.fctr.All.X..rcv.rpart.prob
## 0.4975831
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.4974669
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4935482
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4923180
## Party.fctr.All.X..rcv.earth.prob
## 0.4863104
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.4838442
## Party.fctr.All.X..rcv.glm.prob
## 0.4777582
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4651399
## Party.fctr.All.X..rcv.avNNet.prob
## 0.4603534
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4389826
## Party.fctr.All.X..rcv.nnet.prob
## 0.4289042
## Party.fctr.All.X..rcv.rf.prob
## 0.3625949
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1862447
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.11##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob"
## [1] "myfit_mdl: setup complete: 0.692000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.987000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1200 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 12 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.600000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.216000 secs"
## id
## 1 Ensemble.auto.11##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.286 0.05
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.299000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5522890
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5522576
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5522462
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5500289
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5454348
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5422725
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5314453
## Party.fctr.All.X..rcv.gbm.prob
## 0.5287503
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5250097
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5094122
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5052116
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.5050030
## Party.fctr.All.X..rcv.glm.prob
## 0.4990750
## Party.fctr.All.X..rcv.earth.prob
## 0.4883868
## Party.fctr.All.X..rcv.rpart.prob
## 0.4874815
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4742818
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4742051
## Party.fctr.All.X..rcv.nnet.prob
## 0.4543528
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4512314
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4433356
## Party.fctr.All.X..rcv.rf.prob
## 0.4042709
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1746936
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.12##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob"
## [1] "myfit_mdl: setup complete: 0.676000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.035000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1300 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 13 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.645000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.342000 secs"
## id
## 1 Ensemble.auto.12##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.35 0.051
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.425000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5798771
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5798527
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5798460
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5772662
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5723975
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5590987
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5491603
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5429970
## Party.fctr.All.X..rcv.gbm.prob
## 0.5414602
## Party.fctr.All.X..rcv.earth.prob
## 0.5310212
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.5160950
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5138204
## Party.fctr.All.X..rcv.glm.prob
## 0.5099449
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5093904
## Party.fctr.All.X..rcv.rpart.prob
## 0.4978707
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4744715
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4737851
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4610310
## Party.fctr.All.X..rcv.nnet.prob
## 0.4540303
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4508919
## Party.fctr.All.X..rcv.rf.prob
## 0.3981844
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1719770
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.13##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob"
## [1] "myfit_mdl: setup complete: 0.680000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.977000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1400 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 14 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.594000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.282000 secs"
## id
## 1 Ensemble.auto.13##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.287 0.051
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.374000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X..rcv.glmnet.prob
## 0.5862862
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.5862687
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.5862615
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5857931
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.5826602
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.5785046
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5683346
## Party.fctr.All.X..rcv.gbm.prob
## 0.5600635
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.5532338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5511537
## Party.fctr.All.X..rcv.glm.prob
## 0.5476414
## Party.fctr.All.X..rcv.earth.prob
## 0.5385975
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5302013
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5249945
## Party.fctr.All.X..rcv.rpart.prob
## 0.4914291
## Party.fctr.All.X..rcv.nnet.prob
## 0.4725696
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4665150
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4618603
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4605957
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4428279
## Party.fctr.All.X..rcv.rf.prob
## 0.4047404
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1660256
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.14##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.682000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.061000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1500 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 15 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.676000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.442000 secs"
## id
## 1 Ensemble.auto.14##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.369 0.053
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.528000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6106307
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6106181
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6106134
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6076094
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6037676
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.5932031
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5832141
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5728028
## Party.fctr.All.X..rcv.gbm.prob
## 0.5667446
## Party.fctr.All.X..rcv.earth.prob
## 0.5583275
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.5554430
## Party.fctr.All.X..rcv.glm.prob
## 0.5496009
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5338550
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5240838
## Party.fctr.All.X..rcv.rpart.prob
## 0.5037250
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4874989
## Party.fctr.All.X..rcv.nnet.prob
## 0.4707731
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4696451
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4691135
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4446796
## Party.fctr.All.X..rcv.rf.prob
## 0.3998624
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1701271
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.15##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob"
## [1] "myfit_mdl: setup complete: 0.679000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.078000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1600 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 16 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.704000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.451000 secs"
## id
## 1 Ensemble.auto.15##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.389 0.053
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.539000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6148139
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6148061
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6148008
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6145918
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6109582
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6076482
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.5934711
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.5850801
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5832774
## Party.fctr.All.X..rcv.gbm.prob
## 0.5817846
## Party.fctr.All.X..rcv.glm.prob
## 0.5795541
## Party.fctr.All.X..rcv.earth.prob
## 0.5636462
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5473609
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5369176
## Party.fctr.All.X..rcv.rpart.prob
## 0.4982080
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4911329
## Party.fctr.All.X..rcv.nnet.prob
## 0.4858846
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4594765
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4584022
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4385632
## Party.fctr.All.X..rcv.rf.prob
## 0.4054885
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1651851
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.16##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob"
## [1] "myfit_mdl: setup complete: 0.683000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.135000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1700 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 17 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.734000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.526000 secs"
## id
## 1 Ensemble.auto.16##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.441 0.054
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.615000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6286144
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6229391
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6229370
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6229264
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6184415
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6156542
## Party.fctr.All.X..rcv.gbm.prob
## 0.6079230
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6068971
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.5980341
## Party.fctr.All.X..rcv.glm.prob
## 0.5922884
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.5876725
## Party.fctr.All.X..rcv.earth.prob
## 0.5709976
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5570780
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5485045
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.4995445
## Party.fctr.All.X..rcv.rpart.prob
## 0.4986112
## Party.fctr.All.X..rcv.nnet.prob
## 0.4962782
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4540317
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4522749
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4344127
## Party.fctr.All.X..rcv.rf.prob
## 0.4171261
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1613418
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.17##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.683000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.175000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1800 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 18 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.789000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.599000 secs"
## id
## 1 Ensemble.auto.17##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.481 0.056
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.689000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6448044
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6447998
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6447897
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6400920
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6382627
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6367576
## Party.fctr.All.X..rcv.gbm.prob
## 0.6154419
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6132751
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6079380
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6017954
## Party.fctr.All.X..rcv.glm.prob
## 0.5957885
## Party.fctr.All.X..rcv.earth.prob
## 0.5885264
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5639821
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5488729
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5184520
## Party.fctr.All.X..rcv.rpart.prob
## 0.5094582
## Party.fctr.All.X..rcv.nnet.prob
## 0.4960204
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4582214
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4565525
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4345427
## Party.fctr.All.X..rcv.rf.prob
## 0.4135887
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1645278
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.18##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob"
## [1] "myfit_mdl: setup complete: 0.682000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.516000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 1900 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 19 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.124000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.939000 secs"
## id
## 1 Ensemble.auto.18##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.823 0.055
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.030000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6569377
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6523981
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6523908
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6523792
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6471709
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6454175
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6287143
## Party.fctr.All.X..rcv.gbm.prob
## 0.6278592
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6191420
## Party.fctr.All.X..rcv.glm.prob
## 0.6130294
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6124711
## Party.fctr.All.X..rcv.earth.prob
## 0.5971743
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5747613
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5581569
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5243632
## Party.fctr.All.X..rcv.rpart.prob
## 0.5092044
## Party.fctr.All.X..rcv.nnet.prob
## 0.5047636
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4547257
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4526179
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4340679
## Party.fctr.All.X..rcv.rf.prob
## 0.4184269
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1614420
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.19##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.676000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.184000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 20 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.793000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.567000 secs"
## id
## 1 Ensemble.auto.19##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.497 0.055
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.659000 secs"
## glmnet variable importance
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6702902
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6702836
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6702722
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6657408
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6633692
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6627574
## Party.fctr.All.X..rcv.gbm.prob
## 0.6332714
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6331170
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6292857
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6211789
## Party.fctr.All.X..rcv.glm.prob
## 0.6148378
## Party.fctr.All.X..rcv.earth.prob
## 0.6118954
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5798549
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5578602
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5401399
## Party.fctr.All.X..rcv.rpart.prob
## 0.5185594
## Party.fctr.All.X..rcv.nnet.prob
## 0.5039813
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4586497
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4566510
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4364628
## Party.fctr.All.X..rcv.rf.prob
## 0.4151191
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1644842
## [1] "myfit_mdl: enter: 0.001000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.20##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.705000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.303000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2100 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 21 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.922000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 12.264000 secs"
## id
## 1 Ensemble.auto.20##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.586 0.057
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.356000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 21)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.All.X..rcv.glm.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X..rcv.glmnet.prob
## 0.6867738
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.6867694
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.6867585
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6820710
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6799309
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6686895
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6441808
## Party.fctr.All.X..rcv.gbm.prob
## 0.6388483
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6377295
## Party.fctr.All.X..rcv.earth.prob
## 0.6254728
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6237911
## Party.fctr.All.X..rcv.glm.prob
## 0.6172583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5850166
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5579112
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5540296
## Party.fctr.All.X..rcv.rpart.prob
## 0.5267481
## Party.fctr.All.X..rcv.nnet.prob
## 0.5038036
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4618597
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4599527
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4384002
## Party.fctr.All.X..rcv.rf.prob
## 0.4124726
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1674472
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.21##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.681000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.329000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2200 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 22 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.943000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.809000 secs"
## id
## 1 Ensemble.auto.21##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.636 0.06
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.901000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 22)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.bayesglm.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7016875
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7016851
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7016748
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.6968464
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.6949154
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6740585
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6576560
## Party.fctr.All.X..rcv.gbm.prob
## 0.6438984
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6419051
## Party.fctr.All.X..rcv.earth.prob
## 0.6377550
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6261553
## Party.fctr.All.X..rcv.glm.prob
## 0.6194488
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5896870
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5666017
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5579584
## Party.fctr.All.X..rcv.rpart.prob
## 0.5341559
## Party.fctr.All.X..rcv.nnet.prob
## 0.5036447
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4647630
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4629392
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4401511
## Party.fctr.All.X..rcv.rf.prob
## 0.4100792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1701268
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.22##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.705000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.332000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2300 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 23 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.958000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.881000 secs"
## id
## 1 Ensemble.auto.22##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.615 0.062
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 11.974000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 23)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7152472
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7152431
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7152333
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7102784
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7085396
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6789418
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6699038
## Party.fctr.All.X..rcv.earth.prob
## 0.6489183
## Party.fctr.All.X..rcv.gbm.prob
## 0.6484857
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6457011
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6283018
## Party.fctr.All.X..rcv.glm.prob
## 0.6214373
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5939368
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5780302
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5580129
## Party.fctr.All.X..rcv.rpart.prob
## 0.5408954
## Party.fctr.All.X..rcv.nnet.prob
## 0.5034829
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4674036
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4656546
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4417467
## Party.fctr.All.X..rcv.rf.prob
## 0.4079049
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1725687
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.23##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.684000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.438000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2400 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 24 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.054000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.953000 secs"
## id
## 1 Ensemble.auto.23##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.741 0.062
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.050000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 24)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.gbm.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7276278
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7276222
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7276128
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7225423
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7209792
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6834004
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6810866
## Party.fctr.All.X..rcv.earth.prob
## 0.6591108
## Party.fctr.All.X..rcv.gbm.prob
## 0.6526740
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6491669
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6302616
## Party.fctr.All.X..rcv.glm.prob
## 0.6232529
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.5978170
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5884650
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5580627
## Party.fctr.All.X..rcv.rpart.prob
## 0.5470488
## Party.fctr.All.X..rcv.nnet.prob
## 0.5033352
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4698145
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4681340
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4432035
## Party.fctr.All.X..rcv.rf.prob
## 0.4059197
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1747984
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.24##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.708000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.421000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2500 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 25 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.039000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 12.017000 secs"
## id
## 1 Ensemble.auto.24##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.7 0.065
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.114000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 25)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7389766
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7389696
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7389607
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7337843
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7323821
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.6913375
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6874875
## Party.fctr.All.X..rcv.earth.prob
## 0.6684539
## Party.fctr.All.X..rcv.gbm.prob
## 0.6565133
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6523440
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6320582
## Party.fctr.All.X..rcv.glm.prob
## 0.6249172
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.6013739
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.5980303
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5581083
## Party.fctr.All.X..rcv.rpart.prob
## 0.5526895
## Party.fctr.All.X..rcv.nnet.prob
## 0.5031998
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4720245
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4704067
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4445389
## Party.fctr.All.X..rcv.rf.prob
## 0.4040999
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1768422
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.25##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.708000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.401000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2600 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 26 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.016000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 12.075000 secs"
## id
## 1 Ensemble.auto.25##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.68 0.066
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.172000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 26)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.center.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7494175
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7494093
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7494008
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7441269
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7428728
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.7007684
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6912476
## Party.fctr.All.X..rcv.earth.prob
## 0.6770496
## Party.fctr.All.X..rcv.gbm.prob
## 0.6600455
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6552668
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6337110
## Party.fctr.All.X..rcv.glm.prob
## 0.6264484
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.6068303
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.6046462
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5581503
## Party.fctr.All.X..rcv.rpart.prob
## 0.5578789
## Party.fctr.All.X..rcv.nnet.prob
## 0.5030752
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4740578
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4724976
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4457675
## Party.fctr.All.X..rcv.rf.prob
## 0.4024256
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1787225
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.26##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.686000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.354000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2700 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 27 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.969000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.905000 secs"
## id
## 1 Ensemble.auto.26##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.654 0.069
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.003000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 27)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.center.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7590553
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7590459
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7590378
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7536739
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7525564
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.7094738
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6947185
## Party.fctr.All.X..rcv.earth.prob
## 0.6849841
## Party.fctr.All.X..rcv.gbm.prob
## 0.6633059
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6579649
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6352367
## Party.fctr.All.X..rcv.glm.prob
## 0.6278617
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.6149533
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.6076668
## Party.fctr.All.X..rcv.rpart.prob
## 0.5626691
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5581890
## Party.fctr.All.X..rcv.nnet.prob
## 0.5029602
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4759346
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4744277
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4469016
## Party.fctr.All.X..rcv.rf.prob
## 0.4008802
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1804582
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.27##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.678000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.580000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2800 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 28 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.201000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 12.181000 secs"
## id
## 1 Ensemble.auto.27##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.887 0.07
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.279000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 28)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.00
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.center.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7679792
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7679687
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7679609
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7625137
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7615228
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.7175343
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.6979323
## Party.fctr.All.X..rcv.earth.prob
## 0.6923309
## Party.fctr.All.X..rcv.gbm.prob
## 0.6663249
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6604631
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6366493
## Party.fctr.All.X..rcv.glm.prob
## 0.6291704
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.6224747
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.6104636
## Party.fctr.All.X..rcv.rpart.prob
## 0.5671045
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5582249
## Party.fctr.All.X..rcv.nnet.prob
## 0.5028537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4776724
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4762148
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4479517
## Party.fctr.All.X..rcv.rf.prob
## 0.3994493
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1820654
## [1] "myfit_mdl: enter: 0.001000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.28##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.685000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.494000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 2900 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 29 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.113000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 12.138000 secs"
## id
## 1 Ensemble.auto.28##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.795 0.071
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.239000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 29)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.00
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.00
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.center.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7762657
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7762542
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7762467
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7707221
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7698488
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.7250191
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.7009165
## Party.fctr.All.X..rcv.earth.prob
## 0.6991529
## Party.fctr.All.X..rcv.gbm.prob
## 0.6691282
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6627828
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6379611
## Party.fctr.All.X..rcv.glm.prob
## 0.6303856
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.6294589
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.6130607
## Party.fctr.All.X..rcv.rpart.prob
## 0.5712231
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5582582
## Party.fctr.All.X..rcv.nnet.prob
## 0.5027549
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4792860
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4778742
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4489268
## Party.fctr.All.X..rcv.rf.prob
## 0.3981205
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1835577
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Ensemble.auto.29##rcv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.684000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.599000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 3000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 30 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 4.223000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 12.258000 secs"
## id
## 1 Ensemble.auto.29##rcv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.9 0.073
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0008615748 0.001732806
## [1] "myfit_mdl: exit: 12.362000 secs"
## glmnet variable importance
##
## only 20 most important variables shown (out of 30)
##
## Overall
## Party.fctr.All.X..rcv.rf.prob 100.00
## Party.fctr.All.X..rcv.avNNet.prob 37.32
## .rnorm 0.00
## Party.fctr.All.X..rcv.earth.prob 0.00
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.nnet.prob 0.00
## Party.fctr.RFE.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.glmnet.prob 0.00
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.00
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.00
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.00
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.bagEarth.prob 0.00
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.00
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rpart.prob 0.00
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.00
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.00
## Party.fctr.All.X..rcv.rf.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.44434961
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05594012
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.18691638
## Party.fctr.All.X..rcv.rf.prob 1.00000000
## Party.fctr.RFE.X..rcv.glmnet.prob 0.30485184
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.22206127
## Party.fctr.All.X..rcv.nnet.prob 0.58287547
## Party.fctr.All.X..rcv.rpart.prob 0.26899754
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.18355099
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.37640536
## Party.fctr.All.X..rcv.avNNet.prob 0.82103138
## Party.fctr.All.X..rcv.earth.prob 0.33123230
## Party.fctr.All.X..rcv.glm.prob 0.48341240
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.33644872
## Party.fctr.All.X..rcv.bayesglm.prob 0.48425376
## Party.fctr.All.X..rcv.gbm.prob 0.59169058
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.35698959
## Party.fctr.All.X..rcv.bagEarth.prob 0.50067692
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.35557885
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.36218938
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.36221072
## Party.fctr.All.X..rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.center.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X.range.rcv.glmnet.prob 0.36224450
## Party.fctr.All.X..rcv.avNNet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.67165059
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.05918291
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.29307602
## Party.fctr.All.X..rcv.rf.prob 0.82103138
## Party.fctr.RFE.X..rcv.glmnet.prob 0.48686609
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.31214569
## Party.fctr.All.X..rcv.nnet.prob 0.70883910
## Party.fctr.All.X..rcv.rpart.prob 0.38646593
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.28161821
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.58265851
## Party.fctr.All.X..rcv.avNNet.prob 1.00000000
## Party.fctr.All.X..rcv.earth.prob 0.50915042
## Party.fctr.All.X..rcv.glm.prob 0.71224351
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.51224458
## Party.fctr.All.X..rcv.bayesglm.prob 0.71659152
## Party.fctr.All.X..rcv.gbm.prob 0.72230820
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.55476686
## Party.fctr.All.X..rcv.bagEarth.prob 0.71598474
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.55251960
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.55888047
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.55890298
## Party.fctr.All.X..rcv.glmnet.prob 0.55915752
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.center.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X.range.rcv.glmnet.prob 0.55915753
## Party.fctr.All.X..rcv.nnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.63424421
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.04892984
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.22802575
## Party.fctr.All.X..rcv.rf.prob 0.58287547
## Party.fctr.RFE.X..rcv.glmnet.prob 0.42139834
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.26249036
## Party.fctr.All.X..rcv.nnet.prob 1.00000000
## Party.fctr.All.X..rcv.rpart.prob 0.34105280
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.22119074
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.54883471
## Party.fctr.All.X..rcv.avNNet.prob 0.70883910
## Party.fctr.All.X..rcv.earth.prob 0.45048273
## Party.fctr.All.X..rcv.glm.prob 0.69504066
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.44741873
## Party.fctr.All.X..rcv.bayesglm.prob 0.69744545
## Party.fctr.All.X..rcv.gbm.prob 0.65218289
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.49189536
## Party.fctr.All.X..rcv.bagEarth.prob 0.65339698
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.48990118
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.50042634
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.50046713
## Party.fctr.All.X..rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.center.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X.range.rcv.glmnet.prob 0.50008535
## Party.fctr.All.X..rcv.gbm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8082867
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1036913
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3723600
## Party.fctr.All.X..rcv.rf.prob 0.5916906
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6257192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.3721555
## Party.fctr.All.X..rcv.nnet.prob 0.6521829
## Party.fctr.All.X..rcv.rpart.prob 0.5046595
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3603659
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7028339
## Party.fctr.All.X..rcv.avNNet.prob 0.7223082
## Party.fctr.All.X..rcv.earth.prob 0.6812688
## Party.fctr.All.X..rcv.glm.prob 0.7833034
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6535991
## Party.fctr.All.X..rcv.bayesglm.prob 0.7923436
## Party.fctr.All.X..rcv.gbm.prob 1.0000000
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7357435
## Party.fctr.All.X..rcv.bagEarth.prob 0.8389531
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7306909
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7448104
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7449006
## Party.fctr.All.X..rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X.range.rcv.glmnet.prob 0.7448175
## Party.fctr.All.X..rcv.bagEarth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.8911800
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1089841
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.3953001
## Party.fctr.All.X..rcv.rf.prob 0.5006769
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6248532
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4259955
## Party.fctr.All.X..rcv.nnet.prob 0.6533970
## Party.fctr.All.X..rcv.rpart.prob 0.5048896
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.3857298
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.7580066
## Party.fctr.All.X..rcv.avNNet.prob 0.7159847
## Party.fctr.All.X..rcv.earth.prob 0.7441872
## Party.fctr.All.X..rcv.glm.prob 0.9061252
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6895338
## Party.fctr.All.X..rcv.bayesglm.prob 0.9140335
## Party.fctr.All.X..rcv.gbm.prob 0.8389531
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.7670488
## Party.fctr.All.X..rcv.bagEarth.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.7675109
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.7814010
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.7814371
## Party.fctr.All.X..rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.center.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X.range.rcv.glmnet.prob 0.7814906
## Party.fctr.All.X..rcv.bayesglm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.88282772
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09599784
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31711659
## Party.fctr.All.X..rcv.rf.prob 0.48425376
## Party.fctr.RFE.X..rcv.glmnet.prob 0.54200810
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.35293404
## Party.fctr.All.X..rcv.nnet.prob 0.69744545
## Party.fctr.All.X..rcv.rpart.prob 0.42097008
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30844338
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.73644455
## Party.fctr.All.X..rcv.avNNet.prob 0.71659152
## Party.fctr.All.X..rcv.earth.prob 0.63810738
## Party.fctr.All.X..rcv.glm.prob 0.99889858
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.58416282
## Party.fctr.All.X..rcv.bayesglm.prob 1.00000000
## Party.fctr.All.X..rcv.gbm.prob 0.79234357
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.66197687
## Party.fctr.All.X..rcv.bagEarth.prob 0.91403349
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.65784245
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.67342431
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.67343809
## Party.fctr.All.X..rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.center.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X.range.rcv.glmnet.prob 0.67337849
## Party.fctr.All.X..rcv.glm.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.87238630
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.09460921
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.31052585
## Party.fctr.All.X..rcv.rf.prob 0.48341240
## Party.fctr.RFE.X..rcv.glmnet.prob 0.53232338
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.34606011
## Party.fctr.All.X..rcv.nnet.prob 0.69504066
## Party.fctr.All.X..rcv.rpart.prob 0.41412901
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30232318
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.72677167
## Party.fctr.All.X..rcv.avNNet.prob 0.71224351
## Party.fctr.All.X..rcv.earth.prob 0.62951342
## Party.fctr.All.X..rcv.glm.prob 1.00000000
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.57507376
## Party.fctr.All.X..rcv.bayesglm.prob 0.99889858
## Party.fctr.All.X..rcv.gbm.prob 0.78330340
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.65178982
## Party.fctr.All.X..rcv.bagEarth.prob 0.90612520
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.64738779
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.66324781
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.66326077
## Party.fctr.All.X..rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.range.rcv.glmnet.prob 0.66319583
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 1.00000000
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.06921113
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.37086950
## Party.fctr.All.X..rcv.rf.prob 0.44434961
## Party.fctr.RFE.X..rcv.glmnet.prob 0.59075182
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.39360723
## Party.fctr.All.X..rcv.nnet.prob 0.63424421
## Party.fctr.All.X..rcv.rpart.prob 0.46496974
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.35388921
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.85235576
## Party.fctr.All.X..rcv.avNNet.prob 0.67165059
## Party.fctr.All.X..rcv.earth.prob 0.67006506
## Party.fctr.All.X..rcv.glm.prob 0.87238630
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.63088912
## Party.fctr.All.X..rcv.bayesglm.prob 0.88282772
## Party.fctr.All.X..rcv.gbm.prob 0.80828671
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.71532332
## Party.fctr.All.X..rcv.bagEarth.prob 0.89118004
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.71236524
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.72536860
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.72541681
## Party.fctr.All.X..rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.center.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.range.rcv.glmnet.prob 0.72541583
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.852355765
## Party.fctr.All.X.ica.rcv.glmnet.prob -0.009567133
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.380507275
## Party.fctr.All.X..rcv.rf.prob 0.376405358
## Party.fctr.RFE.X..rcv.glmnet.prob 0.613182343
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.381804540
## Party.fctr.All.X..rcv.nnet.prob 0.548834711
## Party.fctr.All.X..rcv.rpart.prob 0.478386763
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.352759329
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 1.000000000
## Party.fctr.All.X..rcv.avNNet.prob 0.582658505
## Party.fctr.All.X..rcv.earth.prob 0.608517454
## Party.fctr.All.X..rcv.glm.prob 0.726771671
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.581352736
## Party.fctr.All.X..rcv.bayesglm.prob 0.736444552
## Party.fctr.All.X..rcv.gbm.prob 0.702833931
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.674448549
## Party.fctr.All.X..rcv.bagEarth.prob 0.758006626
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.671540413
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.683087856
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.683096130
## Party.fctr.All.X..rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.center.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.range.rcv.glmnet.prob 0.683181734
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254168
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237187
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.rf.prob 0.3622107
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180426
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.nnet.prob 0.5004671
## Party.fctr.All.X..rcv.rpart.prob 0.6823105
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226685
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830961
## Party.fctr.All.X..rcv.avNNet.prob 0.5589030
## Party.fctr.All.X..rcv.earth.prob 0.8833991
## Party.fctr.All.X..rcv.glm.prob 0.6632608
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734381
## Party.fctr.All.X..rcv.gbm.prob 0.7449006
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814371
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.range.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7253686
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2237432
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228501
## Party.fctr.All.X..rcv.rf.prob 0.3621894
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8179341
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752093
## Party.fctr.All.X..rcv.nnet.prob 0.5004263
## Party.fctr.All.X..rcv.rpart.prob 0.6823338
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226850
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6830879
## Party.fctr.All.X..rcv.avNNet.prob 0.5588805
## Party.fctr.All.X..rcv.earth.prob 0.8834434
## Party.fctr.All.X..rcv.glm.prob 0.6632478
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X..rcv.bayesglm.prob 0.6734243
## Party.fctr.All.X..rcv.gbm.prob 0.7448104
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946031
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814010
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999995
## Party.fctr.All.X..rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.range.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7254158
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2238504
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5228551
## Party.fctr.All.X..rcv.rf.prob 0.3622445
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8180305
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X..rcv.nnet.prob 0.5000854
## Party.fctr.All.X..rcv.rpart.prob 0.6824249
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5226792
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6831817
## Party.fctr.All.X..rcv.avNNet.prob 0.5591575
## Party.fctr.All.X..rcv.earth.prob 0.8833465
## Party.fctr.All.X..rcv.glm.prob 0.6631958
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X..rcv.bayesglm.prob 0.6733785
## Party.fctr.All.X..rcv.gbm.prob 0.7448175
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.bagEarth.prob 0.7814906
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9999625
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9999615
## Party.fctr.All.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.scale.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.center.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.zv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.range.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7123652
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2192433
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5292805
## Party.fctr.All.X..rcv.rf.prob 0.3555789
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8241202
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4795723
## Party.fctr.All.X..rcv.nnet.prob 0.4899012
## Party.fctr.All.X..rcv.rpart.prob 0.6869501
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5292464
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6715404
## Party.fctr.All.X..rcv.avNNet.prob 0.5525196
## Party.fctr.All.X..rcv.earth.prob 0.8768761
## Party.fctr.All.X..rcv.glm.prob 0.6473878
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X..rcv.bayesglm.prob 0.6578425
## Party.fctr.All.X..rcv.gbm.prob 0.7306909
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9865002
## Party.fctr.All.X..rcv.bagEarth.prob 0.7675109
## Party.fctr.All.X.nzv.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9923451
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9923540
## Party.fctr.All.X..rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9923493
## Party.fctr.All.X.range.rcv.glmnet.prob 0.9923493
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.7153233
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2155047
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.rf.prob 0.3569896
## Party.fctr.RFE.X..rcv.glmnet.prob 0.8209720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.nnet.prob 0.4918954
## Party.fctr.All.X..rcv.rpart.prob 0.6830104
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5249946
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6744485
## Party.fctr.All.X..rcv.avNNet.prob 0.5547669
## Party.fctr.All.X..rcv.earth.prob 0.8689877
## Party.fctr.All.X..rcv.glm.prob 0.6517898
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bayesglm.prob 0.6619769
## Party.fctr.All.X..rcv.gbm.prob 0.7357435
## Party.fctr.Low.cor.X..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bagEarth.prob 0.7670488
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9865002
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9946031
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9946048
## Party.fctr.All.X..rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X.range.rcv.glmnet.prob 0.9946489
## Party.fctr.All.X..rcv.earth.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6700651
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1420945
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.4774014
## Party.fctr.All.X..rcv.rf.prob 0.3312323
## Party.fctr.RFE.X..rcv.glmnet.prob 0.6556800
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4471574
## Party.fctr.All.X..rcv.nnet.prob 0.4504827
## Party.fctr.All.X..rcv.rpart.prob 0.6121520
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.4683211
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.6085175
## Party.fctr.All.X..rcv.avNNet.prob 0.5091504
## Party.fctr.All.X..rcv.earth.prob 1.0000000
## Party.fctr.All.X..rcv.glm.prob 0.6295134
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.8148176
## Party.fctr.All.X..rcv.bayesglm.prob 0.6381074
## Party.fctr.All.X..rcv.gbm.prob 0.6812688
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.8689877
## Party.fctr.All.X..rcv.bagEarth.prob 0.7441872
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.8768761
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.8834434
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.8833991
## Party.fctr.All.X..rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.center.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.range.rcv.glmnet.prob 0.8833465
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.6308891
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2234457
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.rf.prob 0.3364487
## Party.fctr.RFE.X..rcv.glmnet.prob 0.7602901
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.nnet.prob 0.4474187
## Party.fctr.All.X..rcv.rpart.prob 0.6635718
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.5798453
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.5813527
## Party.fctr.All.X..rcv.avNNet.prob 0.5122446
## Party.fctr.All.X..rcv.earth.prob 0.8148176
## Party.fctr.All.X..rcv.glm.prob 0.5750738
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.bayesglm.prob 0.5841628
## Party.fctr.All.X..rcv.gbm.prob 0.6535991
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.9321857
## Party.fctr.All.X..rcv.bagEarth.prob 0.6895338
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.9319493
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.9271877
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.9271592
## Party.fctr.All.X..rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.center.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.9271085
## Party.fctr.All.X.range.rcv.glmnet.prob 0.9271085
## Party.fctr.RFE.X..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.59075182
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.03712174
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.32079312
## Party.fctr.All.X..rcv.rf.prob 0.30485184
## Party.fctr.RFE.X..rcv.glmnet.prob 1.00000000
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.27274431
## Party.fctr.All.X..rcv.nnet.prob 0.42139834
## Party.fctr.All.X..rcv.rpart.prob 0.52072087
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.30826132
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.61318234
## Party.fctr.All.X..rcv.avNNet.prob 0.48686609
## Party.fctr.All.X..rcv.earth.prob 0.65568002
## Party.fctr.All.X..rcv.glm.prob 0.53232338
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.76029008
## Party.fctr.All.X..rcv.bayesglm.prob 0.54200810
## Party.fctr.All.X..rcv.gbm.prob 0.62571918
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.82097196
## Party.fctr.All.X..rcv.bagEarth.prob 0.62485318
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.82412022
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.81793414
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.81804259
## Party.fctr.All.X..rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.center.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X.range.rcv.glmnet.prob 0.81803046
## Party.fctr.All.X..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.4649697
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1956013
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.6071103
## Party.fctr.All.X..rcv.rf.prob 0.2689975
## Party.fctr.RFE.X..rcv.glmnet.prob 0.5207209
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.4863653
## Party.fctr.All.X..rcv.nnet.prob 0.3410528
## Party.fctr.All.X..rcv.rpart.prob 1.0000000
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.6126261
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.4783868
## Party.fctr.All.X..rcv.avNNet.prob 0.3864659
## Party.fctr.All.X..rcv.earth.prob 0.6121520
## Party.fctr.All.X..rcv.glm.prob 0.4141290
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.6635718
## Party.fctr.All.X..rcv.bayesglm.prob 0.4209701
## Party.fctr.All.X..rcv.gbm.prob 0.5046595
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.6830104
## Party.fctr.All.X..rcv.bagEarth.prob 0.5048896
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.6869501
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.6823338
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.6823105
## Party.fctr.All.X..rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.center.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.6824249
## Party.fctr.All.X.range.rcv.glmnet.prob 0.6824249
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3936072
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1475638
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.rf.prob 0.2220613
## Party.fctr.RFE.X..rcv.glmnet.prob 0.2727443
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.nnet.prob 0.2624904
## Party.fctr.All.X..rcv.rpart.prob 0.4863653
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.7287406
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3818045
## Party.fctr.All.X..rcv.avNNet.prob 0.3121457
## Party.fctr.All.X..rcv.earth.prob 0.4471574
## Party.fctr.All.X..rcv.glm.prob 0.3460601
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.4687519
## Party.fctr.All.X..rcv.bayesglm.prob 0.3529340
## Party.fctr.All.X..rcv.gbm.prob 0.3721555
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.4366224
## Party.fctr.All.X..rcv.bagEarth.prob 0.4259955
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.4795723
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.4752093
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.4751697
## Party.fctr.All.X..rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.center.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.4752537
## Party.fctr.All.X.range.rcv.glmnet.prob 0.4752537
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3708695
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.1080593
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 1.0000000
## Party.fctr.All.X..rcv.rf.prob 0.1869164
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3207931
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7560218
## Party.fctr.All.X..rcv.nnet.prob 0.2280258
## Party.fctr.All.X..rcv.rpart.prob 0.6071103
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.9648766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3805073
## Party.fctr.All.X..rcv.avNNet.prob 0.2930760
## Party.fctr.All.X..rcv.earth.prob 0.4774014
## Party.fctr.All.X..rcv.glm.prob 0.3105258
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5708480
## Party.fctr.All.X..rcv.bayesglm.prob 0.3171166
## Party.fctr.All.X..rcv.gbm.prob 0.3723600
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5252550
## Party.fctr.All.X..rcv.bagEarth.prob 0.3953001
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292805
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5228501
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5228300
## Party.fctr.All.X..rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.5228551
## Party.fctr.All.X.range.rcv.glmnet.prob 0.5228551
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.3538892
## Party.fctr.All.X.ica.rcv.glmnet.prob 0.2095866
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.9648766
## Party.fctr.All.X..rcv.rf.prob 0.1835510
## Party.fctr.RFE.X..rcv.glmnet.prob 0.3082613
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.7287406
## Party.fctr.All.X..rcv.nnet.prob 0.2211907
## Party.fctr.All.X..rcv.rpart.prob 0.6126261
## Party.fctr.Max.cor.Y..rcv.rpart.prob 1.0000000
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob 0.3527593
## Party.fctr.All.X..rcv.avNNet.prob 0.2816182
## Party.fctr.All.X..rcv.earth.prob 0.4683211
## Party.fctr.All.X..rcv.glm.prob 0.3023232
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.5798453
## Party.fctr.All.X..rcv.bayesglm.prob 0.3084434
## Party.fctr.All.X..rcv.gbm.prob 0.3603659
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.5249946
## Party.fctr.All.X..rcv.bagEarth.prob 0.3857298
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.5292464
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.5226850
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.5226685
## Party.fctr.All.X..rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.center.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.range.rcv.glmnet.prob 0.5226792
## Party.fctr.All.X.ica.rcv.glmnet.prob
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob 0.069211125
## Party.fctr.All.X.ica.rcv.glmnet.prob 1.000000000
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob 0.108059255
## Party.fctr.All.X..rcv.rf.prob 0.055940119
## Party.fctr.RFE.X..rcv.glmnet.prob 0.037121740
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob 0.147563788
## Party.fctr.All.X..rcv.nnet.prob 0.048929835
## Party.fctr.All.X..rcv.rpart.prob 0.195601286
## Party.fctr.Max.cor.Y..rcv.rpart.prob 0.209586621
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob -0.009567133
## Party.fctr.All.X..rcv.avNNet.prob 0.059182907
## Party.fctr.All.X..rcv.earth.prob 0.142094538
## Party.fctr.All.X..rcv.glm.prob 0.094609212
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob 0.223445660
## Party.fctr.All.X..rcv.bayesglm.prob 0.095997840
## Party.fctr.All.X..rcv.gbm.prob 0.103691321
## Party.fctr.Low.cor.X..rcv.glmnet.prob 0.215504670
## Party.fctr.All.X..rcv.bagEarth.prob 0.108984097
## Party.fctr.All.X.nzv.rcv.glmnet.prob 0.219243275
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob 0.223743171
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob 0.223718696
## Party.fctr.All.X..rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.scale.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.center.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.zv.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob 0.223850420
## Party.fctr.All.X.range.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.zv.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.center.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X..rcv.glmnet.prob
## 0.7839806
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 0.7839682
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 0.7839610
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 0.7783645
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 0.7776005
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 0.7319877
## Party.fctr.All.X..rcv.earth.prob
## 0.7055044
## Party.fctr.All.X..rcv.bagEarth.prob
## 0.7036949
## Party.fctr.All.X..rcv.gbm.prob
## 0.6717382
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 0.6649426
## Party.fctr.All.X..rcv.bayesglm.prob
## 0.6391824
## Party.fctr.RFE.X..rcv.glmnet.prob
## 0.6359613
## Party.fctr.All.X..rcv.glm.prob
## 0.6315170
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 0.6154787
## Party.fctr.All.X..rcv.rpart.prob
## 0.5750577
## Party.fctr.All.X..rcv.avNNet.prob
## 0.5582892
## Party.fctr.All.X..rcv.nnet.prob
## 0.5026628
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 0.4807884
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## 0.4794192
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 0.4498346
## Party.fctr.All.X..rcv.rf.prob
## 0.3968834
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 0.1849471
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: All.X##boot#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.712000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.913000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 3000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 30 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.541000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.594000 secs"
## id
## 1 All.X##boot#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.185 0.073
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 1
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 1
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0 0
## [1] "myfit_mdl: exit: 11.696000 secs"
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: All.X##boot632#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.681000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 3.110000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 3000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 30 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.739000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.827000 secs"
## id
## 1 All.X##boot632#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.414 0.074
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9997887
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9995751
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit max.AccuracyApparent.fit
## 1 0 0 0.9994256
## max.KappaApparent.fit
## 1 0.998845
## [1] "myfit_mdl: exit: 11.934000 secs"
## [1] "myfit_mdl: enter: 0.001000 secs"
## [1] "myfit_mdl: fitting model: All.X##cv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.694000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.820000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 3000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 30 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.444000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.438000 secs"
## id
## 1 All.X##cv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.109 0.073
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994263
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988459
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0009937182 0.001998895
## [1] "myfit_mdl: exit: 11.543000 secs"
## [1] "skipping fitting model: All.X##rcv#glmnet"
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: All.X##LGOCV#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.694000 secs"
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.55, lambda = 0.213 on full training set
## [1] "myfit_mdl: train complete: 2.866000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: lambda
## Length Class Mode
## a0 100 -none- numeric
## beta 3000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 30 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.101876 1.115379
## Party.fctr.All.X..rcv.rf.prob
## 2.988838
## [1] "max lambda < lambdaOpt:"
## (Intercept) Party.fctr.All.X..rcv.avNNet.prob
## -2.234395 1.190343
## Party.fctr.All.X..rcv.rf.prob
## 3.188620
## [1] "myfit_mdl: train diagnostics complete: 3.488000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 9 0.40 0.99938 0.9994256
## 10 0.45 0.99938 0.9994256
## 11 0.50 0.99938 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 129 108
## R 75 131
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58690745 0.17835751 0.53947331 0.63317324 0.53498871
## AccuracyPValue McnemarPValue
## 0.01582648 0.01800535
## [1] "myfit_mdl: predict complete: 11.765000 secs"
## id
## 1 All.X##LGOCV#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 2.158 0.073
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 0.9999967
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.999232
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.998455
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.574577 0.6540084 0.4951456 0.6066527
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.588764 0.5869074
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5394733 0.6331732 0.1783575
## max.AccuracySD.fit max.KappaSD.fit
## 1 0.0013303 0.002676058
## [1] "myfit_mdl: exit: 11.872000 secs"
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: All.X##adaptive_cv#glmnet"
## [1] " indepVar: Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob"
## [1] "myfit_mdl: setup complete: 0.691000 secs"
## o 2 eliminated;23 remain
## o 21 models of 23 were eliminated due to linear dependencies
## o no models eliminated; 23 remain
## + Fold1.Rep3: alpha=0.1, lambda=0.04589
## - Fold1.Rep3: alpha=0.1, lambda=0.04589
## o no models eliminated; 2 remain
## + Fold2.Rep3: alpha=0.1, lambda=0.04589
## - Fold2.Rep3: alpha=0.1, lambda=0.04589
## o no models eliminated; 2 remain
## + Fold3.Rep3: alpha=0.1, lambda=0.04589
## - Fold3.Rep3: alpha=0.1, lambda=0.04589
## o no models eliminated; 2 remain
## Aggregating results
## Selecting tuning parameters
## Fitting alpha = 0.1, lambda = 0.00989 on full training set
## [1] "myfit_mdl: train complete: 5.599000 secs"## Warning in myfit_mdl(mdl_specs_lst = thsMdlSpecs, indepVar = thsIndepVar, :
## model's bestTune found at an extreme of tuneGrid for parameter: alpha
## Length Class Mode
## a0 100 -none- numeric
## beta 3000 dgCMatrix S4
## df 100 -none- numeric
## dim 2 -none- numeric
## lambda 100 -none- numeric
## dev.ratio 100 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 30 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept)
## -3.89356081
## Party.fctr.All.X..rcv.avNNet.prob
## 3.30549674
## Party.fctr.All.X..rcv.bayesglm.prob
## -0.11386313
## Party.fctr.All.X..rcv.gbm.prob
## 1.43595777
## Party.fctr.All.X..rcv.glm.prob
## -0.03154877
## Party.fctr.All.X..rcv.glmnet.prob
## -0.19492118
## Party.fctr.All.X..rcv.nnet.prob
## 0.77675215
## Party.fctr.All.X..rcv.rf.prob
## 8.78577198
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## -0.21234914
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## -0.20657719
## Party.fctr.All.X.center.rcv.glmnet.prob
## -0.24043129
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## -0.24579892
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## -0.24687873
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## -0.22778513
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## -0.29738824
## Party.fctr.All.X.range.rcv.glmnet.prob
## -0.21709308
## Party.fctr.All.X.scale.rcv.glmnet.prob
## -0.22337481
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## -0.44821768
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## -0.98869138
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## -0.54639245
## Party.fctr.All.X.zv.rcv.glmnet.prob
## -0.20638553
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## -0.35825249
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## -0.21096825
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## -0.39534986
## Party.fctr.RFE.X..rcv.glmnet.prob
## -1.06852908
## [1] "max lambda < lambdaOpt:"
## (Intercept)
## -3.9378528
## Party.fctr.All.X..rcv.avNNet.prob
## 3.3539623
## Party.fctr.All.X..rcv.bayesglm.prob
## -0.1319332
## Party.fctr.All.X..rcv.gbm.prob
## 1.4523320
## Party.fctr.All.X..rcv.glm.prob
## -0.0465089
## Party.fctr.All.X..rcv.glmnet.prob
## -0.1965423
## Party.fctr.All.X..rcv.nnet.prob
## 0.7823387
## Party.fctr.All.X..rcv.rf.prob
## 9.0050065
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## -0.2148063
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## -0.2078864
## Party.fctr.All.X.center.rcv.glmnet.prob
## -0.2427204
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## -0.2476440
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## -0.2485052
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## -0.2283510
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## -0.2999626
## Party.fctr.All.X.range.rcv.glmnet.prob
## -0.2186854
## Party.fctr.All.X.scale.rcv.glmnet.prob
## -0.2254159
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## -0.4661904
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## -1.0215993
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## -0.5745642
## Party.fctr.All.X.zv.rcv.glmnet.prob
## -0.2083021
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## -0.3669093
## Party.fctr.Max.cor.Y..rcv.rpart.prob
## -0.2199692
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## -0.4118597
## Party.fctr.RFE.X..rcv.glmnet.prob
## -1.1069381
## [1] "myfit_mdl: train diagnostics complete: 6.307000 secs"
## [1] "mypredict_mdl: maxMetricDf:"
## threshold f.score accuracy
## 6 0.25 0.9993808 0.9994256
## 7 0.30 0.9993800 0.9994256
## 8 0.35 0.9993800 0.9994256
## 9 0.40 0.9993800 0.9994256
## 10 0.45 0.9993800 0.9994256
## 11 0.50 0.9993800 0.9994256
## 12 0.55 0.9993800 0.9994256
## 13 0.60 0.9993800 0.9994256
## 14 0.65 0.9993800 0.9994256
## 15 0.70 0.9993800 0.9994256
## Prediction
## Reference D R
## D 934 0
## R 1 806
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.9994256 0.9988450 0.9968039 0.9999855 0.5364733
## AccuracyPValue McnemarPValue
## 0.0000000 1.0000000
## Prediction
## Reference D R
## D 139 98
## R 84 122
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 0.58916479 0.17794001 0.54175284 0.63537801 0.53498871
## AccuracyPValue McnemarPValue
## 0.01239251 0.33523441
## [1] "myfit_mdl: predict complete: 16.503000 secs"
## id
## 1 All.X##adaptive_cv#glmnet
## feats
## 1 Party.fctr.All.X.zv.pca.rcv.glmnet.prob,.rnorm,Party.fctr.All.X.ica.rcv.glmnet.prob,Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob,Party.fctr.All.X..rcv.rf.prob,Party.fctr.RFE.X..rcv.glmnet.prob,Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob,Party.fctr.All.X..rcv.nnet.prob,Party.fctr.All.X..rcv.rpart.prob,Party.fctr.Max.cor.Y..rcv.rpart.prob,Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob,Party.fctr.All.X..rcv.avNNet.prob,Party.fctr.All.X..rcv.earth.prob,Party.fctr.All.X..rcv.glm.prob,Party.fctr.All.X.spatialSign.rcv.glmnet.prob,Party.fctr.All.X..rcv.bayesglm.prob,Party.fctr.All.X..rcv.gbm.prob,Party.fctr.Low.cor.X..rcv.glmnet.prob,Party.fctr.All.X..rcv.bagEarth.prob,Party.fctr.All.X.nzv.rcv.glmnet.prob,Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob,Party.fctr.All.X.expoTrans.rcv.glmnet.prob,Party.fctr.All.X..rcv.glmnet.prob,Party.fctr.All.X.center.scale.rcv.glmnet.prob,Party.fctr.All.X.scale.rcv.glmnet.prob,Party.fctr.All.X.center.rcv.glmnet.prob,Party.fctr.All.X.zv.rcv.glmnet.prob,Party.fctr.All.X.conditionalX.rcv.glmnet.prob,Party.fctr.All.X.BoxCox.rcv.glmnet.prob,Party.fctr.All.X.range.rcv.glmnet.prob
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 25 4.892 0.126
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.9993804 1 0.9987608 1
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.5 0.99938 0.9994256
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.9968039 0.9999855 0.9988448
## max.AUCpROC.OOB max.Sens.OOB max.Spec.OOB max.AUCROCR.OOB
## 1 0.5777518 0.6118143 0.5436893 0.5972512
## opt.prob.threshold.OOB max.f.score.OOB max.Accuracy.OOB
## 1 0.45 0.57277 0.5891648
## max.AccuracyLower.OOB max.AccuracyUpper.OOB max.Kappa.OOB
## 1 0.5417528 0.635378 0.17794
## max.AccuracySD.fit max.KappaSD.fit max..B.fit
## 1 0.0008615748 0.001732806 9
## [1] "myfit_mdl: exit: 16.618000 secs"
## glmnet
##
## 1741 samples
## 108 predictor
## 2 classes: 'D', 'R'
##
## Pre-processing: principal component signal extraction (263),
## centered (263), scaled (263), remove (4)
## Resampling: Cross-Validated (3 fold, repeated 3 times)
## Summary of sample sizes: 1161, 1160, 1161, 1161, 1160, 1161, ...
## Resampling results across tuning parameters:
##
## alpha lambda Accuracy Kappa
## 0.100 4.831424e-05 0.5646141 0.12053216
## 0.100 2.242548e-04 0.5646141 0.12053216
## 0.100 1.040899e-03 0.5646141 0.12053216
## 0.100 4.831424e-03 0.5648047 0.12069765
## 0.100 2.242548e-02 0.5686312 0.12610527
## 0.325 4.831424e-05 0.5646145 0.12058463
## 0.325 2.242548e-04 0.5646145 0.12058463
## 0.325 1.040899e-03 0.5646141 0.12058350
## 0.325 4.831424e-03 0.5671016 0.12474824
## 0.325 2.242548e-02 0.5684373 0.12310831
## 0.550 4.831424e-05 0.5642313 0.11985724
## 0.550 2.242548e-04 0.5642313 0.11985724
## 0.550 1.040899e-03 0.5659541 0.12316888
## 0.550 4.831424e-03 0.5676743 0.12499089
## 0.550 2.242548e-02 0.5663277 0.11357163
## 0.775 4.831424e-05 0.5644229 0.12022091
## 0.775 2.242548e-04 0.5644229 0.12022091
## 0.775 1.040899e-03 0.5661444 0.12358209
## 0.775 4.831424e-03 0.5686295 0.12644937
## 0.775 2.242548e-02 0.5611616 0.09700507
## 1.000 4.831424e-05 0.5642313 0.11985724
## 1.000 2.242548e-04 0.5642313 0.11985991
## 1.000 1.040899e-03 0.5663363 0.12374996
## 1.000 4.831424e-03 0.5690120 0.12693372
## 1.000 2.242548e-02 0.5584819 0.08405071
##
## Accuracy was used to select the optimal model using the largest value.
## The final values used for the model were alpha = 1 and lambda
## = 0.004831424.## [1] "All.X#zv.pca#rcv#glmnet fit prediction diagnostics:"## [1] "All.X#zv.pca#rcv#glmnet OOB prediction diagnostics:"## All.X.zv.pca.rcv.glmnet.imp imp
## PC176 1.000000e+02 1.000000e+02
## PC143 9.275090e+01 9.275090e+01
## PC16 8.520516e+01 8.520516e+01
## PC170 7.479393e+01 7.479393e+01
## PC35 7.315796e+01 7.315796e+01
## PC144 7.010065e+01 7.010065e+01
## PC128 6.982828e+01 6.982828e+01
## PC78 6.978608e+01 6.978608e+01
## PC130 6.950057e+01 6.950057e+01
## PC33 6.838701e+01 6.838701e+01
## PC111 6.230038e+01 6.230038e+01
## PC110 6.055558e+01 6.055558e+01
## PC123 5.724446e+01 5.724446e+01
## PC166 5.488771e+01 5.488771e+01
## PC73 5.291358e+01 5.291358e+01
## PC165 5.257870e+01 5.257870e+01
## PC29 5.254738e+01 5.254738e+01
## PC20 5.129963e+01 5.129963e+01
## PC163 5.034326e+01 5.034326e+01
## PC21 4.988859e+01 4.988859e+01
## PC17 4.985385e+01 4.985385e+01
## PC115 4.921876e+01 4.921876e+01
## PC106 4.872059e+01 4.872059e+01
## PC113 4.852200e+01 4.852200e+01
## PC47 4.830536e+01 4.830536e+01
## PC14 4.646959e+01 4.646959e+01
## PC138 4.559336e+01 4.559336e+01
## PC44 4.445818e+01 4.445818e+01
## PC174 4.419996e+01 4.419996e+01
## PC169 4.175077e+01 4.175077e+01
## PC122 4.042866e+01 4.042866e+01
## PC27 4.033550e+01 4.033550e+01
## PC53 3.961769e+01 3.961769e+01
## PC168 3.922960e+01 3.922960e+01
## PC87 3.885272e+01 3.885272e+01
## PC83 3.881538e+01 3.881538e+01
## PC74 3.832925e+01 3.832925e+01
## PC10 3.822141e+01 3.822141e+01
## PC70 3.815807e+01 3.815807e+01
## PC137 3.728419e+01 3.728419e+01
## PC155 3.706870e+01 3.706870e+01
## PC124 3.662386e+01 3.662386e+01
## PC8 3.601150e+01 3.601150e+01
## PC147 3.586515e+01 3.586515e+01
## PC45 3.501084e+01 3.501084e+01
## PC153 3.481962e+01 3.481962e+01
## PC6 3.450937e+01 3.450937e+01
## PC15 3.401918e+01 3.401918e+01
## PC11 3.376872e+01 3.376872e+01
## PC55 3.366349e+01 3.366349e+01
## PC9 3.351613e+01 3.351613e+01
## PC91 3.343727e+01 3.343727e+01
## PC89 3.230346e+01 3.230346e+01
## PC13 3.070796e+01 3.070796e+01
## PC180 2.996555e+01 2.996555e+01
## PC34 2.985494e+01 2.985494e+01
## PC136 2.984962e+01 2.984962e+01
## PC7 2.909991e+01 2.909991e+01
## PC28 2.888611e+01 2.888611e+01
## PC154 2.783634e+01 2.783634e+01
## PC58 2.727390e+01 2.727390e+01
## PC135 2.697665e+01 2.697665e+01
## PC75 2.638460e+01 2.638460e+01
## PC171 2.531038e+01 2.531038e+01
## PC120 2.489996e+01 2.489996e+01
## PC146 2.488196e+01 2.488196e+01
## PC86 2.485278e+01 2.485278e+01
## PC94 2.450185e+01 2.450185e+01
## PC156 2.446547e+01 2.446547e+01
## PC159 2.441279e+01 2.441279e+01
## PC131 2.388039e+01 2.388039e+01
## PC145 2.367954e+01 2.367954e+01
## PC18 2.357931e+01 2.357931e+01
## PC24 2.329016e+01 2.329016e+01
## PC90 2.319657e+01 2.319657e+01
## PC4 2.088729e+01 2.088729e+01
## PC26 2.038367e+01 2.038367e+01
## PC60 1.935100e+01 1.935100e+01
## PC30 1.897980e+01 1.897980e+01
## PC38 1.838838e+01 1.838838e+01
## PC66 1.699096e+01 1.699096e+01
## PC148 1.685374e+01 1.685374e+01
## PC98 1.638492e+01 1.638492e+01
## PC167 1.633314e+01 1.633314e+01
## PC152 1.613821e+01 1.613821e+01
## PC117 1.613769e+01 1.613769e+01
## PC52 1.524829e+01 1.524829e+01
## PC69 1.487455e+01 1.487455e+01
## PC132 1.432095e+01 1.432095e+01
## PC36 1.345465e+01 1.345465e+01
## PC112 1.338934e+01 1.338934e+01
## PC57 1.296634e+01 1.296634e+01
## PC59 1.263362e+01 1.263362e+01
## PC64 1.202000e+01 1.202000e+01
## PC99 1.130747e+01 1.130747e+01
## PC141 1.112507e+01 1.112507e+01
## PC161 1.062154e+01 1.062154e+01
## PC77 1.028165e+01 1.028165e+01
## PC48 1.022987e+01 1.022987e+01
## PC95 9.695666e+00 9.695666e+00
## PC178 9.244490e+00 9.244490e+00
## PC49 8.930977e+00 8.930977e+00
## PC2 8.646527e+00 8.646527e+00
## PC37 7.602710e+00 7.602710e+00
## PC79 7.362601e+00 7.362601e+00
## PC23 6.975107e+00 6.975107e+00
## PC102 6.930198e+00 6.930198e+00
## PC63 6.468828e+00 6.468828e+00
## PC119 5.347449e+00 5.347449e+00
## PC19 5.092883e+00 5.092883e+00
## PC139 4.823095e+00 4.823095e+00
## PC100 4.532840e+00 4.532840e+00
## PC1 4.431252e+00 4.431252e+00
## PC177 4.053201e+00 4.053201e+00
## PC54 4.050821e+00 4.050821e+00
## PC92 3.818783e+00 3.818783e+00
## PC3 3.679924e+00 3.679924e+00
## PC162 3.612958e+00 3.612958e+00
## PC109 2.867807e+00 2.867807e+00
## PC97 2.642836e+00 2.642836e+00
## PC88 1.815422e+00 1.815422e+00
## PC84 1.476555e+00 1.476555e+00
## PC114 1.271674e+00 1.271674e+00
## PC101 1.176511e+00 1.176511e+00
## PC107 9.153527e-01 9.153527e-01
## PC142 6.509297e-01 6.509297e-01
## PC172 5.303319e-01 5.303319e-01
## PC164 1.321090e-01 1.321090e-01
## PC12 8.425935e-03 8.425935e-03
## PC5 0.000000e+00 0.000000e+00
## PC22 0.000000e+00 0.000000e+00
## PC25 0.000000e+00 0.000000e+00
## PC31 0.000000e+00 0.000000e+00
## PC32 0.000000e+00 0.000000e+00
## PC39 0.000000e+00 0.000000e+00
## PC40 0.000000e+00 0.000000e+00
## PC41 0.000000e+00 0.000000e+00
## PC42 0.000000e+00 0.000000e+00
## PC43 0.000000e+00 0.000000e+00
## PC46 0.000000e+00 0.000000e+00
## PC50 0.000000e+00 0.000000e+00
## PC51 0.000000e+00 0.000000e+00
## PC56 0.000000e+00 0.000000e+00
## PC61 0.000000e+00 0.000000e+00
## PC62 0.000000e+00 0.000000e+00
## PC65 0.000000e+00 0.000000e+00
## PC67 0.000000e+00 0.000000e+00
## PC68 0.000000e+00 0.000000e+00
## PC71 0.000000e+00 0.000000e+00
## PC72 0.000000e+00 0.000000e+00
## PC76 0.000000e+00 0.000000e+00
## PC80 0.000000e+00 0.000000e+00
## PC81 0.000000e+00 0.000000e+00
## PC82 0.000000e+00 0.000000e+00
## PC85 0.000000e+00 0.000000e+00
## PC93 0.000000e+00 0.000000e+00
## PC96 0.000000e+00 0.000000e+00
## PC103 0.000000e+00 0.000000e+00
## PC104 0.000000e+00 0.000000e+00
## PC105 0.000000e+00 0.000000e+00
## PC108 0.000000e+00 0.000000e+00
## PC116 0.000000e+00 0.000000e+00
## PC118 0.000000e+00 0.000000e+00
## PC121 0.000000e+00 0.000000e+00
## PC125 0.000000e+00 0.000000e+00
## PC126 0.000000e+00 0.000000e+00
## PC127 0.000000e+00 0.000000e+00
## PC129 0.000000e+00 0.000000e+00
## PC133 0.000000e+00 0.000000e+00
## PC134 0.000000e+00 0.000000e+00
## PC140 0.000000e+00 0.000000e+00
## PC149 0.000000e+00 0.000000e+00
## PC150 0.000000e+00 0.000000e+00
## PC151 0.000000e+00 0.000000e+00
## PC157 0.000000e+00 0.000000e+00
## PC158 0.000000e+00 0.000000e+00
## PC160 0.000000e+00 0.000000e+00
## PC173 0.000000e+00 0.000000e+00
## PC175 0.000000e+00 0.000000e+00
## PC179 0.000000e+00 0.000000e+00## Warning in glb_analytics_diag_plots(obs_df = glbObsOOB, mdl_id =
## glbMdlSelId, : Limiting important feature scatter plots to 5 out of 180
## Loading required package: lazyeval
## [1] "Min/Max Boundaries: "
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 1 1930 R R
## 2 2193 D D
## 3 4842 R R
## 4 6364 R R
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1 0.7914409
## 2 0.4049701
## 3 0.7070872
## 4 0.9278067
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 1 0.20855915
## 2 0.40497006
## 3 0.29291280
## 4 0.07219328
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 1 0.6337565
## 2 0.4153054
## 3 0.5785823
## 4 0.6790098
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 1 0.3662435
## 2 0.4153054
## 3 0.4214177
## 4 0.3209902
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 1 0.7441043
## 2 0.3856901
## 3 0.5637812
## 4 0.7516256
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 1 0.2558957
## 2 0.3856901
## 3 0.4362188
## 4 0.2483744
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 1 0.7440383
## 2 0.3857384
## 3 0.5637644
## 4 0.7515465
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 1 0.2559617
## 2 0.3857384
## 3 0.4362356
## 4 0.2484535
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 1 R 0.7441853
## 2 D 0.3849327
## 3 R 0.5633098
## 4 R 0.7518776
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 1 TRUE FALSE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 1 0.7441853
## 2 0.3849327
## 3 0.5633098
## 4 0.7518776
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 1 R 0.7441853
## 2 D 0.3849327
## 3 R 0.5633098
## 4 R 0.7518776
## Party.fctr.All.X.zv.rcv.glmnet.is.acc Party.fctr.All.X.zv.rcv.glmnet.err
## 1 TRUE FALSE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.center.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.center.rcv.glmnet.prob
## 1 0.7441853
## 2 0.3849327
## 3 0.5633098
## 4 0.7518776
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.scale.rcv.glmnet Party.fctr.All.X.scale.rcv.glmnet.prob
## 1 R 0.7441853
## 2 D 0.3849327
## 3 R 0.5633098
## 4 R 0.7518776
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.center.scale.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 1 0.7441853
## 2 0.3849327
## 3 0.5633098
## 4 0.7518776
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 1 0.7441853
## 2 0.3849327
## 3 0.5633098
## 4 0.7518776
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 1 0.2558147
## 2 0.3849327
## 3 0.4366902
## 4 0.2481224
## Party.fctr.All.X.range.rcv.glmnet Party.fctr.All.X.range.rcv.glmnet.prob
## 1 R 0.7441853
## 2 D 0.3849327
## 3 R 0.5633098
## 4 R 0.7518776
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 1 0.2558147 R
## 2 0.3849327 R
## 3 0.4366902 R
## 4 0.2481224 R
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 1 0.7500198 TRUE
## 2 0.5000888 FALSE
## 3 0.5808981 TRUE
## 4 0.8740549 TRUE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 1 FALSE 0.2499802
## 2 TRUE 0.5000888
## 3 FALSE 0.4191019
## 4 FALSE 0.1259451
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 1 R 0.7833399
## 2 R 0.7831569
## 3 R 0.7833399
## 4 R 0.7833399
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 1 TRUE FALSE
## 2 FALSE TRUE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 1 0.2166601 R
## 2 0.7831569 D
## 3 0.2166601 R
## 4 0.2166601 R
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 1 0.9309095 TRUE
## 2 0.3873062 TRUE
## 3 0.6703027 TRUE
## 4 0.8552319 TRUE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 1 FALSE 0.06909054
## 2 FALSE 0.38730621
## 3 FALSE 0.32969729
## 4 FALSE 0.14476815
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 1 R 0.8765559
## 2 D 0.3508745
## 3 R 0.7774419
## 4 R 0.9837228
## Party.fctr.All.X..rcv.bayesglm.is.acc Party.fctr.All.X..rcv.bayesglm.err
## 1 TRUE FALSE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 1 0.12344407 R
## 2 0.35087451 D
## 3 0.22255810 R
## 4 0.01627723 R
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 1 0.8825518 TRUE
## 2 0.3513874 TRUE
## 3 0.7884155 TRUE
## 4 0.9852696 TRUE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 1 FALSE 0.11744817
## 2 FALSE 0.35138744
## 3 FALSE 0.21158446
## 4 FALSE 0.01473044
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 1 R 0.7954651
## 2 D 0.4537606
## 3 R 0.6967508
## 4 R 0.9215610
## Party.fctr.All.X..rcv.bagEarth.is.acc Party.fctr.All.X..rcv.bagEarth.err
## 1 TRUE FALSE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 1 0.20453489 R
## 2 0.45376058 D
## 3 0.30324917 R
## 4 0.07843899 R
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 1 0.7423360
## 2 0.3806847
## 3 0.5620644
## 4 0.7519297
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 1 0.2576640 R
## 2 0.3806847 D
## 3 0.4379356 R
## 4 0.2480703 R
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 1 0.570 TRUE
## 2 0.464 TRUE
## 3 0.550 TRUE
## 4 0.664 TRUE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 1 FALSE 0.430
## 2 FALSE 0.464
## 3 FALSE 0.450
## 4 FALSE 0.336
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 1 R 0.9823944
## 2 R 0.5542581
## 3 R 0.5637287
## 4 R 0.9901458
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 1 TRUE FALSE
## 2 FALSE TRUE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 1 0.017605635 R
## 2 0.554258113 D
## 3 0.436271270 R
## 4 0.009854211 R
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 1 0.7374728
## 2 0.3704867
## 3 0.5601193
## 4 0.7489604
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 1 0.2625272 R
## 2 0.3704867 D
## 3 0.4398807 R
## 4 0.2510396 R
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 1 0.8068305 TRUE
## 2 0.3386699 TRUE
## 3 0.5785178 TRUE
## 4 0.8068305 TRUE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 1 FALSE 0.1931695
## 2 FALSE 0.3386699
## 3 FALSE 0.4214822
## 4 FALSE 0.1931695
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 1 R
## 2 D
## 3 D
## 4 R
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 1 0.5528980
## 2 0.3718278
## 3 0.4173116
## 4 0.5667831
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 1 0.4471020
## 2 0.3718278
## 3 0.5826884
## 4 0.4332169
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 1 R
## 2 D
## 3 R
## 4 R
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 1 0.6235856
## 2 0.3967551
## 3 0.5263820
## 4 0.6728866
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 1 0.3764144
## 2 0.3967551
## 3 0.4736180
## 4 0.3271134
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 1 R 0.6225490
## 2 D 0.2330827
## 3 R 0.6225490
## 4 R 0.6225490
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 1 TRUE FALSE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.rpart.err.abs
## 1 0.3774510
## 2 0.2330827
## 3 0.3774510
## 4 0.3774510
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 1 0.5122987
## 2 0.3479286
## 3 0.4206517
## 4 0.5122987
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 1 0.4877013
## 2 0.3479286
## 3 0.5793483
## 4 0.4877013
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 1 R 0.5212650
## 2 D 0.3000000
## 3 D 0.4231928
## 4 R 0.5212650
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 1 TRUE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 1 FALSE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs Party.fctr.All.X.ica.rcv.glmnet
## 1 0.4787350 D
## 2 0.3000000 D
## 3 0.5768072 D
## 4 0.4787350 R
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 1 0.4593517
## 2 0.4457785
## 3 0.4573875
## 4 0.5018623
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 1 0.5406483
## 2 0.4457785
## 3 0.5426125
## 4 0.4981377
## Party.fctr.All.X.zv.pca.rcv.glmnet.accurate
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.error .label
## 1 0 1930
## 2 0 2193
## 3 0 4842
## 4 0 6364
## [1] "Inaccurate: "
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 1 1264 R D
## 2 2425 R D
## 3 2598 R D
## 4 1792 R D
## 5 3075 R D
## 6 5135 R D
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1 0.03778821
## 2 0.18290336
## 3 0.19627590
## 4 0.20704953
## 5 0.21508124
## 6 0.23118250
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 1 0.9622118
## 2 0.8170966
## 3 0.8037241
## 4 0.7929505
## 5 0.7849188
## 6 0.7688175
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 1 0.2243570
## 2 0.3291627
## 3 0.3659195
## 4 0.3926747
## 5 0.4268439
## 6 0.4034658
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 1 0.7756430
## 2 0.6708373
## 3 0.6340805
## 4 0.6073253
## 5 0.5731561
## 6 0.5965342
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 1 0.2109323
## 2 0.4178371
## 3 0.2606008
## 4 0.2949764
## 5 0.4559329
## 6 0.3159621
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 1 0.7890677
## 2 0.5821629
## 3 0.7393992
## 4 0.7050236
## 5 0.5440671
## 6 0.6840379
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 1 0.2109067
## 2 0.4176702
## 3 0.2605618
## 4 0.2950351
## 5 0.4559066
## 6 0.3159338
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 1 0.7890933
## 2 0.5823298
## 3 0.7394382
## 4 0.7049649
## 5 0.5440934
## 6 0.6840662
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 1 D 0.2112086
## 2 D 0.4171643
## 3 D 0.2612503
## 4 D 0.2946746
## 5 R 0.4565205
## 6 D 0.3160730
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 TRUE FALSE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 1 0.2112086
## 2 0.4171643
## 3 0.2612503
## 4 0.2946746
## 5 0.4565205
## 6 0.3160730
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 1 D 0.2112086
## 2 D 0.4171643
## 3 D 0.2612503
## 4 D 0.2946746
## 5 R 0.4565205
## 6 D 0.3160730
## Party.fctr.All.X.zv.rcv.glmnet.is.acc Party.fctr.All.X.zv.rcv.glmnet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 TRUE FALSE
## 6 FALSE TRUE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.center.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.All.X.center.rcv.glmnet.prob
## 1 0.2112086
## 2 0.4171643
## 3 0.2612503
## 4 0.2946746
## 5 0.4565205
## 6 0.3160730
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.scale.rcv.glmnet Party.fctr.All.X.scale.rcv.glmnet.prob
## 1 D 0.2112086
## 2 D 0.4171643
## 3 D 0.2612503
## 4 D 0.2946746
## 5 R 0.4565205
## 6 D 0.3160730
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.center.scale.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 1 0.2112086
## 2 0.4171643
## 3 0.2612503
## 4 0.2946746
## 5 0.4565205
## 6 0.3160730
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 1 0.2112086
## 2 0.4171643
## 3 0.2612503
## 4 0.2946746
## 5 0.4565205
## 6 0.3160730
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 1 0.7887914
## 2 0.5828357
## 3 0.7387497
## 4 0.7053254
## 5 0.5434795
## 6 0.6839270
## Party.fctr.All.X.range.rcv.glmnet Party.fctr.All.X.range.rcv.glmnet.prob
## 1 D 0.2112086
## 2 D 0.4171643
## 3 D 0.2612503
## 4 D 0.2946746
## 5 R 0.4565205
## 6 D 0.3160730
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 1 0.7887914 D
## 2 0.5828357 D
## 3 0.7387497 D
## 4 0.7053254 D
## 5 0.5434795 D
## 6 0.6839270 D
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 1 0.08076739 FALSE
## 2 0.45532679 FALSE
## 3 0.20898001 FALSE
## 4 0.13013300 FALSE
## 5 0.26090271 FALSE
## 6 0.22351355 FALSE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 1 TRUE 0.9192326
## 2 TRUE 0.5446732
## 3 TRUE 0.7910200
## 4 TRUE 0.8698670
## 5 TRUE 0.7390973
## 6 TRUE 0.7764865
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 1 D 0.1444532
## 2 D 0.1444532
## 3 D 0.1444579
## 4 D 0.1444532
## 5 D 0.1444532
## 6 D 0.1444532
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 1 0.8555468 D
## 2 0.8555468 D
## 3 0.8555421 D
## 4 0.8555468 D
## 5 0.8555468 R
## 6 0.8555468 D
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 1 0.04308791 FALSE
## 2 0.45344312 FALSE
## 3 0.22104390 FALSE
## 4 0.13143985 FALSE
## 5 0.56145625 TRUE
## 6 0.22175165 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 1 TRUE 0.9569121
## 2 TRUE 0.5465569
## 3 TRUE 0.7789561
## 4 TRUE 0.8685602
## 5 FALSE 0.4385437
## 6 TRUE 0.7782484
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 1 D 0.00161350
## 2 R 0.48751943
## 3 D 0.08387007
## 4 D 0.07457130
## 5 D 0.19165646
## 6 D 0.12043034
## Party.fctr.All.X..rcv.bayesglm.is.acc Party.fctr.All.X..rcv.bayesglm.err
## 1 FALSE TRUE
## 2 TRUE FALSE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 1 0.9983865 D
## 2 0.5124806 R
## 3 0.9161299 D
## 4 0.9254287 D
## 5 0.8083435 D
## 6 0.8795697 D
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 1 0.001271532 FALSE
## 2 0.510067143 TRUE
## 3 0.080450646 FALSE
## 4 0.067093075 FALSE
## 5 0.205301849 FALSE
## 6 0.120823990 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 1 TRUE 0.9987285
## 2 FALSE 0.4899329
## 3 TRUE 0.9195494
## 4 TRUE 0.9329069
## 5 TRUE 0.7946982
## 6 TRUE 0.8791760
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 1 D 0.02797337
## 2 D 0.34227459
## 3 D 0.14521021
## 4 D 0.15365525
## 5 D 0.35316477
## 6 D 0.14529882
## Party.fctr.All.X..rcv.bagEarth.is.acc Party.fctr.All.X..rcv.bagEarth.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 1 0.9720266 D
## 2 0.6577254 D
## 3 0.8547898 D
## 4 0.8463447 D
## 5 0.6468352 D
## 6 0.8547012 D
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 1 0.2244944
## 2 0.4155892
## 3 0.2553022
## 4 0.3173852
## 5 0.4496689
## 6 0.3088578
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 1 0.7755056 D
## 2 0.5844108 D
## 3 0.7446978 D
## 4 0.6826148 D
## 5 0.5503311 D
## 6 0.6911422 D
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 1 0.336 FALSE
## 2 0.462 FALSE
## 3 0.266 FALSE
## 4 0.350 FALSE
## 5 0.516 FALSE
## 6 0.356 FALSE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 1 TRUE 0.664
## 2 TRUE 0.538
## 3 TRUE 0.734
## 4 TRUE 0.650
## 5 TRUE 0.484
## 6 TRUE 0.644
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 1 D 0.08222648
## 2 D 0.38341447
## 3 D 0.16135415
## 4 D 0.35362190
## 5 R 0.57005964
## 6 D 0.04079462
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 TRUE FALSE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 1 0.9177735 D
## 2 0.6165855 D
## 3 0.8386458 D
## 4 0.6463781 D
## 5 0.4299404 R
## 6 0.9592054 D
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 1 0.2260633
## 2 0.4104362
## 3 0.2636520
## 4 0.2988611
## 5 0.4599529
## 6 0.3419146
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 1 0.7739367 D
## 2 0.5895638 R
## 3 0.7363480 D
## 4 0.7011389 D
## 5 0.5400471 R
## 6 0.6580854 D
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 1 0.2761808 FALSE
## 2 0.4678495 TRUE
## 3 0.1919553 FALSE
## 4 0.2989232 FALSE
## 5 0.4616245 TRUE
## 6 0.2686179 FALSE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 1 TRUE 0.7238192
## 2 FALSE 0.5321505
## 3 TRUE 0.8080447
## 4 TRUE 0.7010768
## 5 FALSE 0.5383755
## 6 TRUE 0.7313821
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 1 D
## 2 R
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 1 0.1562647
## 2 0.5101452
## 3 0.2926265
## 4 0.4683587
## 5 0.4007987
## 6 0.2650570
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 1 0.8437353
## 2 0.4898548
## 3 0.7073735
## 4 0.5316413
## 5 0.5992013
## 6 0.7349430
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 1 0.3087263
## 2 0.4362794
## 3 0.3005692
## 4 0.4164756
## 5 0.4436372
## 6 0.3642021
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 1 0.6912737
## 2 0.5637206
## 3 0.6994308
## 4 0.5835244
## 5 0.5563628
## 6 0.6357979
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 1 D 0.2330827
## 2 D 0.5385802
## 3 D 0.2330827
## 4 D 0.3412322
## 5 R 0.6225490
## 6 D 0.3412322
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 TRUE FALSE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.rpart.err.abs
## 1 0.7669173
## 2 0.4614198
## 3 0.7669173
## 4 0.6587678
## 5 0.3774510
## 6 0.6587678
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 1 D
## 2 R
## 3 D
## 4 R
## 5 D
## 6 D
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 1 0.2694411
## 2 0.5531271
## 3 0.2694411
## 4 0.5531271
## 5 0.4206517
## 6 0.4206517
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## 5 FALSE
## 6 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## 5 TRUE
## 6 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 1 0.7305589
## 2 0.4468729
## 3 0.7305589
## 4 0.4468729
## 5 0.5793483
## 6 0.5793483
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 1 D 0.3000000
## 2 R 0.5212650
## 3 D 0.3000000
## 4 R 0.5212650
## 5 D 0.4231928
## 6 D 0.4231928
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## 5 FALSE
## 6 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## 5 TRUE
## 6 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs Party.fctr.All.X.ica.rcv.glmnet
## 1 0.7000000 D
## 2 0.4787350 D
## 3 0.7000000 D
## 4 0.4787350 D
## 5 0.5768072 D
## 6 0.5768072 D
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 1 0.4533077
## 2 0.4303934
## 3 0.4442853
## 4 0.4378072
## 5 0.4448455
## 6 0.4462038
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 1 0.5466923
## 2 0.5696066
## 3 0.5557147
## 4 0.5621928
## 5 0.5551545
## 6 0.5537962
## Party.fctr.All.X.zv.pca.rcv.glmnet.accurate
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.error
## 1 -0.4122118
## 2 -0.2670966
## 3 -0.2537241
## 4 -0.2429505
## 5 -0.2349188
## 6 -0.2188175
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 7 6088 R D
## 9 2851 R D
## 84 2975 D R
## 94 6624 D R
## 104 6878 D R
## 108 789 D R
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 7 0.2396066
## 9 0.2426496
## 84 0.5001730
## 94 0.5177620
## 104 0.5378576
## 108 0.5470562
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 7 TRUE
## 9 TRUE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 7 0.7603934
## 9 0.7573504
## 84 0.5001730
## 94 0.5177620
## 104 0.5378576
## 108 0.5470562
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 7 D
## 9 D
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 7 0.3541386
## 9 0.4423358
## 84 0.4566774
## 94 0.5033842
## 104 0.4944699
## 108 0.5093538
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 7 TRUE
## 9 TRUE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 7 0.6458614
## 9 0.5576642
## 84 0.4566774
## 94 0.5033842
## 104 0.4944699
## 108 0.5093538
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 7 0.3912631
## 9 0.4677722
## 84 0.5591893
## 94 0.4821667
## 104 0.4711635
## 108 0.5440807
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 7 0.6087369
## 9 0.5322278
## 84 0.5591893
## 94 0.4821667
## 104 0.4711635
## 108 0.5440807
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 7 0.3912911
## 9 0.4677691
## 84 0.5593019
## 94 0.4820232
## 104 0.4710480
## 108 0.5440089
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 7 0.6087089
## 9 0.5322309
## 84 0.5593019
## 94 0.4820232
## 104 0.4710480
## 108 0.5440089
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 7 D 0.3903466
## 9 R 0.4679288
## 84 R 0.5590236
## 94 R 0.4827557
## 104 R 0.4709386
## 108 R 0.5444500
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 7 FALSE TRUE
## 9 TRUE FALSE
## 84 FALSE TRUE
## 94 FALSE TRUE
## 104 FALSE TRUE
## 108 FALSE TRUE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 7 0.3903466
## 9 0.4679288
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 7 D 0.3903466
## 9 R 0.4679288
## 84 R 0.5590236
## 94 R 0.4827557
## 104 R 0.4709386
## 108 R 0.5444500
## Party.fctr.All.X.zv.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.zv.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.center.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.center.rcv.glmnet.prob
## 7 0.3903466
## 9 0.4679288
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.scale.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 7 0.3903466
## 9 0.4679288
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.center.scale.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 7 0.3903466
## 9 0.4679288
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 7 0.3903466
## 9 0.4679288
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 7 0.6096534
## 9 0.5320712
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.range.rcv.glmnet
## 7 D
## 9 R
## 84 R
## 94 R
## 104 R
## 108 R
## Party.fctr.All.X.range.rcv.glmnet.prob
## 7 0.3903466
## 9 0.4679288
## 84 0.5590236
## 94 0.4827557
## 104 0.4709386
## 108 0.5444500
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 7 0.6096534 D
## 9 0.5320712 D
## 84 0.5590236 R
## 94 0.4827557 D
## 104 0.4709386 D
## 108 0.5444500 R
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 7 0.2512227 FALSE
## 9 0.3069208 FALSE
## 84 0.6807916 FALSE
## 94 0.4931859 TRUE
## 104 0.3578731 TRUE
## 108 0.6327232 FALSE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 7 TRUE 0.7487773
## 9 TRUE 0.6930792
## 84 TRUE 0.6807916
## 94 FALSE 0.4931859
## 104 FALSE 0.3578731
## 108 TRUE 0.6327232
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 7 D 0.1444532
## 9 D 0.1444570
## 84 R 0.7833399
## 94 R 0.3907186
## 104 D 0.1444542
## 108 R 0.7767761
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 7 FALSE TRUE
## 9 FALSE TRUE
## 84 FALSE TRUE
## 94 FALSE TRUE
## 104 TRUE FALSE
## 108 FALSE TRUE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 7 0.8555468 D
## 9 0.8555430 D
## 84 0.7833399 R
## 94 0.3907186 D
## 104 0.1444542 D
## 108 0.7767761 R
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 7 0.3897671 FALSE
## 9 0.4497795 FALSE
## 84 0.5719743 FALSE
## 94 0.3601893 TRUE
## 104 0.4940065 TRUE
## 108 0.6736216 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 7 TRUE 0.6102329
## 9 TRUE 0.5502205
## 84 TRUE 0.5719743
## 94 FALSE 0.3601893
## 104 FALSE 0.4940065
## 108 TRUE 0.6736216
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 7 D 0.2212168
## 9 D 0.2792836
## 84 R 0.6387576
## 94 R 0.4625413
## 104 R 0.5249263
## 108 R 0.7622141
## Party.fctr.All.X..rcv.bayesglm.is.acc
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X..rcv.bayesglm.err
## 7 TRUE
## 9 TRUE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 7 0.7787832 D
## 9 0.7207164 D
## 84 0.6387576 R
## 94 0.4625413 R
## 104 0.5249263 R
## 108 0.7622141 R
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 7 0.2268058 FALSE
## 9 0.2739011 FALSE
## 84 0.6431251 FALSE
## 94 0.4600054 FALSE
## 104 0.5144306 FALSE
## 108 0.7708140 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 7 TRUE 0.7731942
## 9 TRUE 0.7260989
## 84 TRUE 0.6431251
## 94 TRUE 0.4600054
## 104 TRUE 0.5144306
## 108 TRUE 0.7708140
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 7 D 0.2829093
## 9 D 0.3282717
## 84 R 0.6052714
## 94 D 0.4361158
## 104 R 0.5782223
## 108 R 0.7378788
## Party.fctr.All.X..rcv.bagEarth.is.acc
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 TRUE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X..rcv.bagEarth.err
## 7 TRUE
## 9 TRUE
## 84 TRUE
## 94 FALSE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 7 0.7170907 D
## 9 0.6717283 R
## 84 0.6052714 R
## 94 0.4361158 R
## 104 0.5782223 R
## 108 0.7378788 R
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 7 0.3886886
## 9 0.4670527
## 84 0.5585453
## 94 0.4836537
## 104 0.4702653
## 108 0.5425073
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 7 0.6113114 D
## 9 0.5329473 D
## 84 0.5585453 R
## 94 0.4836537 D
## 104 0.4702653 D
## 108 0.5425073 D
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 7 0.292 FALSE
## 9 0.412 FALSE
## 84 0.572 FALSE
## 94 0.516 TRUE
## 104 0.464 TRUE
## 108 0.524 TRUE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 7 TRUE 0.708
## 9 TRUE 0.588
## 84 TRUE 0.572
## 94 FALSE 0.516
## 104 FALSE 0.464
## 108 FALSE 0.524
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 7 D 0.2657753
## 9 D 0.5193802
## 84 R 0.7178254
## 94 R 0.5698570
## 104 D 0.4923467
## 108 R 0.8433885
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 7 FALSE TRUE
## 9 FALSE TRUE
## 84 FALSE TRUE
## 94 FALSE TRUE
## 104 TRUE FALSE
## 108 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 7 0.7342247 D
## 9 0.4806198 R
## 84 0.7178254 R
## 94 0.5698570 R
## 104 0.4923467 R
## 108 0.8433885 R
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 7 0.3946910
## 9 0.4752584
## 84 0.5575870
## 94 0.4833976
## 104 0.4701287
## 108 0.5428923
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 7 FALSE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 7 TRUE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 7 0.6053090 D
## 9 0.5247416 R
## 84 0.5575870 R
## 94 0.4833976 R
## 104 0.4701287 R
## 108 0.5428923 R
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 7 0.3223156 FALSE
## 9 0.5182993 TRUE
## 84 0.6178362 FALSE
## 94 0.5262282 FALSE
## 104 0.4531176 FALSE
## 108 0.5458346 FALSE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 7 TRUE 0.6776844
## 9 FALSE 0.4817007
## 84 TRUE 0.6178362
## 94 TRUE 0.5262282
## 104 TRUE 0.4531176
## 108 TRUE 0.5458346
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 7 D
## 9 D
## 84 D
## 94 R
## 104 R
## 108 D
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 7 0.4552124
## 9 0.4552124
## 84 0.3822445
## 94 0.5224378
## 104 0.5224378
## 108 0.4541017
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 7 FALSE
## 9 FALSE
## 84 TRUE
## 94 FALSE
## 104 FALSE
## 108 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 7 TRUE
## 9 TRUE
## 84 FALSE
## 94 TRUE
## 104 TRUE
## 108 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 7 0.5447876
## 9 0.5447876
## 84 0.3822445
## 94 0.5224378
## 104 0.5224378
## 108 0.4541017
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 7 D
## 9 D
## 84 R
## 94 D
## 104 D
## 108 R
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 7 0.4361300
## 9 0.4841563
## 84 0.5476389
## 94 0.4935009
## 104 0.4871757
## 108 0.5102374
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 TRUE
## 104 TRUE
## 108 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 7 TRUE
## 9 TRUE
## 84 TRUE
## 94 FALSE
## 104 FALSE
## 108 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 7 0.5638700
## 9 0.5158437
## 84 0.5476389
## 94 0.4935009
## 104 0.4871757
## 108 0.5102374
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 7 D 0.3412322
## 9 D 0.5385802
## 84 D 0.4269231
## 94 D 0.5385802
## 104 D 0.5385802
## 108 D 0.5385802
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 7 FALSE TRUE
## 9 FALSE TRUE
## 84 TRUE FALSE
## 94 TRUE FALSE
## 104 TRUE FALSE
## 108 TRUE FALSE
## Party.fctr.All.X..rcv.rpart.err.abs
## 7 0.6587678
## 9 0.4614198
## 84 0.4269231
## 94 0.5385802
## 104 0.5385802
## 108 0.5385802
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 7 D
## 9 D
## 84 D
## 94 D
## 104 D
## 108 R
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 7 0.5122987
## 9 0.5122987
## 84 0.4206517
## 94 0.5122987
## 104 0.5122987
## 108 0.5531271
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 7 FALSE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 7 TRUE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 7 0.4877013
## 9 0.4877013
## 84 0.4206517
## 94 0.5122987
## 104 0.5122987
## 108 0.5531271
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 7 R 0.5212650
## 9 R 0.5212650
## 84 D 0.4231928
## 94 R 0.5212650
## 104 R 0.5212650
## 108 R 0.5212650
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 7 TRUE
## 9 TRUE
## 84 TRUE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs
## 7 0.4787350
## 9 0.4787350
## 84 0.4231928
## 94 0.5212650
## 104 0.5212650
## 108 0.5212650
## Party.fctr.All.X.ica.rcv.glmnet Party.fctr.All.X.ica.rcv.glmnet.prob
## 7 D 0.4555972
## 9 D 0.4702853
## 84 D 0.4625168
## 94 D 0.4882280
## 104 D 0.4795006
## 108 D 0.4571805
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 7 FALSE
## 9 FALSE
## 84 TRUE
## 94 TRUE
## 104 TRUE
## 108 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 7 TRUE
## 9 TRUE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 7 0.5444028
## 9 0.5297147
## 84 0.4625168
## 94 0.4882280
## 104 0.4795006
## 108 0.4571805
## Party.fctr.All.X.zv.pca.rcv.glmnet.accurate
## 7 FALSE
## 9 FALSE
## 84 FALSE
## 94 FALSE
## 104 FALSE
## 108 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.error
## 7 -0.21039340
## 9 -0.20735041
## 84 0.05017299
## 94 0.06776198
## 104 0.08785758
## 108 0.09705619
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 164 1228 D R
## 165 5604 D R
## 166 521 D R
## 167 442 D R
## 168 5764 D R
## 169 4361 D R
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 164 0.7678224
## 165 0.7795236
## 166 0.8146192
## 167 0.8265306
## 168 0.8341366
## 169 0.9053814
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 164 0.7678224
## 165 0.7795236
## 166 0.8146192
## 167 0.8265306
## 168 0.8341366
## 169 0.9053814
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 164 0.4993220
## 165 0.6371800
## 166 0.5754180
## 167 0.6346966
## 168 0.6214737
## 169 0.7246530
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 164 0.4993220
## 165 0.6371800
## 166 0.5754180
## 167 0.6346966
## 168 0.6214737
## 169 0.7246530
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 164 0.5290810
## 165 0.5169889
## 166 0.6466234
## 167 0.4892917
## 168 0.6813126
## 169 0.6860480
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 164 0.5290810
## 165 0.5169889
## 166 0.6466234
## 167 0.4892917
## 168 0.6813126
## 169 0.6860480
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 164 0.5292459
## 165 0.5170951
## 166 0.6465471
## 167 0.4893037
## 168 0.6813266
## 169 0.6861798
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 164 0.5292459
## 165 0.5170951
## 166 0.6465471
## 167 0.4893037
## 168 0.6813266
## 169 0.6861798
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 164 R 0.5291337
## 165 R 0.5157447
## 166 R 0.6466044
## 167 R 0.4884292
## 168 R 0.6818120
## 169 R 0.6854357
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 164 FALSE TRUE
## 165 FALSE TRUE
## 166 FALSE TRUE
## 167 FALSE TRUE
## 168 FALSE TRUE
## 169 FALSE TRUE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 164 R 0.5291337
## 165 R 0.5157447
## 166 R 0.6466044
## 167 R 0.4884292
## 168 R 0.6818120
## 169 R 0.6854357
## Party.fctr.All.X.zv.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.zv.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.center.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.center.rcv.glmnet.prob
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.scale.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.center.scale.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.range.rcv.glmnet
## 164 R
## 165 R
## 166 R
## 167 R
## 168 R
## 169 R
## Party.fctr.All.X.range.rcv.glmnet.prob
## 164 0.5291337
## 165 0.5157447
## 166 0.6466044
## 167 0.4884292
## 168 0.6818120
## 169 0.6854357
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 164 0.5291337 R
## 165 0.5157447 R
## 166 0.6466044 R
## 167 0.4884292 R
## 168 0.6818120 R
## 169 0.6854357 R
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 164 0.6395130 FALSE
## 165 0.5894726 FALSE
## 166 0.5860767 FALSE
## 167 0.5386394 FALSE
## 168 0.5220881 FALSE
## 169 0.6500572 FALSE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 164 TRUE 0.6395130
## 165 TRUE 0.5894726
## 166 TRUE 0.5860767
## 167 TRUE 0.5386394
## 168 TRUE 0.5220881
## 169 TRUE 0.6500572
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 164 R 0.7833399
## 165 R 0.7833399
## 166 R 0.7833395
## 167 R 0.7821619
## 168 R 0.7833399
## 169 R 0.7833399
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 164 FALSE TRUE
## 165 FALSE TRUE
## 166 FALSE TRUE
## 167 FALSE TRUE
## 168 FALSE TRUE
## 169 FALSE TRUE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 164 0.7833399 R
## 165 0.7833399 D
## 166 0.7833395 R
## 167 0.7821619 R
## 168 0.7833399 R
## 169 0.7833399 R
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 164 0.6782365 FALSE
## 165 0.2194344 TRUE
## 166 0.8102143 FALSE
## 167 0.6096548 FALSE
## 168 0.8668159 FALSE
## 169 0.7462187 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 164 TRUE 0.6782365
## 165 FALSE 0.2194344
## 166 TRUE 0.8102143
## 167 TRUE 0.6096548
## 168 TRUE 0.8668159
## 169 TRUE 0.7462187
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 164 R 0.9533973
## 165 R 0.7787490
## 166 R 0.9345485
## 167 R 0.8563059
## 168 R 0.9725751
## 169 R 0.8282327
## Party.fctr.All.X..rcv.bayesglm.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X..rcv.bayesglm.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 164 0.9533973 R
## 165 0.7787490 R
## 166 0.9345485 R
## 167 0.8563059 R
## 168 0.9725751 R
## 169 0.8282327 R
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 164 0.9609734 FALSE
## 165 0.7837619 FALSE
## 166 0.9385226 FALSE
## 167 0.8725010 FALSE
## 168 0.9760882 FALSE
## 169 0.8168588 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 164 TRUE 0.9609734
## 165 TRUE 0.7837619
## 166 TRUE 0.9385226
## 167 TRUE 0.8725010
## 168 TRUE 0.9760882
## 169 TRUE 0.8168588
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 164 R 0.7918284
## 165 D 0.4952871
## 166 R 0.8840314
## 167 R 0.7778852
## 168 R 0.8983007
## 169 R 0.7143307
## Party.fctr.All.X..rcv.bagEarth.is.acc
## 164 FALSE
## 165 TRUE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X..rcv.bagEarth.err
## 164 TRUE
## 165 FALSE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 164 0.7918284 R
## 165 0.4952871 R
## 166 0.8840314 R
## 167 0.7778852 R
## 168 0.8983007 R
## 169 0.7143307 R
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 164 0.5272872
## 165 0.5413561
## 166 0.6410476
## 167 0.4908711
## 168 0.6811904
## 169 0.6841193
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 164 0.5272872 D
## 165 0.5413561 R
## 166 0.6410476 R
## 167 0.4908711 D
## 168 0.6811904 D
## 169 0.6841193 R
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 164 0.542 TRUE
## 165 0.576 FALSE
## 166 0.558 FALSE
## 167 0.534 TRUE
## 168 0.534 TRUE
## 169 0.646 FALSE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 164 FALSE 0.542
## 165 TRUE 0.576
## 166 TRUE 0.558
## 167 FALSE 0.534
## 168 FALSE 0.534
## 169 TRUE 0.646
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 164 R 0.8138027
## 165 R 0.7978068
## 166 R 0.8733543
## 167 R 0.6865139
## 168 R 0.5703041
## 169 R 0.7536152
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 164 FALSE TRUE
## 165 FALSE TRUE
## 166 FALSE TRUE
## 167 FALSE TRUE
## 168 FALSE TRUE
## 169 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 164 0.8138027 R
## 165 0.7978068 R
## 166 0.8733543 R
## 167 0.6865139 R
## 168 0.5703041 R
## 169 0.7536152 R
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 164 0.5290488
## 165 0.5363182
## 166 0.6337145
## 167 0.4969215
## 168 0.6860919
## 169 0.7062437
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 164 0.5290488 R
## 165 0.5363182 R
## 166 0.6337145 R
## 167 0.4969215 D
## 168 0.6860919 R
## 169 0.7062437 R
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 164 0.6466448 FALSE
## 165 0.6870107 FALSE
## 166 0.6256010 FALSE
## 167 0.3944287 TRUE
## 168 0.6718509 FALSE
## 169 0.7874528 FALSE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 164 TRUE 0.6466448
## 165 TRUE 0.6870107
## 166 TRUE 0.6256010
## 167 FALSE 0.3944287
## 168 TRUE 0.6718509
## 169 TRUE 0.7874528
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 164 D
## 165 R
## 166 R
## 167 D
## 168 D
## 169 R
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 164 0.3472782
## 165 0.5532471
## 166 0.5570163
## 167 0.3474860
## 168 0.4459434
## 169 0.5249303
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 164 TRUE
## 165 FALSE
## 166 FALSE
## 167 TRUE
## 168 TRUE
## 169 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 164 FALSE
## 165 TRUE
## 166 TRUE
## 167 FALSE
## 168 FALSE
## 169 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 164 0.3472782
## 165 0.5532471
## 166 0.5570163
## 167 0.3474860
## 168 0.4459434
## 169 0.5249303
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 164 R
## 165 D
## 166 R
## 167 D
## 168 R
## 169 R
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 164 0.5018674
## 165 0.4729820
## 166 0.5543791
## 167 0.4571849
## 168 0.5932020
## 169 0.6301253
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 164 FALSE
## 165 TRUE
## 166 FALSE
## 167 TRUE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 164 TRUE
## 165 FALSE
## 166 TRUE
## 167 FALSE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 164 0.5018674
## 165 0.4729820
## 166 0.5543791
## 167 0.4571849
## 168 0.5932020
## 169 0.6301253
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 164 D 0.2330827
## 165 R 0.6225490
## 166 R 0.6225490
## 167 D 0.4269231
## 168 R 0.6225490
## 169 R 0.6225490
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 164 TRUE FALSE
## 165 FALSE TRUE
## 166 FALSE TRUE
## 167 TRUE FALSE
## 168 FALSE TRUE
## 169 FALSE TRUE
## Party.fctr.All.X..rcv.rpart.err.abs
## 164 0.2330827
## 165 0.6225490
## 166 0.6225490
## 167 0.4269231
## 168 0.6225490
## 169 0.6225490
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 164 D
## 165 R
## 166 D
## 167 D
## 168 D
## 169 R
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 164 0.3479286
## 165 0.5531271
## 166 0.4610815
## 167 0.4206517
## 168 0.4610815
## 169 0.5531271
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 164 TRUE
## 165 FALSE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 164 FALSE
## 165 TRUE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 164 0.3479286
## 165 0.5531271
## 166 0.4610815
## 167 0.4206517
## 168 0.4610815
## 169 0.5531271
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 164 D 0.3000000
## 165 R 0.5212650
## 166 D 0.4231928
## 167 D 0.4231928
## 168 D 0.4231928
## 169 R 0.5212650
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 164 TRUE
## 165 FALSE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 164 FALSE
## 165 TRUE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs
## 164 0.3000000
## 165 0.5212650
## 166 0.4231928
## 167 0.4231928
## 168 0.4231928
## 169 0.5212650
## Party.fctr.All.X.ica.rcv.glmnet Party.fctr.All.X.ica.rcv.glmnet.prob
## 164 D 0.4460768
## 165 D 0.4407212
## 166 D 0.4507304
## 167 D 0.4481071
## 168 D 0.4492702
## 169 D 0.4612744
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 164 TRUE
## 165 TRUE
## 166 TRUE
## 167 TRUE
## 168 TRUE
## 169 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 164 0.4460768
## 165 0.4407212
## 166 0.4507304
## 167 0.4481071
## 168 0.4492702
## 169 0.4612744
## Party.fctr.All.X.zv.pca.rcv.glmnet.accurate
## 164 FALSE
## 165 FALSE
## 166 FALSE
## 167 FALSE
## 168 FALSE
## 169 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.error
## 164 0.3178224
## 165 0.3295236
## 166 0.3646192
## 167 0.3765306
## 168 0.3841366
## 169 0.4553814
## Hhold.fctr .n.OOB .n.Fit .n.Tst .freqRatio.Fit .freqRatio.OOB
## PKy PKy 2 28 2 0.01608271 0.004514673
## N N 48 209 59 0.12004595 0.108352144
## MKn MKn 40 188 49 0.10798392 0.090293454
## SKn SKn 222 781 276 0.44859276 0.501128668
## PKn PKn 11 56 12 0.03216542 0.024830700
## SKy SKy 23 47 28 0.02699598 0.051918736
## MKy MKy 97 432 121 0.24813326 0.218961625
## .freqRatio.Tst err.abs.fit.sum err.abs.fit.mean .n.fit err.abs.OOB.sum
## PKy 0.003656307 11.86102 0.4236078 28 1.086637
## N 0.107861060 92.23300 0.4413062 209 24.689085
## MKn 0.089579525 80.88852 0.4302581 188 19.089443
## SKn 0.504570384 340.18513 0.4355763 781 103.541909
## PKn 0.021937843 23.02028 0.4110764 56 4.839375
## SKy 0.051188300 19.44426 0.4137076 47 9.778182
## MKy 0.221206581 190.10070 0.4400479 432 40.247267
## err.abs.OOB.mean
## PKy 0.5433185
## N 0.5143559
## MKn 0.4772361
## SKn 0.4664050
## PKn 0.4399432
## SKy 0.4251384
## MKy 0.4149203
## .n.OOB .n.Fit .n.Tst .freqRatio.Fit
## 443.000000 1741.000000 547.000000 1.000000
## .freqRatio.OOB .freqRatio.Tst err.abs.fit.sum err.abs.fit.mean
## 1.000000 1.000000 757.732903 2.995580
## .n.fit err.abs.OOB.sum err.abs.OOB.mean
## 1741.000000 203.271898 3.281317## label step_major step_minor label_minor bgn end elapsed
## 1 fit.models_2_bgn 1 0 teardown 436.293 NA NA## label step_major step_minor label_minor bgn end elapsed
## 1 fit.models_2 1 0 0 9.814 436.304 426.49
## 2 fit.models 1 1 1 436.304 NA NA# if (sum(is.na(glbObsAll$D.P.http)) > 0)
# stop("fit.models_3: Why is this happening ?")
#stop(here"); glb2Sav()
sync_glb_obs_df <- function() {
# Merge or cbind ?
for (col in setdiff(names(glbObsFit), names(glbObsTrn)))
glbObsTrn[glbObsTrn$.lcn == "Fit", col] <<- glbObsFit[, col]
for (col in setdiff(names(glbObsFit), names(glbObsAll)))
glbObsAll[glbObsAll$.lcn == "Fit", col] <<- glbObsFit[, col]
if (all(is.na(glbObsNew[, glb_rsp_var])))
for (col in setdiff(names(glbObsOOB), names(glbObsTrn)))
glbObsTrn[glbObsTrn$.lcn == "OOB", col] <<- glbObsOOB[, col]
for (col in setdiff(names(glbObsOOB), names(glbObsAll)))
glbObsAll[glbObsAll$.lcn == "OOB", col] <<- glbObsOOB[, col]
}
sync_glb_obs_df()
print(setdiff(names(glbObsNew), names(glbObsAll)))## character(0)replay.petrisim(pn = glb_analytics_pn,
replay.trans = (glb_analytics_avl_objs <- c(glb_analytics_avl_objs,
"model.selected")), flip_coord = TRUE)## time trans "bgn " "fit.data.training.all " "predict.data.new " "end "
## 0.0000 multiple enabled transitions: data.training.all data.new model.selected firing: model.selected
## 1.0000 3 2 1 0 0
glb_chunks_df <- myadd_chunk(glb_chunks_df, "fit.data.training", major.inc = TRUE)## label step_major step_minor label_minor bgn end
## 2 fit.models 1 1 1 436.304 473.075
## 3 fit.data.training 2 0 0 473.076 NA
## elapsed
## 2 36.771
## 3 NAStep 2.0: fit data training
```{r fit.data.training_0, cache=FALSE, eval=myevlChunk(glbChunks, glbOut$pfx)}
## [1] "myfit_mdl: enter: 0.000000 secs"
## [1] "myfit_mdl: fitting model: Final.All.X#zv.pca##glmnet"
## [1] " indepVar: Gender.fctr,Q113181.fctr,Q120472.fctr,Q115611.fctr,Q120650.fctr,Q118237.fctr,.rnorm,Q122120.fctr,Q110740.fctr,Q122770.fctr,Q118117.fctr,Income.fctr,Q116441.fctr,Q118233.fctr,Q106272.fctr,Q119650.fctr,Q124742.fctr,Q122771.fctr,Q99480.fctr,Q116197.fctr,Q116881.fctr,Q101596.fctr,Q122769.fctr,Q108855.fctr,Q120014.fctr,Q119334.fctr,Q106993.fctr,Q107869.fctr,Q121011.fctr,Q117186.fctr,Q106997.fctr,Q108617.fctr,Q98197.fctr,Q106042.fctr,Q115777.fctr,Q123621.fctr,Q106388.fctr,Q114152.fctr,Q124122.fctr,Q120194.fctr,Q116797.fctr,Q105655.fctr,Q115899.fctr,Q116448.fctr,Q117193.fctr,Q108754.fctr,Q108856.fctr,YOB.Age.fctr,Q123464.fctr,Q99581.fctr,Q114961.fctr,Q104996.fctr,Q108343.fctr,Q120012.fctr,Q120978.fctr,Q98578.fctr,Q103293.fctr,Q106389.fctr,Q98869.fctr,Q112512.fctr,Q116953.fctr,Q100010.fctr,Q111220.fctr,Q102906.fctr,Q121700.fctr,Q112478.fctr,Q115610.fctr,Q119851.fctr,Q114517.fctr,Q118892.fctr,Q115602.fctr,Q120379.fctr,Q107491.fctr,Q114748.fctr,Q99982.fctr,Q113992.fctr,Q115390.fctr,Q118232.fctr,Q96024.fctr,Q115195.fctr,Q121699.fctr,Q100680.fctr,Q111580.fctr,Q102289.fctr,Q102687.fctr,Q105840.fctr,Q101162.fctr,Q108950.fctr,Q116601.fctr,Q108342.fctr,Q100562.fctr,Q113584.fctr,Q109367.fctr,Q99716.fctr,Hhold.fctr,Q112270.fctr,Q98059.fctr,Q111848.fctr,Q102674.fctr,Q114386.fctr,Q98078.fctr,Q102089.fctr,Edn.fctr,Q100689.fctr,Q113583.fctr,Q101163.fctr,YOB.Age.fctr:YOB.Age.dff,Hhold.fctr:.clusterid.fctr"
## [1] "myfit_mdl: setup complete: 0.686000 secs"
## Fitting alpha = 1, lambda = 0.00483 on full training set
## [1] "myfit_mdl: train complete: 2.898000 secs"
## alpha lambda
## 1 1 0.004831424
## Length Class Mode
## a0 58 -none- numeric
## beta 10556 dgCMatrix S4
## df 58 -none- numeric
## dim 2 -none- numeric
## lambda 58 -none- numeric
## dev.ratio 58 -none- numeric
## nulldev 1 -none- numeric
## npasses 1 -none- numeric
## jerr 1 -none- numeric
## offset 1 -none- logical
## classnames 2 -none- character
## call 5 -none- call
## nobs 1 -none- numeric
## lambdaOpt 1 -none- numeric
## xNames 182 -none- character
## problemType 1 -none- character
## tuneValue 2 data.frame list
## obsLevels 2 -none- character
## [1] "min lambda > lambdaOpt:"
## (Intercept) PC1 PC2 PC3 PC4
## -0.1591266088 0.0056887367 -0.0103859510 0.0035588699 -0.0219267475
## PC5 PC6 PC7 PC8 PC9
## -0.0066849895 -0.0598062508 -0.0482160606 -0.0581889324 0.0448232402
## PC10 PC11 PC12 PC13 PC14
## -0.0350643155 0.0371413810 -0.0854766939 0.0066907174 0.0403796774
## PC16 PC17 PC18 PC19 PC20
## 0.0521072386 0.0709349014 -0.0860161171 0.0073930748 -0.0700097858
## PC21 PC23 PC24 PC25 PC26
## -0.1280665474 0.0197339205 -0.0408908333 -0.0397539461 -0.0971789995
## PC27 PC28 PC29 PC30 PC31
## 0.0732056606 0.1343132343 0.0039898095 -0.0026953742 0.0699219380
## PC32 PC33 PC34 PC35 PC36
## 0.0285825570 0.0221678143 -0.0175990531 0.0117230967 -0.1010646025
## PC37 PC38 PC39 PC40 PC41
## 0.0055146929 -0.0310598357 -0.0017471865 -0.0146229739 0.0393952728
## PC42 PC44 PC46 PC47 PC48
## 0.0022148978 0.0350391346 -0.0501189107 -0.0414029752 -0.0433869219
## PC50 PC51 PC52 PC54 PC56
## -0.0502118164 -0.0266007357 -0.0255610772 -0.0409799652 0.0133343384
## PC57 PC58 PC60 PC62 PC63
## 0.0033708199 0.0194648764 0.0399701966 0.0223046478 -0.0360286866
## PC65 PC66 PC67 PC68 PC71
## -0.0415030568 -0.0581380119 -0.0228599003 -0.0189799969 0.0066387100
## PC72 PC73 PC74 PC75 PC77
## 0.0002887040 -0.0281152726 -0.0274444819 0.0249713611 -0.0552244390
## PC78 PC79 PC82 PC83 PC85
## 0.0415286370 -0.0762107792 0.0118528317 0.0360564237 -0.0649950908
## PC86 PC88 PC89 PC91 PC92
## 0.0239552648 0.0161510247 0.0090843181 -0.0092934852 0.0831083324
## PC95 PC96 PC97 PC99 PC100
## 0.0197281927 0.0186335740 -0.0062904552 -0.0113108262 0.0005774036
## PC101 PC102 PC104 PC105 PC108
## -0.0322857384 0.0058843162 0.0183418917 0.0092537655 0.0081334686
## PC110 PC113 PC114 PC116 PC119
## 0.0205033835 0.0518824161 0.0039290960 0.1123784342 0.0006620032
## PC120 PC121 PC122 PC125 PC126
## 0.1040528950 -0.0511486720 -0.0069931418 0.0995775916 -0.0332400787
## PC127 PC128 PC129 PC130 PC132
## 0.0381761005 -0.0145211308 -0.0136657358 -0.1894323884 -0.0749643789
## PC133 PC134 PC135 PC136 PC137
## 0.0027636073 0.1176847710 -0.0330382805 0.0682541648 0.0304893045
## PC138 PC139 PC140 PC141 PC142
## -0.0032542492 -0.0920532477 0.0515897373 -0.0245345816 0.0496099920
## PC143 PC144 PC145 PC147 PC148
## -0.0870955874 -0.0248681357 -0.0408310464 0.0341540564 -0.0370107885
## PC150 PC152 PC153 PC155 PC156
## 0.0205808999 -0.0445828530 -0.0325605129 -0.0152881787 -0.0330635169
## PC157 PC158 PC160 PC161 PC162
## -0.0071342172 -0.0389545194 -0.0069877206 0.0220684679 0.0246944264
## PC163 PC164 PC166 PC168 PC170
## 0.0301294173 -0.0385349603 0.0928220627 -0.0306418576 0.0873588071
## PC171 PC172 PC174 PC175 PC176
## 0.0229927506 -0.0116091236 0.0046850935 0.0095249805 -0.0735594141
## PC177 PC182
## 0.0380694016 0.0564081066
## [1] "max lambda < lambdaOpt:"
## (Intercept) PC1 PC2 PC3 PC4
## -0.1601657287 0.0062267080 -0.0111243065 0.0044831053 -0.0230088252
## PC5 PC6 PC7 PC8 PC9
## -0.0078158996 -0.0613640259 -0.0497104400 -0.0597637921 0.0462772520
## PC10 PC11 PC12 PC13 PC14
## -0.0366315800 0.0386915099 -0.0872591999 0.0078516352 0.0417232654
## PC16 PC17 PC18 PC19 PC20
## 0.0536405876 0.0727402884 -0.0879746373 0.0089196757 -0.0720616735
## PC21 PC23 PC24 PC25 PC26
## -0.1305844995 0.0215793400 -0.0426342129 -0.0417908271 -0.0997330788
## PC27 PC28 PC29 PC30 PC31
## 0.0750982436 0.1368758440 0.0058364679 -0.0044478594 0.0722709918
## PC32 PC33 PC34 PC35 PC36
## 0.0302922052 0.0238694691 -0.0193954396 0.0134972962 -0.1035510364
## PC37 PC38 PC39 PC40 PC41
## 0.0074226969 -0.0332001975 -0.0037741683 -0.0164075165 0.0412813138
## PC42 PC44 PC46 PC47 PC48
## 0.0043421821 0.0370412255 -0.0526100507 -0.0437860138 -0.0455049975
## PC50 PC51 PC52 PC54 PC56
## -0.0524004773 -0.0287422099 -0.0272509836 -0.0429478023 0.0152053968
## PC57 PC58 PC60 PC62 PC63
## 0.0053090176 0.0218098465 0.0423458740 0.0245692213 -0.0383528942
## PC65 PC66 PC67 PC68 PC71
## -0.0435383065 -0.0604700330 -0.0250187812 -0.0208480528 0.0085293542
## PC72 PC73 PC74 PC75 PC77
## 0.0021734913 -0.0303572964 -0.0298869046 0.0270125555 -0.0576174393
## PC78 PC79 PC82 PC83 PC85
## 0.0439593778 -0.0784856941 0.0141978249 0.0384044311 -0.0676369638
## PC86 PC88 PC89 PC91 PC92
## 0.0260575697 0.0180574867 0.0113303961 -0.0113257837 0.0860658818
## PC95 PC96 PC97 PC99 PC100
## 0.0222330243 0.0208288902 -0.0082615277 -0.0137603494 0.0028891398
## PC101 PC102 PC104 PC105 PC108
## -0.0347639791 0.0080273851 0.0208487961 0.0116826412 0.0101953779
## PC109 PC110 PC113 PC114 PC116
## 0.0019911546 0.0229095528 0.0546154480 0.0060032665 0.1154485083
## PC118 PC119 PC120 PC121 PC122
## 0.0003549896 0.0029647136 0.1070096229 -0.0538174497 -0.0095126023
## PC124 PC125 PC126 PC127 PC128
## 0.0005681740 0.1026587464 -0.0358313075 0.0407584236 -0.0167665288
## PC129 PC130 PC132 PC133 PC134
## -0.0164500659 -0.1930744085 -0.0778911988 0.0051535517 0.1212684291
## PC135 PC136 PC137 PC138 PC139
## -0.0361099291 0.0712382432 0.0330846510 -0.0053210975 -0.0950287253
## PC140 PC141 PC142 PC143 PC144
## 0.0545989916 -0.0270902040 0.0527166158 -0.0906183169 -0.0280278977
## PC145 PC147 PC148 PC150 PC152
## -0.0434974124 0.0371048177 -0.0403003428 0.0231176420 -0.0475514946
## PC153 PC155 PC156 PC157 PC158
## -0.0353295694 -0.0182774707 -0.0356644573 -0.0102308773 -0.0420719006
## PC160 PC161 PC162 PC163 PC164
## -0.0100195202 0.0247051675 0.0276509726 0.0332599437 -0.0416921064
## PC166 PC168 PC170 PC171 PC172
## 0.0968145490 -0.0342355110 0.0912963116 0.0263486700 -0.0152148853
## PC173 PC174 PC175 PC176 PC177
## -0.0009413444 0.0075039326 0.0130041039 -0.0771322356 0.0417479410
## PC178 PC182
## -0.0015044841 0.0609023718
## [1] "myfit_mdl: train diagnostics complete: 2.961000 secs"
## Prediction
## Reference D R
## D 725 446
## R 286 727
## Accuracy Kappa AccuracyLower AccuracyUpper AccuracyNull
## 6.648352e-01 3.332483e-01 6.445978e-01 6.846293e-01 5.361722e-01
## AccuracyPValue McnemarPValue
## 1.940095e-34 4.182500e-09
## [1] "myfit_mdl: predict complete: 8.579000 secs"
## id
## 1 Final.All.X#zv.pca##glmnet
## feats
## 1 Gender.fctr,Q113181.fctr,Q120472.fctr,Q115611.fctr,Q120650.fctr,Q118237.fctr,.rnorm,Q122120.fctr,Q110740.fctr,Q122770.fctr,Q118117.fctr,Income.fctr,Q116441.fctr,Q118233.fctr,Q106272.fctr,Q119650.fctr,Q124742.fctr,Q122771.fctr,Q99480.fctr,Q116197.fctr,Q116881.fctr,Q101596.fctr,Q122769.fctr,Q108855.fctr,Q120014.fctr,Q119334.fctr,Q106993.fctr,Q107869.fctr,Q121011.fctr,Q117186.fctr,Q106997.fctr,Q108617.fctr,Q98197.fctr,Q106042.fctr,Q115777.fctr,Q123621.fctr,Q106388.fctr,Q114152.fctr,Q124122.fctr,Q120194.fctr,Q116797.fctr,Q105655.fctr,Q115899.fctr,Q116448.fctr,Q117193.fctr,Q108754.fctr,Q108856.fctr,YOB.Age.fctr,Q123464.fctr,Q99581.fctr,Q114961.fctr,Q104996.fctr,Q108343.fctr,Q120012.fctr,Q120978.fctr,Q98578.fctr,Q103293.fctr,Q106389.fctr,Q98869.fctr,Q112512.fctr,Q116953.fctr,Q100010.fctr,Q111220.fctr,Q102906.fctr,Q121700.fctr,Q112478.fctr,Q115610.fctr,Q119851.fctr,Q114517.fctr,Q118892.fctr,Q115602.fctr,Q120379.fctr,Q107491.fctr,Q114748.fctr,Q99982.fctr,Q113992.fctr,Q115390.fctr,Q118232.fctr,Q96024.fctr,Q115195.fctr,Q121699.fctr,Q100680.fctr,Q111580.fctr,Q102289.fctr,Q102687.fctr,Q105840.fctr,Q101162.fctr,Q108950.fctr,Q116601.fctr,Q108342.fctr,Q100562.fctr,Q113584.fctr,Q109367.fctr,Q99716.fctr,Hhold.fctr,Q112270.fctr,Q98059.fctr,Q111848.fctr,Q102674.fctr,Q114386.fctr,Q98078.fctr,Q102089.fctr,Edn.fctr,Q100689.fctr,Q113583.fctr,Q101163.fctr,YOB.Age.fctr:YOB.Age.dff,Hhold.fctr:.clusterid.fctr
## max.nTuningRuns min.elapsedtime.everything min.elapsedtime.final
## 1 0 2.118 1.247
## max.AUCpROC.fit max.Sens.fit max.Spec.fit max.AUCROCR.fit
## 1 0.6576892 0.7438087 0.5715696 0.7246184
## opt.prob.threshold.fit max.f.score.fit max.Accuracy.fit
## 1 0.45 0.6651418 0.6648352
## max.AccuracyLower.fit max.AccuracyUpper.fit max.Kappa.fit
## 1 0.6445978 0.6846293 0.3332483
## [1] "myfit_mdl: exit: 8.624000 secs"## label step_major step_minor label_minor bgn end
## 3 fit.data.training 2 0 0 473.076 482.191
## 4 fit.data.training 2 1 1 482.192 NA
## elapsed
## 3 9.115
## 4 NA#stop(here"); glb2Sav()
if (glb_is_classification && glb_is_binomial)
prob_threshold <- glb_models_df[glb_models_df$id == glbMdlSelId,
"opt.prob.threshold.OOB"] else
prob_threshold <- NULL
if (grepl("Ensemble", glbMdlFinId)) {
# Get predictions for each model in ensemble; Outliers that have been moved to OOB might not have been predicted yet
mdlEnsembleComps <- unlist(str_split(subset(glb_models_df,
id == glbMdlFinId)$feats, ","))
if (glb_is_classification)
# mdlEnsembleComps <- gsub("\\.prob$", "", mdlEnsembleComps)
# mdlEnsembleComps <- gsub(paste0("^",
# gsub(".", "\\.", mygetPredictIds(glb_rsp_var)$value, fixed = TRUE)),
# "", mdlEnsembleComps)
mdlEnsembleComps <- glb_models_df$id[sapply(glb_models_df$id, function(thsMdlId)
mygetPredictIds(glb_rsp_var, thsMdlId)$prob %in% mdlEnsembleComps)] else
mdlEnsembleComps <- glb_models_df$id[sapply(glb_models_df$id, function(thsMdlId)
mygetPredictIds(glb_rsp_var, thsMdlId)$value %in% mdlEnsembleComps)]
for (mdl_id in mdlEnsembleComps) {
glbObsTrn <- glb_get_predictions(df = glbObsTrn, mdl_id = mdl_id,
rsp_var = glb_rsp_var,
prob_threshold_def = prob_threshold)
glbObsNew <- glb_get_predictions(df = glbObsNew, mdl_id = mdl_id,
rsp_var = glb_rsp_var,
prob_threshold_def = prob_threshold)
# glb_fin_mdl uses the same coefficients as glb_sel_mdl,
# so copy the "Final" columns into "non-Final" columns
glbObsTrn[, gsub("Final.", "", unlist(mygetPredictIds(glb_rsp_var, mdl_id)))] <-
glbObsTrn[, unlist(mygetPredictIds(glb_rsp_var, mdl_id))]
glbObsNew[, gsub("Final.", "", unlist(mygetPredictIds(glb_rsp_var, mdl_id)))] <-
glbObsNew[, unlist(mygetPredictIds(glb_rsp_var, mdl_id))]
}
}
glbObsTrn <- glb_get_predictions(df = glbObsTrn, mdl_id = glbMdlFinId,
rsp_var = glb_rsp_var,
prob_threshold_def = prob_threshold)## Warning in glb_get_predictions(df = glbObsTrn, mdl_id = glbMdlFinId,
## rsp_var = glb_rsp_var, : Using default probability threshold: 0.45glb_featsimp_df <- myget_feats_importance(mdl=glb_fin_mdl,
featsimp_df=glb_featsimp_df)
#glb_featsimp_df[, paste0(glbMdlFinId, ".imp")] <- glb_featsimp_df$imp
print(glb_featsimp_df)## All.X.zv.pca.rcv.glmnet.imp Final.All.X.zv.pca..glmnet.imp
## PC130 6.950057e+01 100.0000000
## PC28 2.888611e+01 70.8946101
## PC21 4.988859e+01 67.6291473
## PC134 0.000000e+00 62.6873757
## PC116 0.000000e+00 59.7109782
## PC120 2.489996e+01 55.3358766
## PC36 1.345465e+01 53.5826145
## PC125 0.000000e+00 53.0630014
## PC26 2.038367e+01 51.5920368
## PC166 5.488771e+01 49.9400943
## PC139 4.823095e+00 49.1075520
## PC170 7.479393e+01 47.0773911
## PC143 9.275090e+01 46.7640067
## PC18 2.357931e+01 45.5370482
## PC12 8.425935e-03 45.1817693
## PC92 3.818783e+00 44.4511794
## PC79 7.362601e+00 40.5758428
## PC132 1.432095e+01 40.2056225
## PC176 1.000000e+02 39.7504818
## PC27 4.033550e+01 38.8512853
## PC17 4.985385e+01 37.6340316
## PC31 0.000000e+00 37.3390487
## PC20 5.129963e+01 37.2581878
## PC136 2.984962e+01 36.7426511
## PC85 0.000000e+00 34.9031946
## PC6 3.450937e+01 31.7449693
## PC182 NA 31.2291154
## PC66 1.699096e+01 31.2076021
## PC8 3.601150e+01 30.9117104
## PC77 1.028165e+01 29.7193577
## PC113 4.852200e+01 28.1272489
## PC140 0.000000e+00 28.0927410
## PC16 8.520516e+01 27.7333355
## PC121 0.000000e+00 27.7185609
## PC46 0.000000e+00 27.1077584
## PC142 6.509297e-01 27.1053068
## PC50 0.000000e+00 27.0272641
## PC7 2.909991e+01 25.6944700
## PC152 1.613821e+01 24.4339200
## PC9 3.351613e+01 23.9140094
## PC48 1.022987e+01 23.4502639
## PC78 6.978608e+01 22.6176140
## PC47 4.830536e+01 22.5319977
## PC65 0.000000e+00 22.4359425
## PC145 2.367954e+01 22.3553864
## PC54 4.050821e+00 22.1353875
## PC24 2.329016e+01 21.9935040
## PC60 1.935100e+01 21.7842379
## PC158 0.000000e+00 21.5721573
## PC14 4.646959e+01 21.5576443
## PC25 0.000000e+00 21.5276110
## PC164 1.321090e-01 21.3710389
## PC177 4.053201e+00 21.3510636
## PC41 0.000000e+00 21.2769869
## PC127 0.000000e+00 20.9398104
## PC148 1.685374e+01 20.6352870
## PC11 3.376872e+01 19.9626104
## PC83 3.881538e+01 19.7384404
## PC63 6.468828e+00 19.7138926
## PC44 4.445818e+01 19.0624764
## PC147 3.586515e+01 19.0063835
## PC10 3.822141e+01 18.8904392
## PC135 2.697665e+01 18.4779731
## PC126 0.000000e+00 18.3783143
## PC156 2.446547e+01 18.2906884
## PC153 3.481962e+01 18.1008475
## PC101 1.176511e+00 17.8342326
## PC168 3.922960e+01 17.4547735
## PC38 1.838838e+01 17.0532725
## PC163 5.034326e+01 16.9912818
## PC137 3.728419e+01 16.9504693
## PC32 0.000000e+00 15.5824392
## PC73 5.291358e+01 15.5662427
## PC74 3.832925e+01 15.3029459
## PC51 0.000000e+00 14.7363183
## PC144 7.010065e+01 14.2694009
## PC162 3.612958e+00 14.0926054
## PC52 1.524829e+01 14.0037485
## PC75 2.638460e+01 13.8468267
## PC141 1.112507e+01 13.8388427
## PC171 2.531038e+01 13.3782616
## PC86 2.485278e+01 13.3447711
## PC67 0.000000e+00 12.7995887
## PC161 1.062154e+01 12.5917028
## PC62 0.000000e+00 12.5560176
## PC33 6.838701e+01 12.2452460
## PC4 2.088729e+01 11.8561818
## PC150 0.000000e+00 11.7760464
## PC110 6.055558e+01 11.6801702
## PC95 9.695666e+00 11.3193024
## PC58 2.727390e+01 11.1143952
## PC23 6.975107e+00 11.0415398
## PC68 0.000000e+00 10.6593573
## PC96 0.000000e+00 10.6186471
## PC104 0.000000e+00 10.5997138
## PC34 2.985494e+01 9.9111577
## PC155 3.706870e+01 9.2180488
## PC88 1.815422e+00 9.2054702
## PC128 6.982828e+01 8.5027014
## PC40 0.000000e+00 8.3594245
## PC129 0.000000e+00 8.2875922
## PC56 0.000000e+00 7.7265443
## PC172 5.303319e-01 7.5684732
## PC82 0.000000e+00 7.1583681
## PC99 1.130747e+01 6.9211866
## PC35 7.315796e+01 6.8479330
## PC175 0.000000e+00 6.4314132
## PC105 0.000000e+00 5.8433261
## PC2 8.646527e+00 5.7120059
## PC91 3.343727e+01 5.6951291
## PC89 3.230346e+01 5.6774383
## PC108 0.000000e+00 5.1048663
## PC157 0.000000e+00 5.0260847
## PC160 0.000000e+00 4.9223355
## PC122 4.042866e+01 4.7070287
## PC19 5.092883e+00 4.4921748
## PC71 0.000000e+00 4.2551143
## PC97 2.642836e+00 4.1083654
## PC13 3.070796e+01 3.9714677
## PC102 6.930198e+00 3.9705179
## PC5 0.000000e+00 3.9557153
## PC37 7.602710e+00 3.6783449
## PC174 4.419996e+01 3.6349766
## PC1 4.431252e+00 3.1855163
## PC114 1.271674e+00 2.9250423
## PC29 5.254738e+01 2.8597341
## PC57 1.296634e+01 2.5770127
## PC138 4.559336e+01 2.5712020
## PC133 0.000000e+00 2.4537673
## PC3 3.679924e+00 2.2430573
## PC30 1.897980e+01 2.1469129
## PC42 0.000000e+00 2.0567734
## PC39 0.000000e+00 1.7709973
## PC119 5.347449e+00 1.3244086
## PC100 4.532840e+00 1.2842843
## PC72 0.000000e+00 0.9524748
## PC109 2.867807e+00 0.8477182
## PC178 9.244490e+00 0.6405221
## PC173 0.000000e+00 0.4007699
## PC124 3.662386e+01 0.2418955
## PC118 0.000000e+00 0.1511340
## PC103 0.000000e+00 0.0000000
## PC106 4.872059e+01 0.0000000
## PC107 9.153527e-01 0.0000000
## PC111 6.230038e+01 0.0000000
## PC112 1.338934e+01 0.0000000
## PC115 4.921876e+01 0.0000000
## PC117 1.613769e+01 0.0000000
## PC123 5.724446e+01 0.0000000
## PC131 2.388039e+01 0.0000000
## PC146 2.488196e+01 0.0000000
## PC149 0.000000e+00 0.0000000
## PC15 3.401918e+01 0.0000000
## PC151 0.000000e+00 0.0000000
## PC154 2.783634e+01 0.0000000
## PC159 2.441279e+01 0.0000000
## PC165 5.257870e+01 0.0000000
## PC167 1.633314e+01 0.0000000
## PC169 4.175077e+01 0.0000000
## PC179 0.000000e+00 0.0000000
## PC180 2.996555e+01 0.0000000
## PC181 NA 0.0000000
## PC22 0.000000e+00 0.0000000
## PC43 0.000000e+00 0.0000000
## PC45 3.501084e+01 0.0000000
## PC49 8.930977e+00 0.0000000
## PC53 3.961769e+01 0.0000000
## PC55 3.366349e+01 0.0000000
## PC59 1.263362e+01 0.0000000
## PC61 0.000000e+00 0.0000000
## PC64 1.202000e+01 0.0000000
## PC69 1.487455e+01 0.0000000
## PC70 3.815807e+01 0.0000000
## PC76 0.000000e+00 0.0000000
## PC80 0.000000e+00 0.0000000
## PC81 0.000000e+00 0.0000000
## PC84 1.476555e+00 0.0000000
## PC87 3.885272e+01 0.0000000
## PC90 2.319657e+01 0.0000000
## PC93 0.000000e+00 0.0000000
## PC94 2.450185e+01 0.0000000
## PC98 1.638492e+01 0.0000000
## imp
## PC130 100.0000000
## PC28 70.8946101
## PC21 67.6291473
## PC134 62.6873757
## PC116 59.7109782
## PC120 55.3358766
## PC36 53.5826145
## PC125 53.0630014
## PC26 51.5920368
## PC166 49.9400943
## PC139 49.1075520
## PC170 47.0773911
## PC143 46.7640067
## PC18 45.5370482
## PC12 45.1817693
## PC92 44.4511794
## PC79 40.5758428
## PC132 40.2056225
## PC176 39.7504818
## PC27 38.8512853
## PC17 37.6340316
## PC31 37.3390487
## PC20 37.2581878
## PC136 36.7426511
## PC85 34.9031946
## PC6 31.7449693
## PC182 31.2291154
## PC66 31.2076021
## PC8 30.9117104
## PC77 29.7193577
## PC113 28.1272489
## PC140 28.0927410
## PC16 27.7333355
## PC121 27.7185609
## PC46 27.1077584
## PC142 27.1053068
## PC50 27.0272641
## PC7 25.6944700
## PC152 24.4339200
## PC9 23.9140094
## PC48 23.4502639
## PC78 22.6176140
## PC47 22.5319977
## PC65 22.4359425
## PC145 22.3553864
## PC54 22.1353875
## PC24 21.9935040
## PC60 21.7842379
## PC158 21.5721573
## PC14 21.5576443
## PC25 21.5276110
## PC164 21.3710389
## PC177 21.3510636
## PC41 21.2769869
## PC127 20.9398104
## PC148 20.6352870
## PC11 19.9626104
## PC83 19.7384404
## PC63 19.7138926
## PC44 19.0624764
## PC147 19.0063835
## PC10 18.8904392
## PC135 18.4779731
## PC126 18.3783143
## PC156 18.2906884
## PC153 18.1008475
## PC101 17.8342326
## PC168 17.4547735
## PC38 17.0532725
## PC163 16.9912818
## PC137 16.9504693
## PC32 15.5824392
## PC73 15.5662427
## PC74 15.3029459
## PC51 14.7363183
## PC144 14.2694009
## PC162 14.0926054
## PC52 14.0037485
## PC75 13.8468267
## PC141 13.8388427
## PC171 13.3782616
## PC86 13.3447711
## PC67 12.7995887
## PC161 12.5917028
## PC62 12.5560176
## PC33 12.2452460
## PC4 11.8561818
## PC150 11.7760464
## PC110 11.6801702
## PC95 11.3193024
## PC58 11.1143952
## PC23 11.0415398
## PC68 10.6593573
## PC96 10.6186471
## PC104 10.5997138
## PC34 9.9111577
## PC155 9.2180488
## PC88 9.2054702
## PC128 8.5027014
## PC40 8.3594245
## PC129 8.2875922
## PC56 7.7265443
## PC172 7.5684732
## PC82 7.1583681
## PC99 6.9211866
## PC35 6.8479330
## PC175 6.4314132
## PC105 5.8433261
## PC2 5.7120059
## PC91 5.6951291
## PC89 5.6774383
## PC108 5.1048663
## PC157 5.0260847
## PC160 4.9223355
## PC122 4.7070287
## PC19 4.4921748
## PC71 4.2551143
## PC97 4.1083654
## PC13 3.9714677
## PC102 3.9705179
## PC5 3.9557153
## PC37 3.6783449
## PC174 3.6349766
## PC1 3.1855163
## PC114 2.9250423
## PC29 2.8597341
## PC57 2.5770127
## PC138 2.5712020
## PC133 2.4537673
## PC3 2.2430573
## PC30 2.1469129
## PC42 2.0567734
## PC39 1.7709973
## PC119 1.3244086
## PC100 1.2842843
## PC72 0.9524748
## PC109 0.8477182
## PC178 0.6405221
## PC173 0.4007699
## PC124 0.2418955
## PC118 0.1511340
## PC103 0.0000000
## PC106 0.0000000
## PC107 0.0000000
## PC111 0.0000000
## PC112 0.0000000
## PC115 0.0000000
## PC117 0.0000000
## PC123 0.0000000
## PC131 0.0000000
## PC146 0.0000000
## PC149 0.0000000
## PC15 0.0000000
## PC151 0.0000000
## PC154 0.0000000
## PC159 0.0000000
## PC165 0.0000000
## PC167 0.0000000
## PC169 0.0000000
## PC179 0.0000000
## PC180 0.0000000
## PC181 0.0000000
## PC22 0.0000000
## PC43 0.0000000
## PC45 0.0000000
## PC49 0.0000000
## PC53 0.0000000
## PC55 0.0000000
## PC59 0.0000000
## PC61 0.0000000
## PC64 0.0000000
## PC69 0.0000000
## PC70 0.0000000
## PC76 0.0000000
## PC80 0.0000000
## PC81 0.0000000
## PC84 0.0000000
## PC87 0.0000000
## PC90 0.0000000
## PC93 0.0000000
## PC94 0.0000000
## PC98 0.0000000if (glb_is_classification && glb_is_binomial)
glb_analytics_diag_plots(obs_df=glbObsTrn, mdl_id=glbMdlFinId,
prob_threshold=glb_models_df[glb_models_df$id == glbMdlSelId,
"opt.prob.threshold.OOB"]) else
glb_analytics_diag_plots(obs_df=glbObsTrn, mdl_id=glbMdlFinId) ## Warning in glb_analytics_diag_plots(obs_df = glbObsTrn, mdl_id =
## glbMdlFinId, : Limiting important feature scatter plots to 5 out of 182
## [1] "Min/Max Boundaries: "
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 1 4474 R D
## 2 2508 R D
## 3 2485 R R
## 4 3080 R R
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1 0.2636662
## 2 0.4020824
## 3 0.6714298
## 4 0.7771728
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 1 0.7363338
## 2 0.5979176
## 3 0.3285702
## 4 0.2228272
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 1 R
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 1 0.4914286
## 2 0.5222597
## 3 0.5684511
## 4 0.5394151
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 1 0.5085714
## 2 0.4777403
## 3 0.4315489
## 4 0.4605849
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 1 D
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 1 0.3504438
## 2 0.4521924
## 3 0.4911294
## 4 0.4685787
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 1 0.6495562
## 2 0.5478076
## 3 0.5088706
## 4 0.5314213
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 1 D
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 1 0.3503157
## 2 0.4523322
## 3 0.4910870
## 4 0.4686887
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 1 0.6496843
## 2 0.5476678
## 3 0.5089130
## 4 0.5313113
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 1 D 0.3508010
## 2 R 0.4519327
## 3 R 0.4916039
## 4 R 0.4684441
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 1 FALSE TRUE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 1 D
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 1 0.3508010
## 2 0.4519327
## 3 0.4916039
## 4 0.4684441
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 1 D 0.3508010
## 2 R 0.4519327
## 3 R 0.4916039
## 4 R 0.4684441
## Party.fctr.All.X.zv.rcv.glmnet.is.acc Party.fctr.All.X.zv.rcv.glmnet.err
## 1 FALSE TRUE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.center.rcv.glmnet
## 1 D
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.center.rcv.glmnet.prob
## 1 0.3508010
## 2 0.4519327
## 3 0.4916039
## 4 0.4684441
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.scale.rcv.glmnet Party.fctr.All.X.scale.rcv.glmnet.prob
## 1 D 0.3508010
## 2 R 0.4519327
## 3 R 0.4916039
## 4 R 0.4684441
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.center.scale.rcv.glmnet
## 1 D
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 1 0.3508010
## 2 0.4519327
## 3 0.4916039
## 4 0.4684441
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 1 D
## 2 R
## 3 R
## 4 R
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 1 0.3508010
## 2 0.4519327
## 3 0.4916039
## 4 0.4684441
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 1 0.6491990
## 2 0.5480673
## 3 0.5083961
## 4 0.5315559
## Party.fctr.All.X.range.rcv.glmnet Party.fctr.All.X.range.rcv.glmnet.prob
## 1 D 0.3508010
## 2 R 0.4519327
## 3 R 0.4916039
## 4 R 0.4684441
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 1 0.6491990 D
## 2 0.5480673 R
## 3 0.5083961 R
## 4 0.5315559 R
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 1 0.4036735 FALSE
## 2 0.6144276 TRUE
## 3 0.5971240 TRUE
## 4 0.5404456 TRUE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 1 TRUE 0.5963265
## 2 FALSE 0.3855724
## 3 FALSE 0.4028760
## 4 FALSE 0.4595544
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 1 D 0.1444532
## 2 R 0.7774393
## 3 R 0.7742537
## 4 R 0.7833386
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 1 FALSE TRUE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 1 0.8555468 D
## 2 0.2225607 D
## 3 0.2257463 D
## 4 0.2166614 D
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 1 0.2844272 FALSE
## 2 0.4367259 FALSE
## 3 0.5045073 FALSE
## 4 0.3858837 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 1 TRUE 0.7155728
## 2 TRUE 0.5632741
## 3 TRUE 0.4954927
## 4 TRUE 0.6141163
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 1 D 0.1336882
## 2 R 0.5302837
## 3 R 0.7955017
## 4 D 0.3591314
## Party.fctr.All.X..rcv.bayesglm.is.acc Party.fctr.All.X..rcv.bayesglm.err
## 1 FALSE TRUE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 FALSE TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 1 0.8663118 D
## 2 0.4697163 R
## 3 0.2044983 R
## 4 0.6408686 D
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 1 0.1295611 FALSE
## 2 0.5256251 TRUE
## 3 0.7946513 TRUE
## 4 0.3383020 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 1 TRUE 0.8704389
## 2 FALSE 0.4743749
## 3 FALSE 0.2053487
## 4 TRUE 0.6616980
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 1 D 0.2233373
## 2 R 0.5934772
## 3 R 0.7626567
## 4 R 0.5794115
## Party.fctr.All.X..rcv.bagEarth.is.acc Party.fctr.All.X..rcv.bagEarth.err
## 1 FALSE TRUE
## 2 TRUE FALSE
## 3 TRUE FALSE
## 4 TRUE FALSE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 1 0.7766627 D
## 2 0.4065228 R
## 3 0.2373433 R
## 4 0.4205885 R
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 1 0.3429327
## 2 0.4502793
## 3 0.4875585
## 4 0.4718322
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 1 0.6570673 R
## 2 0.5497207 R
## 3 0.5124415 R
## 4 0.5281678 D
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 1 0.838 TRUE
## 2 0.826 TRUE
## 3 0.802 TRUE
## 4 0.540 FALSE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 1 FALSE 0.162
## 2 FALSE 0.174
## 3 FALSE 0.198
## 4 TRUE 0.460
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 1 D 0.2467027
## 2 D 0.5242411
## 3 R 0.6516199
## 4 D 0.3651022
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 TRUE FALSE
## 4 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 1 0.7532973 D
## 2 0.4757589 D
## 3 0.3483801 R
## 4 0.6348978 R
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 1 0.3505759
## 2 0.4309562
## 3 0.4716044
## 4 0.4503105
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 FALSE
## 4 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 1 0.6494241 R
## 2 0.5690438 R
## 3 0.5283956 R
## 4 0.5496895 R
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 1 0.5258048 TRUE
## 2 0.4633499 TRUE
## 3 0.5527971 TRUE
## 4 0.4551633 TRUE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 1 FALSE 0.4741952
## 2 FALSE 0.5366501
## 3 FALSE 0.4472029
## 4 FALSE 0.5448367
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 1 D
## 2 R
## 3 D
## 4 R
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 1 0.2241355
## 2 0.6367009
## 3 0.3743861
## 4 0.6627563
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 1 0.7758645
## 2 0.3632991
## 3 0.6256139
## 4 0.3372437
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 1 0.3680090
## 2 0.4130758
## 3 0.4503665
## 4 0.4153486
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 1 0.6319910
## 2 0.5869242
## 3 0.5496335
## 4 0.5846514
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 1 R 0.6225490
## 2 D 0.3412322
## 3 D 0.2330827
## 4 D 0.3412322
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 1 TRUE FALSE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## Party.fctr.All.X..rcv.rpart.err.abs
## 1 0.3774510
## 2 0.6587678
## 3 0.7669173
## 4 0.6587678
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 1 D
## 2 R
## 3 D
## 4 D
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 1 0.2694411
## 2 0.5531271
## 3 0.2694411
## 4 0.5122987
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 1 0.7305589
## 2 0.4468729
## 3 0.7305589
## 4 0.4877013
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 1 D 0.300000
## 2 R 0.521265
## 3 D 0.300000
## 4 R 0.521265
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 1 FALSE
## 2 TRUE
## 3 FALSE
## 4 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 1 TRUE
## 2 FALSE
## 3 TRUE
## 4 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs Party.fctr.All.X.ica.rcv.glmnet
## 1 0.700000 D
## 2 0.478735 D
## 3 0.700000 D
## 4 0.478735 D
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 1 0.4510318
## 2 0.4552659
## 3 0.4438212
## 4 0.4517449
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 1 0.5489682
## 2 0.5447341
## 3 0.5561788
## 4 0.5482551
## Party.fctr.Final.All.X.zv.pca..glmnet.prob
## 1 0.3060807
## 2 0.3784938
## 3 0.5944617
## 4 0.8247734
## Party.fctr.Final.All.X.zv.pca..glmnet
## 1 D
## 2 D
## 3 R
## 4 R
## Party.fctr.Final.All.X.zv.pca..glmnet.err
## 1 TRUE
## 2 TRUE
## 3 FALSE
## 4 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.err.abs
## 1 0.6939193
## 2 0.6215062
## 3 0.4055383
## 4 0.1752266
## Party.fctr.Final.All.X.zv.pca..glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## Party.fctr.Final.All.X.zv.pca..glmnet.accurate
## 1 FALSE
## 2 FALSE
## 3 TRUE
## 4 TRUE
## Party.fctr.Final.All.X.zv.pca..glmnet.error .label
## 1 -0.14391927 4474
## 2 -0.07150625 2508
## 3 0.00000000 2485
## 4 0.00000000 3080
## [1] "Inaccurate: "
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 1 1461 R D
## 2 4660 R D
## 3 5551 R D
## 4 1264 R D
## 5 3380 R D
## 6 4813 R D
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 1 0.11796328
## 2 0.12748916
## 3 0.09135088
## 4 0.03778821
## 5 0.16603948
## 6 0.30632341
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 1 0.8820367
## 2 0.8725108
## 3 0.9086491
## 4 0.9622118
## 5 0.8339605
## 6 0.6936766
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 1 0.2311483
## 2 0.4117693
## 3 0.3945762
## 4 0.2243570
## 5 0.2857474
## 6 0.3951070
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 1 0.7688517
## 2 0.5882307
## 3 0.6054238
## 4 0.7756430
## 5 0.7142526
## 6 0.6048930
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 1 0.2827234
## 2 0.3292006
## 3 0.3169681
## 4 0.2109323
## 5 0.3171511
## 6 0.3986335
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 1 0.7172766
## 2 0.6707994
## 3 0.6830319
## 4 0.7890677
## 5 0.6828489
## 6 0.6013665
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 1 0.2827498
## 2 0.3292514
## 3 0.3169495
## 4 0.2109067
## 5 0.3172557
## 6 0.3985753
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 1 0.7172502
## 2 0.6707486
## 3 0.6830505
## 4 0.7890933
## 5 0.6827443
## 6 0.6014247
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 1 D 0.2834618
## 2 D 0.3300527
## 3 D 0.3168096
## 4 D 0.2112086
## 5 D 0.3169899
## 6 D 0.3990366
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 1 0.2834618
## 2 0.3300527
## 3 0.3168096
## 4 0.2112086
## 5 0.3169899
## 6 0.3990366
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 1 D 0.2834618
## 2 D 0.3300527
## 3 D 0.3168096
## 4 D 0.2112086
## 5 D 0.3169899
## 6 D 0.3990366
## Party.fctr.All.X.zv.rcv.glmnet.is.acc Party.fctr.All.X.zv.rcv.glmnet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.center.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.center.rcv.glmnet.prob
## 1 0.2834618
## 2 0.3300527
## 3 0.3168096
## 4 0.2112086
## 5 0.3169899
## 6 0.3990366
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.scale.rcv.glmnet Party.fctr.All.X.scale.rcv.glmnet.prob
## 1 D 0.2834618
## 2 D 0.3300527
## 3 D 0.3168096
## 4 D 0.2112086
## 5 D 0.3169899
## 6 D 0.3990366
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.center.scale.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 1 0.2834618
## 2 0.3300527
## 3 0.3168096
## 4 0.2112086
## 5 0.3169899
## 6 0.3990366
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 1 0.2834618
## 2 0.3300527
## 3 0.3168096
## 4 0.2112086
## 5 0.3169899
## 6 0.3990366
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 1 0.7165382
## 2 0.6699473
## 3 0.6831904
## 4 0.7887914
## 5 0.6830101
## 6 0.6009634
## Party.fctr.All.X.range.rcv.glmnet Party.fctr.All.X.range.rcv.glmnet.prob
## 1 D 0.2834618
## 2 D 0.3300527
## 3 D 0.3168096
## 4 D 0.2112086
## 5 D 0.3169899
## 6 D 0.3990366
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 1 0.7165382 D
## 2 0.6699473 D
## 3 0.6831904 D
## 4 0.7887914 D
## 5 0.6830101 D
## 6 0.6009634 D
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 1 0.19192465 FALSE
## 2 0.41698583 FALSE
## 3 0.32116476 FALSE
## 4 0.08076739 FALSE
## 5 0.28610530 FALSE
## 6 0.31398937 FALSE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 1 TRUE 0.8080753
## 2 TRUE 0.5830142
## 3 TRUE 0.6788352
## 4 TRUE 0.9192326
## 5 TRUE 0.7138947
## 6 TRUE 0.6860106
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 1 D 0.1444532
## 2 D 0.1444532
## 3 D 0.1444532
## 4 D 0.1444532
## 5 D 0.1444532
## 6 D 0.1444532
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 1 0.8555468 D
## 2 0.8555468 D
## 3 0.8555468 D
## 4 0.8555468 D
## 5 0.8555468 D
## 6 0.8555468 D
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 1 0.25033993 FALSE
## 2 0.16884709 FALSE
## 3 0.20174389 FALSE
## 4 0.04308791 FALSE
## 5 0.20503928 FALSE
## 6 0.39475833 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 1 TRUE 0.7496601
## 2 TRUE 0.8311529
## 3 TRUE 0.7982561
## 4 TRUE 0.9569121
## 5 TRUE 0.7949607
## 6 TRUE 0.6052417
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 1 D 0.01920540
## 2 D 0.02000910
## 3 D 0.11283014
## 4 D 0.00161350
## 5 D 0.09938011
## 6 D 0.26380084
## Party.fctr.All.X..rcv.bayesglm.is.acc Party.fctr.All.X..rcv.bayesglm.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 1 0.9807946 D
## 2 0.9799909 D
## 3 0.8871699 D
## 4 0.9983865 D
## 5 0.9006199 D
## 6 0.7361992 D
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 1 0.011804208 FALSE
## 2 0.017602457 FALSE
## 3 0.120404078 FALSE
## 4 0.001271532 FALSE
## 5 0.098717268 FALSE
## 6 0.260042867 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 1 TRUE 0.9881958
## 2 TRUE 0.9823975
## 3 TRUE 0.8795959
## 4 TRUE 0.9987285
## 5 TRUE 0.9012827
## 6 TRUE 0.7399571
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 1 D 0.11387685
## 2 D 0.09763399
## 3 D 0.19159947
## 4 D 0.02797337
## 5 D 0.28426098
## 6 D 0.33205087
## Party.fctr.All.X..rcv.bagEarth.is.acc Party.fctr.All.X..rcv.bagEarth.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 1 0.8861231 D
## 2 0.9023660 D
## 3 0.8084005 D
## 4 0.9720266 D
## 5 0.7157390 D
## 6 0.6679491 D
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 1 0.3065293
## 2 0.3244694
## 3 0.3096822
## 4 0.2244944
## 5 0.3133470
## 6 0.3948380
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 1 0.6934707 R
## 2 0.6755306 R
## 3 0.6903178 R
## 4 0.7755056 D
## 5 0.6866530 R
## 6 0.6051620 R
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 1 0.730 TRUE
## 2 0.750 TRUE
## 3 0.772 TRUE
## 4 0.336 FALSE
## 5 0.778 TRUE
## 6 0.752 TRUE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 1 FALSE 0.270
## 2 FALSE 0.250
## 3 FALSE 0.228
## 4 TRUE 0.664
## 5 FALSE 0.222
## 6 FALSE 0.248
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 1 D 0.36365577
## 2 D 0.24670315
## 3 D 0.24229297
## 4 D 0.08222648
## 5 D 0.04029538
## 6 D 0.49026851
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 1 0.6363442 D
## 2 0.7532968 D
## 3 0.7577070 D
## 4 0.9177735 D
## 5 0.9597046 D
## 6 0.5097315 D
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 1 0.2845409
## 2 0.3539511
## 3 0.3192201
## 4 0.2260633
## 5 0.3034916
## 6 0.4056257
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 1 0.7154591 D
## 2 0.6460489 R
## 3 0.6807799 D
## 4 0.7739367 D
## 5 0.6965084 D
## 6 0.5943743 D
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 1 0.3020488 FALSE
## 2 0.4959599 TRUE
## 3 0.4203792 FALSE
## 4 0.2761808 FALSE
## 5 0.3005347 FALSE
## 6 0.2686179 FALSE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 1 TRUE 0.6979512
## 2 FALSE 0.5040401
## 3 TRUE 0.5796208
## 4 TRUE 0.7238192
## 5 TRUE 0.6994653
## 6 TRUE 0.7313821
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 R
## 6 D
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 1 0.2309237
## 2 0.1689843
## 3 0.3063474
## 4 0.1562647
## 5 0.5866924
## 6 0.4026004
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 TRUE
## 6 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 FALSE
## 6 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 1 0.7690763
## 2 0.8310157
## 3 0.6936526
## 4 0.8437353
## 5 0.4133076
## 6 0.5973996
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 1 0.3459378
## 2 0.4010354
## 3 0.3347352
## 4 0.3087263
## 5 0.3392487
## 6 0.4262778
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 1 0.6540622
## 2 0.5989646
## 3 0.6652648
## 4 0.6912737
## 5 0.6607513
## 6 0.5737222
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 1 D 0.2330827
## 2 D 0.2330827
## 3 D 0.2330827
## 4 D 0.2330827
## 5 D 0.3412322
## 6 D 0.3412322
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 1 FALSE TRUE
## 2 FALSE TRUE
## 3 FALSE TRUE
## 4 FALSE TRUE
## 5 FALSE TRUE
## 6 FALSE TRUE
## Party.fctr.All.X..rcv.rpart.err.abs
## 1 0.7669173
## 2 0.7669173
## 3 0.7669173
## 4 0.7669173
## 5 0.6587678
## 6 0.6587678
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 1 0.2694411
## 2 0.2694411
## 3 0.3479286
## 4 0.2694411
## 5 0.4610815
## 6 0.4206517
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 1 0.7305589
## 2 0.7305589
## 3 0.6520714
## 4 0.7305589
## 5 0.5389185
## 6 0.5793483
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 1 D 0.3000000
## 2 D 0.3000000
## 3 D 0.3000000
## 4 D 0.3000000
## 5 D 0.4231928
## 6 D 0.4231928
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs Party.fctr.All.X.ica.rcv.glmnet
## 1 0.7000000 D
## 2 0.7000000 D
## 3 0.7000000 D
## 4 0.7000000 D
## 5 0.5768072 D
## 6 0.5768072 D
## Party.fctr.All.X.ica.rcv.glmnet.prob
## 1 0.4548490
## 2 0.4427013
## 3 0.4311697
## 4 0.4533077
## 5 0.4433036
## 6 0.4973842
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 1 0.5451510
## 2 0.5572987
## 3 0.5688303
## 4 0.5466923
## 5 0.5566964
## 6 0.5026158
## Party.fctr.Final.All.X.zv.pca..glmnet.prob
## 1 0.08690793
## 2 0.11737755
## 3 0.12472114
## 4 0.13012264
## 5 0.14371284
## 6 0.19321859
## Party.fctr.Final.All.X.zv.pca..glmnet
## 1 D
## 2 D
## 3 D
## 4 D
## 5 D
## 6 D
## Party.fctr.Final.All.X.zv.pca..glmnet.err
## 1 TRUE
## 2 TRUE
## 3 TRUE
## 4 TRUE
## 5 TRUE
## 6 TRUE
## Party.fctr.Final.All.X.zv.pca..glmnet.err.abs
## 1 0.9130921
## 2 0.8826224
## 3 0.8752789
## 4 0.8698774
## 5 0.8562872
## 6 0.8067814
## Party.fctr.Final.All.X.zv.pca..glmnet.is.acc
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.accurate
## 1 FALSE
## 2 FALSE
## 3 FALSE
## 4 FALSE
## 5 FALSE
## 6 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.error
## 1 -0.3630921
## 2 -0.3326224
## 3 -0.3252789
## 4 -0.3198774
## 5 -0.3062872
## 6 -0.2567814
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 70 746 R D
## 426 2401 D R
## 500 3636 D R
## 562 6109 D R
## 600 6670 D R
## 729 2495 D R
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 70 0.2544340
## 426 0.5175626
## 500 0.6283889
## 562 0.5210199
## 600 0.5938542
## 729 0.8651290
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 70 0.7455660
## 426 0.5175626
## 500 0.6283889
## 562 0.5210199
## 600 0.5938542
## 729 0.8651290
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 D
## 600 R
## 729 R
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 70 0.3737626
## 426 0.4827789
## 500 0.4891710
## 562 0.4368080
## 600 0.4744747
## 729 0.7004556
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 TRUE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 FALSE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 70 0.6262374
## 426 0.4827789
## 500 0.4891710
## 562 0.4368080
## 600 0.4744747
## 729 0.7004556
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 70 0.3676866
## 426 0.5101833
## 500 0.4949738
## 562 0.4773279
## 600 0.5252663
## 729 0.7299054
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 70 0.6323134
## 426 0.5101833
## 500 0.4949738
## 562 0.4773279
## 600 0.5252663
## 729 0.7299054
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 70 0.3675931
## 426 0.5101956
## 500 0.4950981
## 562 0.4773462
## 600 0.5252833
## 729 0.7299533
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 70 0.6324069
## 426 0.5101956
## 500 0.4950981
## 562 0.4773462
## 600 0.5252833
## 729 0.7299533
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 70 D 0.3668637
## 426 R 0.5113655
## 500 R 0.4948458
## 562 R 0.4763355
## 600 R 0.5240938
## 729 R 0.7304513
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 70 FALSE TRUE
## 426 FALSE TRUE
## 500 FALSE TRUE
## 562 FALSE TRUE
## 600 FALSE TRUE
## 729 FALSE TRUE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 70 0.3668637
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 70 D 0.3668637
## 426 R 0.5113655
## 500 R 0.4948458
## 562 R 0.4763355
## 600 R 0.5240938
## 729 R 0.7304513
## Party.fctr.All.X.zv.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.zv.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.center.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.center.rcv.glmnet.prob
## 70 0.3668637
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.scale.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 70 0.3668637
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.center.scale.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 70 0.3668637
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 70 0.3668637
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 70 0.6331363
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.range.rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.All.X.range.rcv.glmnet.prob
## 70 0.3668637
## 426 0.5113655
## 500 0.4948458
## 562 0.4763355
## 600 0.5240938
## 729 0.7304513
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 70 0.6331363 D
## 426 0.5113655 D
## 500 0.4948458 R
## 562 0.4763355 R
## 600 0.5240938 R
## 729 0.7304513 R
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 70 0.2855277 FALSE
## 426 0.4594820 TRUE
## 500 0.6359112 FALSE
## 562 0.5714126 FALSE
## 600 0.5247509 FALSE
## 729 0.5938901 FALSE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 70 TRUE 0.7144723
## 426 FALSE 0.4594820
## 500 TRUE 0.6359112
## 562 TRUE 0.5714126
## 600 TRUE 0.5247509
## 729 TRUE 0.5938901
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 70 D 0.1444532
## 426 D 0.1455822
## 500 R 0.7833004
## 562 R 0.7811683
## 600 R 0.7833393
## 729 R 0.7833399
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 70 FALSE TRUE
## 426 TRUE FALSE
## 500 FALSE TRUE
## 562 FALSE TRUE
## 600 FALSE TRUE
## 729 FALSE TRUE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 70 0.8555468 D
## 426 0.1455822 R
## 500 0.7833004 D
## 562 0.7811683 D
## 600 0.7833393 R
## 729 0.7833399 R
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 70 0.2370228 FALSE
## 426 0.5863765 FALSE
## 500 0.4940065 TRUE
## 562 0.4940065 TRUE
## 600 0.5863765 FALSE
## 729 0.9309095 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 70 TRUE 0.7629772
## 426 TRUE 0.5863765
## 500 FALSE 0.4940065
## 562 FALSE 0.4940065
## 600 TRUE 0.5863765
## 729 TRUE 0.9309095
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 70 D 0.1763514
## 426 R 0.6211378
## 500 R 0.6740041
## 562 R 0.5245943
## 600 R 0.6297283
## 729 R 0.7296342
## Party.fctr.All.X..rcv.bayesglm.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X..rcv.bayesglm.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 70 0.8236486 D
## 426 0.6211378 R
## 500 0.6740041 R
## 562 0.5245943 R
## 600 0.6297283 R
## 729 0.7296342 R
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 70 0.1785975 FALSE
## 426 0.6244061 FALSE
## 500 0.6793495 FALSE
## 562 0.5248468 FALSE
## 600 0.6297394 FALSE
## 729 0.7229135 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 70 TRUE 0.8214025
## 426 TRUE 0.6244061
## 500 TRUE 0.6793495
## 562 TRUE 0.5248468
## 600 TRUE 0.6297394
## 729 TRUE 0.7229135
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 70 D 0.1686488
## 426 D 0.4935367
## 500 R 0.5957834
## 562 D 0.4911824
## 600 R 0.5871542
## 729 R 0.6180485
## Party.fctr.All.X..rcv.bagEarth.is.acc
## 70 FALSE
## 426 TRUE
## 500 FALSE
## 562 TRUE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X..rcv.bagEarth.err
## 70 TRUE
## 426 FALSE
## 500 TRUE
## 562 FALSE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 70 0.8313512 D
## 426 0.4935367 R
## 500 0.5957834 R
## 562 0.4911824 R
## 600 0.5871542 R
## 729 0.6180485 R
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 70 0.3611470
## 426 0.5111653
## 500 0.4958496
## 562 0.4766174
## 600 0.5243433
## 729 0.7276517
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 70 0.6388530 R
## 426 0.5111653 D
## 500 0.4958496 D
## 562 0.4766174 D
## 600 0.5243433 D
## 729 0.7276517 D
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 70 0.748 TRUE
## 426 0.178 TRUE
## 500 0.260 TRUE
## 562 0.248 TRUE
## 600 0.206 TRUE
## 729 0.206 TRUE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 70 FALSE 0.252
## 426 FALSE 0.178
## 500 FALSE 0.260
## 562 FALSE 0.248
## 600 FALSE 0.206
## 729 FALSE 0.206
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 70 D 0.3631409
## 426 D 0.4380251
## 500 D 0.4480571
## 562 D 0.4322077
## 600 D 0.2356312
## 729 R 0.7896968
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 70 FALSE TRUE
## 426 TRUE FALSE
## 500 TRUE FALSE
## 562 TRUE FALSE
## 600 TRUE FALSE
## 729 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 70 0.6368591 D
## 426 0.4380251 R
## 500 0.4480571 R
## 562 0.4322077 R
## 600 0.2356312 R
## 729 0.7896968 R
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 70 0.3647318
## 426 0.5108779
## 500 0.4950335
## 562 0.4760422
## 600 0.5237310
## 729 0.7304119
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 70 0.6352682 D
## 426 0.5108779 R
## 500 0.4950335 R
## 562 0.4760422 R
## 600 0.5237310 R
## 729 0.7304119 R
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 70 0.4041615 FALSE
## 426 0.5310979 FALSE
## 500 0.5240342 FALSE
## 562 0.4638889 FALSE
## 600 0.5316846 FALSE
## 729 0.7207068 FALSE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 70 TRUE 0.5958385
## 426 TRUE 0.5310979
## 500 TRUE 0.5240342
## 562 TRUE 0.4638889
## 600 TRUE 0.5316846
## 729 TRUE 0.7207068
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 D
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 70 0.3292065
## 426 0.5224378
## 500 0.5224378
## 562 0.5224378
## 600 0.5224378
## 729 0.3671420
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 70 0.6707935
## 426 0.5224378
## 500 0.5224378
## 562 0.5224378
## 600 0.5224378
## 729 0.3671420
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 70 D
## 426 D
## 500 D
## 562 D
## 600 R
## 729 R
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 70 0.3669491
## 426 0.4998752
## 500 0.4922469
## 562 0.4928968
## 600 0.5166248
## 729 0.6351164
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 70 FALSE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 70 TRUE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 70 0.6330509
## 426 0.4998752
## 500 0.4922469
## 562 0.4928968
## 600 0.5166248
## 729 0.6351164
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 70 D 0.2330827
## 426 D 0.5385802
## 500 D 0.5385802
## 562 D 0.5385802
## 600 D 0.5385802
## 729 R 0.6225490
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 70 FALSE TRUE
## 426 TRUE FALSE
## 500 TRUE FALSE
## 562 TRUE FALSE
## 600 TRUE FALSE
## 729 FALSE TRUE
## Party.fctr.All.X..rcv.rpart.err.abs
## 70 0.7669173
## 426 0.5385802
## 500 0.5385802
## 562 0.5385802
## 600 0.5385802
## 729 0.6225490
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 70 D
## 426 D
## 500 D
## 562 D
## 600 D
## 729 D
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 70 0.3479286
## 426 0.5122987
## 500 0.5122987
## 562 0.5122987
## 600 0.5122987
## 729 0.5122987
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 70 FALSE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 70 TRUE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 70 0.6520714
## 426 0.5122987
## 500 0.5122987
## 562 0.5122987
## 600 0.5122987
## 729 0.5122987
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 70 D 0.300000
## 426 R 0.521265
## 500 R 0.521265
## 562 R 0.521265
## 600 R 0.521265
## 729 R 0.521265
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs
## 70 0.700000
## 426 0.521265
## 500 0.521265
## 562 0.521265
## 600 0.521265
## 729 0.521265
## Party.fctr.All.X.ica.rcv.glmnet Party.fctr.All.X.ica.rcv.glmnet.prob
## 70 D 0.4610633
## 426 D 0.4907410
## 500 D 0.4673908
## 562 D 0.4582487
## 600 D 0.4850992
## 729 D 0.4487614
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 70 FALSE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 70 TRUE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 70 0.5389367
## 426 0.4907410
## 500 0.4673908
## 562 0.4582487
## 600 0.4850992
## 729 0.4487614
## Party.fctr.Final.All.X.zv.pca..glmnet.prob
## 70 0.3218174
## 426 0.4982374
## 500 0.5234933
## 562 0.5466003
## 600 0.5717076
## 729 0.7996728
## Party.fctr.Final.All.X.zv.pca..glmnet
## 70 D
## 426 R
## 500 R
## 562 R
## 600 R
## 729 R
## Party.fctr.Final.All.X.zv.pca..glmnet.err
## 70 TRUE
## 426 TRUE
## 500 TRUE
## 562 TRUE
## 600 TRUE
## 729 TRUE
## Party.fctr.Final.All.X.zv.pca..glmnet.err.abs
## 70 0.6781826
## 426 0.4982374
## 500 0.5234933
## 562 0.5466003
## 600 0.5717076
## 729 0.7996728
## Party.fctr.Final.All.X.zv.pca..glmnet.is.acc
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.accurate
## 70 FALSE
## 426 FALSE
## 500 FALSE
## 562 FALSE
## 600 FALSE
## 729 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.error
## 70 -0.12818258
## 426 0.04823737
## 500 0.07349329
## 562 0.09660031
## 600 0.12170760
## 729 0.34967279
## USER_ID Party.fctr Party.fctr.All.X.zv.pca.rcv.glmnet
## 727 1538 D R
## 728 6053 D R
## 729 2495 D R
## 730 4350 D R
## 731 4361 D R
## 732 3431 D R
## Party.fctr.All.X.zv.pca.rcv.glmnet.prob
## 727 0.7803481
## 728 0.7755771
## 729 0.8651290
## 730 0.7529986
## 731 0.9053814
## 732 0.9329386
## Party.fctr.All.X.zv.pca.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.zv.pca.rcv.glmnet.err.abs
## 727 0.7803481
## 728 0.7755771
## 729 0.8651290
## 730 0.7529986
## 731 0.9053814
## 732 0.9329386
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.prob
## 727 0.6622853
## 728 0.5840539
## 729 0.7004556
## 730 0.6232594
## 731 0.7246530
## 732 0.6312103
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.zv.YeoJohnson.pca.rcv.glmnet.err.abs
## 727 0.6622853
## 728 0.5840539
## 729 0.7004556
## 730 0.6232594
## 731 0.7246530
## 732 0.6312103
## Party.fctr.All.X.YeoJohnson.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.prob
## 727 0.6930173
## 728 0.4795182
## 729 0.7299054
## 730 0.6429092
## 731 0.6860480
## 732 0.6486672
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.YeoJohnson.rcv.glmnet.err.abs
## 727 0.6930173
## 728 0.4795182
## 729 0.7299054
## 730 0.6429092
## 731 0.6860480
## 732 0.6486672
## Party.fctr.All.X.expoTrans.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.expoTrans.rcv.glmnet.prob
## 727 0.6930370
## 728 0.4794746
## 729 0.7299533
## 730 0.6429143
## 731 0.6861798
## 732 0.6486920
## Party.fctr.All.X.expoTrans.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.expoTrans.rcv.glmnet.err.abs
## 727 0.6930370
## 728 0.4794746
## 729 0.7299533
## 730 0.6429143
## 731 0.6861798
## 732 0.6486920
## Party.fctr.All.X..rcv.glmnet Party.fctr.All.X..rcv.glmnet.prob
## 727 R 0.6937111
## 728 R 0.4788302
## 729 R 0.7304513
## 730 R 0.6431843
## 731 R 0.6854357
## 732 R 0.6495350
## Party.fctr.All.X..rcv.glmnet.is.acc Party.fctr.All.X..rcv.glmnet.err
## 727 FALSE TRUE
## 728 FALSE TRUE
## 729 FALSE TRUE
## 730 FALSE TRUE
## 731 FALSE TRUE
## 732 FALSE TRUE
## Party.fctr.All.X..rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.conditionalX.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.conditionalX.rcv.glmnet.prob
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.conditionalX.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.conditionalX.rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.zv.rcv.glmnet Party.fctr.All.X.zv.rcv.glmnet.prob
## 727 R 0.6937111
## 728 R 0.4788302
## 729 R 0.7304513
## 730 R 0.6431843
## 731 R 0.6854357
## 732 R 0.6495350
## Party.fctr.All.X.zv.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.zv.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.zv.rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.center.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.center.rcv.glmnet.prob
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.center.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.center.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.center.rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.scale.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.scale.rcv.glmnet.prob
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.scale.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.scale.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.scale.rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.center.scale.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.center.scale.rcv.glmnet.prob
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.center.scale.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.center.scale.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.center.scale.rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.BoxCox.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.BoxCox.rcv.glmnet.prob
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.BoxCox.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.BoxCox.rcv.glmnet.err.abs
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.range.rcv.glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.range.rcv.glmnet.prob
## 727 0.6937111
## 728 0.4788302
## 729 0.7304513
## 730 0.6431843
## 731 0.6854357
## 732 0.6495350
## Party.fctr.All.X.range.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.range.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.range.rcv.glmnet.err.abs Party.fctr.All.X..rcv.gbm
## 727 0.6937111 R
## 728 0.4788302 R
## 729 0.7304513 R
## 730 0.6431843 D
## 731 0.6854357 R
## 732 0.6495350 R
## Party.fctr.All.X..rcv.gbm.prob Party.fctr.All.X..rcv.gbm.is.acc
## 727 0.5602591 FALSE
## 728 0.6022095 FALSE
## 729 0.5938901 FALSE
## 730 0.4495837 TRUE
## 731 0.6500572 FALSE
## 732 0.6668366 FALSE
## Party.fctr.All.X..rcv.gbm.err Party.fctr.All.X..rcv.gbm.err.abs
## 727 TRUE 0.5602591
## 728 TRUE 0.6022095
## 729 TRUE 0.5938901
## 730 FALSE 0.4495837
## 731 TRUE 0.6500572
## 732 TRUE 0.6668366
## Party.fctr.All.X..rcv.nnet Party.fctr.All.X..rcv.nnet.prob
## 727 R 0.7833399
## 728 R 0.7833399
## 729 R 0.7833399
## 730 R 0.7833399
## 731 R 0.7833399
## 732 R 0.7833399
## Party.fctr.All.X..rcv.nnet.is.acc Party.fctr.All.X..rcv.nnet.err
## 727 FALSE TRUE
## 728 FALSE TRUE
## 729 FALSE TRUE
## 730 FALSE TRUE
## 731 FALSE TRUE
## 732 FALSE TRUE
## Party.fctr.All.X..rcv.nnet.err.abs Party.fctr.All.X..rcv.earth
## 727 0.7833399 R
## 728 0.7833399 D
## 729 0.7833399 R
## 730 0.7833399 R
## 731 0.7833399 R
## 732 0.7833399 R
## Party.fctr.All.X..rcv.earth.prob Party.fctr.All.X..rcv.earth.is.acc
## 727 0.8490961 FALSE
## 728 0.4951513 TRUE
## 729 0.9309095 FALSE
## 730 0.7412024 FALSE
## 731 0.7462187 FALSE
## 732 0.8102143 FALSE
## Party.fctr.All.X..rcv.earth.err Party.fctr.All.X..rcv.earth.err.abs
## 727 TRUE 0.8490961
## 728 FALSE 0.4951513
## 729 TRUE 0.9309095
## 730 TRUE 0.7412024
## 731 TRUE 0.7462187
## 732 TRUE 0.8102143
## Party.fctr.All.X..rcv.bayesglm Party.fctr.All.X..rcv.bayesglm.prob
## 727 R 0.7786284
## 728 R 0.7953554
## 729 R 0.7296342
## 730 R 0.7803312
## 731 R 0.8282327
## 732 R 0.9827616
## Party.fctr.All.X..rcv.bayesglm.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X..rcv.bayesglm.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X..rcv.bayesglm.err.abs Party.fctr.All.X..rcv.glm
## 727 0.7786284 R
## 728 0.7953554 R
## 729 0.7296342 R
## 730 0.7803312 R
## 731 0.8282327 R
## 732 0.9827616 R
## Party.fctr.All.X..rcv.glm.prob Party.fctr.All.X..rcv.glm.is.acc
## 727 0.7742563 FALSE
## 728 0.8016424 FALSE
## 729 0.7229135 FALSE
## 730 0.7837171 FALSE
## 731 0.8168588 FALSE
## 732 0.9851010 FALSE
## Party.fctr.All.X..rcv.glm.err Party.fctr.All.X..rcv.glm.err.abs
## 727 TRUE 0.7742563
## 728 TRUE 0.8016424
## 729 TRUE 0.7229135
## 730 TRUE 0.7837171
## 731 TRUE 0.8168588
## 732 TRUE 0.9851010
## Party.fctr.All.X..rcv.bagEarth Party.fctr.All.X..rcv.bagEarth.prob
## 727 R 0.7792907
## 728 R 0.7122612
## 729 R 0.6180485
## 730 R 0.7414671
## 731 R 0.7143307
## 732 R 0.8638982
## Party.fctr.All.X..rcv.bagEarth.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X..rcv.bagEarth.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X..rcv.bagEarth.err.abs Party.fctr.All.X.nzv.rcv.glmnet
## 727 0.7792907 R
## 728 0.7122612 R
## 729 0.6180485 R
## 730 0.7414671 R
## 731 0.7143307 R
## 732 0.8638982 R
## Party.fctr.All.X.nzv.rcv.glmnet.prob
## 727 0.6905703
## 728 0.4798541
## 729 0.7276517
## 730 0.6657469
## 731 0.6841193
## 732 0.6477985
## Party.fctr.All.X.nzv.rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.nzv.rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.nzv.rcv.glmnet.err.abs Party.fctr.All.X..rcv.rf
## 727 0.6905703 D
## 728 0.4798541 D
## 729 0.7276517 D
## 730 0.6657469 D
## 731 0.6841193 R
## 732 0.6477985 D
## Party.fctr.All.X..rcv.rf.prob Party.fctr.All.X..rcv.rf.is.acc
## 727 0.206 TRUE
## 728 0.228 TRUE
## 729 0.206 TRUE
## 730 0.178 TRUE
## 731 0.646 FALSE
## 732 0.172 TRUE
## Party.fctr.All.X..rcv.rf.err Party.fctr.All.X..rcv.rf.err.abs
## 727 FALSE 0.206
## 728 FALSE 0.228
## 729 FALSE 0.206
## 730 FALSE 0.178
## 731 TRUE 0.646
## 732 FALSE 0.172
## Party.fctr.All.X..rcv.avNNet Party.fctr.All.X..rcv.avNNet.prob
## 727 R 0.7709107
## 728 D 0.3730336
## 729 R 0.7896968
## 730 R 0.7975137
## 731 R 0.7536152
## 732 R 0.8162250
## Party.fctr.All.X..rcv.avNNet.is.acc Party.fctr.All.X..rcv.avNNet.err
## 727 FALSE TRUE
## 728 TRUE FALSE
## 729 FALSE TRUE
## 730 FALSE TRUE
## 731 FALSE TRUE
## 732 FALSE TRUE
## Party.fctr.All.X..rcv.avNNet.err.abs Party.fctr.Low.cor.X..rcv.glmnet
## 727 0.7709107 R
## 728 0.3730336 R
## 729 0.7896968 R
## 730 0.7975137 R
## 731 0.7536152 R
## 732 0.8162250 R
## Party.fctr.Low.cor.X..rcv.glmnet.prob
## 727 0.6981647
## 728 0.4739222
## 729 0.7304119
## 730 0.6322402
## 731 0.7062437
## 732 0.6308609
## Party.fctr.Low.cor.X..rcv.glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.Low.cor.X..rcv.glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.Low.cor.X..rcv.glmnet.err.abs Party.fctr.RFE.X..rcv.glmnet
## 727 0.6981647 R
## 728 0.4739222 D
## 729 0.7304119 R
## 730 0.6322402 R
## 731 0.7062437 R
## 732 0.6308609 R
## Party.fctr.RFE.X..rcv.glmnet.prob Party.fctr.RFE.X..rcv.glmnet.is.acc
## 727 0.7904739 FALSE
## 728 0.3200914 TRUE
## 729 0.7207068 FALSE
## 730 0.7572454 FALSE
## 731 0.7874528 FALSE
## 732 0.6445720 FALSE
## Party.fctr.RFE.X..rcv.glmnet.err Party.fctr.RFE.X..rcv.glmnet.err.abs
## 727 TRUE 0.7904739
## 728 FALSE 0.3200914
## 729 TRUE 0.7207068
## 730 TRUE 0.7572454
## 731 TRUE 0.7874528
## 732 TRUE 0.6445720
## Party.fctr.Interact.High.cor.Y..rcv.glmnet
## 727 D
## 728 D
## 729 D
## 730 R
## 731 R
## 732 R
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.prob
## 727 0.4249582
## 728 0.4264943
## 729 0.3671420
## 730 0.6114567
## 731 0.5249303
## 732 0.5592429
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.is.acc
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.Interact.High.cor.Y..rcv.glmnet.err.abs
## 727 0.4249582
## 728 0.4264943
## 729 0.3671420
## 730 0.6114567
## 731 0.5249303
## 732 0.5592429
## Party.fctr.All.X.spatialSign.rcv.glmnet
## 727 R
## 728 D
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.All.X.spatialSign.rcv.glmnet.prob
## 727 0.6033326
## 728 0.4327106
## 729 0.6351164
## 730 0.5742117
## 731 0.6301253
## 732 0.5725896
## Party.fctr.All.X.spatialSign.rcv.glmnet.is.acc
## 727 FALSE
## 728 TRUE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err
## 727 TRUE
## 728 FALSE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.spatialSign.rcv.glmnet.err.abs
## 727 0.6033326
## 728 0.4327106
## 729 0.6351164
## 730 0.5742117
## 731 0.6301253
## 732 0.5725896
## Party.fctr.All.X..rcv.rpart Party.fctr.All.X..rcv.rpart.prob
## 727 R 0.6225490
## 728 D 0.4269231
## 729 R 0.6225490
## 730 R 0.6225490
## 731 R 0.6225490
## 732 R 0.6225490
## Party.fctr.All.X..rcv.rpart.is.acc Party.fctr.All.X..rcv.rpart.err
## 727 FALSE TRUE
## 728 TRUE FALSE
## 729 FALSE TRUE
## 730 FALSE TRUE
## 731 FALSE TRUE
## 732 FALSE TRUE
## Party.fctr.All.X..rcv.rpart.err.abs
## 727 0.6225490
## 728 0.4269231
## 729 0.6225490
## 730 0.6225490
## 731 0.6225490
## 732 0.6225490
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet
## 727 R
## 728 D
## 729 D
## 730 R
## 731 R
## 732 D
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.prob
## 727 0.5531271
## 728 0.4206517
## 729 0.5122987
## 730 0.5531271
## 731 0.5531271
## 732 0.4610815
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.is.acc
## 727 FALSE
## 728 TRUE
## 729 TRUE
## 730 FALSE
## 731 FALSE
## 732 TRUE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err
## 727 TRUE
## 728 FALSE
## 729 FALSE
## 730 TRUE
## 731 TRUE
## 732 FALSE
## Party.fctr.Max.cor.Y.rcv.1X1...glmnet.err.abs
## 727 0.5531271
## 728 0.4206517
## 729 0.5122987
## 730 0.5531271
## 731 0.5531271
## 732 0.4610815
## Party.fctr.Max.cor.Y..rcv.rpart Party.fctr.Max.cor.Y..rcv.rpart.prob
## 727 R 0.5212650
## 728 D 0.4231928
## 729 R 0.5212650
## 730 R 0.5212650
## 731 R 0.5212650
## 732 D 0.4231928
## Party.fctr.Max.cor.Y..rcv.rpart.is.acc
## 727 FALSE
## 728 TRUE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 TRUE
## Party.fctr.Max.cor.Y..rcv.rpart.err
## 727 TRUE
## 728 FALSE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 FALSE
## Party.fctr.Max.cor.Y..rcv.rpart.err.abs
## 727 0.5212650
## 728 0.4231928
## 729 0.5212650
## 730 0.5212650
## 731 0.5212650
## 732 0.4231928
## Party.fctr.All.X.ica.rcv.glmnet Party.fctr.All.X.ica.rcv.glmnet.prob
## 727 D 0.4408493
## 728 D 0.4720174
## 729 D 0.4487614
## 730 D 0.4447195
## 731 D 0.4612744
## 732 D 0.4479286
## Party.fctr.All.X.ica.rcv.glmnet.is.acc
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.All.X.ica.rcv.glmnet.err
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.All.X.ica.rcv.glmnet.err.abs
## 727 0.4408493
## 728 0.4720174
## 729 0.4487614
## 730 0.4447195
## 731 0.4612744
## 732 0.4479286
## Party.fctr.Final.All.X.zv.pca..glmnet.prob
## 727 0.7896524
## 728 0.7911609
## 729 0.7996728
## 730 0.8214812
## 731 0.8453652
## 732 0.8825761
## Party.fctr.Final.All.X.zv.pca..glmnet
## 727 R
## 728 R
## 729 R
## 730 R
## 731 R
## 732 R
## Party.fctr.Final.All.X.zv.pca..glmnet.err
## 727 TRUE
## 728 TRUE
## 729 TRUE
## 730 TRUE
## 731 TRUE
## 732 TRUE
## Party.fctr.Final.All.X.zv.pca..glmnet.err.abs
## 727 0.7896524
## 728 0.7911609
## 729 0.7996728
## 730 0.8214812
## 731 0.8453652
## 732 0.8825761
## Party.fctr.Final.All.X.zv.pca..glmnet.is.acc
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.accurate
## 727 FALSE
## 728 FALSE
## 729 FALSE
## 730 FALSE
## 731 FALSE
## 732 FALSE
## Party.fctr.Final.All.X.zv.pca..glmnet.error
## 727 0.3396524
## 728 0.3411609
## 729 0.3496728
## 730 0.3714812
## 731 0.3953652
## 732 0.4325761
dsp_feats_vctr <- c(NULL)
for(var in grep(".imp", names(glb_feats_df), fixed=TRUE, value=TRUE))
dsp_feats_vctr <- union(dsp_feats_vctr,
glb_feats_df[!is.na(glb_feats_df[, var]), "id"])
# print(glbObsTrn[glbObsTrn$UniqueID %in% FN_OOB_ids,
# grep(glb_rsp_var, names(glbObsTrn), value=TRUE)])
print(setdiff(names(glbObsTrn), names(glbObsAll)))## [1] "Party.fctr.Final.All.X.zv.pca..glmnet.prob"
## [2] "Party.fctr.Final.All.X.zv.pca..glmnet"
## [3] "Party.fctr.Final.All.X.zv.pca..glmnet.err"
## [4] "Party.fctr.Final.All.X.zv.pca..glmnet.err.abs"
## [5] "Party.fctr.Final.All.X.zv.pca..glmnet.is.acc"for (col in setdiff(names(glbObsTrn), names(glbObsAll)))
# Merge or cbind ?
glbObsAll[glbObsAll$.src == "Train", col] <- glbObsTrn[, col]
print(setdiff(names(glbObsFit), names(glbObsAll)))## character(0)print(setdiff(names(glbObsOOB), names(glbObsAll)))## character(0)for (col in setdiff(names(glbObsOOB), names(glbObsAll)))
# Merge or cbind ?
glbObsAll[glbObsAll$.lcn == "OOB", col] <- glbObsOOB[, col]
print(setdiff(names(glbObsNew), names(glbObsAll)))## character(0)#glb2Sav(); all.equal(savObsAll, glbObsAll); all.equal(sav_models_lst, glb_models_lst)
#load(file = paste0(glbOut$pfx, "dsk_knitr.RData"))
#cmpCols <- names(glbObsAll)[!grepl("\\.Final\\.", names(glbObsAll))]; all.equal(savObsAll[, cmpCols], glbObsAll[, cmpCols]); all.equal(savObsAll[, "H.P.http"], glbObsAll[, "H.P.http"]);
replay.petrisim(pn = glb_analytics_pn,
replay.trans = (glb_analytics_avl_objs <- c(glb_analytics_avl_objs,
"data.training.all.prediction","model.final")), flip_coord = TRUE)## time trans "bgn " "fit.data.training.all " "predict.data.new " "end "
## 0.0000 multiple enabled transitions: data.training.all data.new model.selected firing: model.selected
## 1.0000 3 2 1 0 0
## 1.0000 multiple enabled transitions: data.training.all data.new model.selected model.final data.training.all.prediction firing: data.training.all.prediction
## 2.0000 5 2 0 0 1## Warning in replay.petrisim(pn = glb_analytics_pn, replay.trans =
## (glb_analytics_avl_objs <- c(glb_analytics_avl_objs, : Transition:
## model.final not enabled; adding missing token(s)## Warning in replay.petrisim(pn = glb_analytics_pn, replay.trans
## = (glb_analytics_avl_objs <- c(glb_analytics_avl_objs, : Place:
## fit.data.training.all: added 1 missing token## 2.0000 multiple enabled transitions: data.training.all data.new model.selected model.final data.training.all.prediction firing: model.final
## 3.0000 4 2 0 1 1
glb_chunks_df <- myadd_chunk(glb_chunks_df, "predict.data.new", major.inc = TRUE)## label step_major step_minor label_minor bgn end
## 4 fit.data.training 2 1 1 482.192 490.281
## 5 predict.data.new 3 0 0 490.282 NA
## elapsed
## 4 8.089
## 5 NAStep 3.0: predict data new
## Warning in glb_get_predictions(obs_df, mdl_id = glbMdlFinId, rsp_var =
## glb_rsp_var, : Using default probability threshold: 0.45
## Warning in glb_get_predictions(obs_df, mdl_id = glbMdlFinId, rsp_var =
## glb_rsp_var, : Using default probability threshold: 0.45## Warning in glb_analytics_diag_plots(obs_df = glbObsNew, mdl_id =
## glbMdlFinId, : Limiting important feature scatter plots to 5 out of 182## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## Warning: Removed 547 rows containing missing values (geom_point).
## NULL## Loading required package: tidyr##
## Attaching package: 'tidyr'## The following object is masked from 'package:Matrix':
##
## expand## [1] "OOBobs total range outliers: 0"
## [1] "newobs total range outliers: 0"## [1] "Stacking file Q109244No_AllXpreProc_cnk03_rest_out_fin.csv to prediction outputs..."## [1] 0.45## [1] "glbMdlSelId: All.X#zv.pca#rcv#glmnet"## [1] "glbMdlFinId: Final.All.X#zv.pca##glmnet"## [1] "Cross Validation issues:"
## MFO###myMFO_classfr Random###myrandom_classfr
## 0 0
## Max.cor.Y.rcv.1X1###glmnet Final.All.X#zv.pca##glmnet
## 0 0## max.Accuracy.OOB max.AUCROCR.OOB
## All.X#zv.pca#rcv#glmnet 0.6185102 0.6396502
## Ensemble.auto.4##rcv#glmnet 0.6094808 0.6235304
## Ensemble.auto.1##rcv#glmnet 0.6072235 0.6397935
## Ensemble.auto.3##rcv#glmnet 0.6072235 0.6395887
## Ensemble.auto.2##rcv#glmnet 0.6072235 0.6395682
## All.X#zv.YeoJohnson.pca#rcv#glmnet 0.6049661 0.6418008
## Ensemble.auto.7##rcv#glmnet 0.6049661 0.6229978
## Ensemble.auto.6##rcv#glmnet 0.6027088 0.6253328
## Ensemble.auto.8##rcv#glmnet 0.6027088 0.6229773
## Ensemble.auto.9##rcv#glmnet 0.6027088 0.6229773
## Ensemble.auto.5##rcv#glmnet 0.6004515 0.6245955
## All.X#YeoJohnson#rcv#glmnet 0.6004515 0.6183995
## Ensemble.auto.10##rcv#glmnet 0.6004515 0.6129306
## All.X#expoTrans#rcv#glmnet 0.5981941 0.6183790
## All.X##rcv#glmnet 0.5981941 0.6177236
## All.X#conditionalX#rcv#glmnet 0.5981941 0.6177236
## All.X#zv#rcv#glmnet 0.5981941 0.6177236
## All.X#center#rcv#glmnet 0.5981941 0.6177236
## All.X#scale#rcv#glmnet 0.5981941 0.6177236
## All.X#center.scale#rcv#glmnet 0.5981941 0.6177236
## All.X#BoxCox#rcv#glmnet 0.5981941 0.6177236
## All.X#range#rcv#glmnet 0.5981941 0.6177031
## All.X##rcv#gbm 0.5981941 0.6071853
## All.X##rcv#nnet 0.5936795 0.6079329
## All.X##rcv#earth 0.5891648 0.6300131
## All.X##rcv#bayesglm 0.5891648 0.6229569
## All.X##rcv#glm 0.5891648 0.6215845
## All.X##adaptive_cv#glmnet 0.5891648 0.5972512
## All.X##rcv#bagEarth 0.5869074 0.6166482
## All.X#nzv#rcv#glmnet 0.5869074 0.6160338
## All.X##cv#glmnet 0.5869074 0.6066527
## All.X##LGOCV#glmnet 0.5869074 0.6066527
## All.X##boot#glmnet 0.5869074 0.6066527
## Ensemble.auto.11##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.13##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.12##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.14##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.15##rcv#glmnet 0.5869074 0.6066527
## All.X##boot632#glmnet 0.5869074 0.6066527
## Ensemble.auto.16##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.17##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.19##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.20##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.22##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.21##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.26##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.25##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.24##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.23##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.28##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.18##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.27##rcv#glmnet 0.5869074 0.6066527
## Ensemble.auto.29##rcv#glmnet 0.5869074 0.6066527
## All.X##rcv#rf 0.5846501 0.5972512
## All.X##rcv#avNNet 0.5846501 0.5963500
## Low.cor.X##rcv#glmnet 0.5801354 0.6063250
## RFE.X##rcv#glmnet 0.5733634 0.5998013
## Interact.High.cor.Y##rcv#glmnet 0.5733634 0.5847057
## All.X#spatialSign#rcv#glmnet 0.5620767 0.5909631
## All.X##rcv#rpart 0.5530474 0.5700811
## Max.cor.Y.rcv.1X1###glmnet 0.5485327 0.5505203
## Max.cor.Y##rcv#rpart 0.5440181 0.5511143
## All.X#ica#rcv#glmnet 0.5417607 0.5020483
## Random###myrandom_classfr 0.5349887 0.5054791
## MFO###myMFO_classfr 0.5349887 0.5000000
## Final.All.X#zv.pca##glmnet NA NA
## max.AUCpROC.OOB
## All.X#zv.pca#rcv#glmnet 0.6098275
## Ensemble.auto.4##rcv#glmnet 0.6042256
## Ensemble.auto.1##rcv#glmnet 0.6062431
## Ensemble.auto.3##rcv#glmnet 0.6059256
## Ensemble.auto.2##rcv#glmnet 0.6059256
## All.X#zv.YeoJohnson.pca#rcv#glmnet 0.5909119
## Ensemble.auto.7##rcv#glmnet 0.5955819
## Ensemble.auto.6##rcv#glmnet 0.5902974
## Ensemble.auto.8##rcv#glmnet 0.5955819
## Ensemble.auto.9##rcv#glmnet 0.5955819
## Ensemble.auto.5##rcv#glmnet 0.5954693
## All.X#YeoJohnson#rcv#glmnet 0.5511245
## Ensemble.auto.10##rcv#glmnet 0.5957867
## All.X#expoTrans#rcv#glmnet 0.5511245
## All.X##rcv#glmnet 0.5514420
## All.X#conditionalX#rcv#glmnet 0.5514420
## All.X#zv#rcv#glmnet 0.5514420
## All.X#center#rcv#glmnet 0.5514420
## All.X#scale#rcv#glmnet 0.5514420
## All.X#center.scale#rcv#glmnet 0.5514420
## All.X#BoxCox#rcv#glmnet 0.5514420
## All.X#range#rcv#glmnet 0.5514420
## All.X##rcv#gbm 0.5939945
## All.X##rcv#nnet 0.5793392
## All.X##rcv#earth 0.5711769
## All.X##rcv#bayesglm 0.5647761
## All.X##rcv#glm 0.5801790
## All.X##adaptive_cv#glmnet 0.5777518
## All.X##rcv#bagEarth 0.5831285
## All.X#nzv#rcv#glmnet 0.5493323
## All.X##cv#glmnet 0.5745770
## All.X##LGOCV#glmnet 0.5745770
## All.X##boot#glmnet 0.5745770
## Ensemble.auto.11##rcv#glmnet 0.5745770
## Ensemble.auto.13##rcv#glmnet 0.5745770
## Ensemble.auto.12##rcv#glmnet 0.5745770
## Ensemble.auto.14##rcv#glmnet 0.5745770
## Ensemble.auto.15##rcv#glmnet 0.5745770
## All.X##boot632#glmnet 0.5745770
## Ensemble.auto.16##rcv#glmnet 0.5745770
## Ensemble.auto.17##rcv#glmnet 0.5745770
## Ensemble.auto.19##rcv#glmnet 0.5745770
## Ensemble.auto.20##rcv#glmnet 0.5745770
## Ensemble.auto.22##rcv#glmnet 0.5745770
## Ensemble.auto.21##rcv#glmnet 0.5745770
## Ensemble.auto.26##rcv#glmnet 0.5745770
## Ensemble.auto.25##rcv#glmnet 0.5745770
## Ensemble.auto.24##rcv#glmnet 0.5745770
## Ensemble.auto.23##rcv#glmnet 0.5745770
## Ensemble.auto.28##rcv#glmnet 0.5745770
## Ensemble.auto.18##rcv#glmnet 0.5745770
## Ensemble.auto.27##rcv#glmnet 0.5745770
## Ensemble.auto.29##rcv#glmnet 0.5745770
## All.X##rcv#rf 0.5758470
## All.X##rcv#avNNet 0.5765946
## Low.cor.X##rcv#glmnet 0.5447954
## RFE.X##rcv#glmnet 0.5496702
## Interact.High.cor.Y##rcv#glmnet 0.5682479
## All.X#spatialSign#rcv#glmnet 0.5453177
## All.X##rcv#rpart 0.5522306
## Max.cor.Y.rcv.1X1###glmnet 0.5471714
## Max.cor.Y##rcv#rpart 0.5471714
## All.X#ica#rcv#glmnet 0.5072816
## Random###myrandom_classfr 0.5555897
## MFO###myMFO_classfr 0.5000000
## Final.All.X#zv.pca##glmnet NA
## min.elapsedtime.everything
## All.X#zv.pca#rcv#glmnet 37.877
## Ensemble.auto.4##rcv#glmnet 2.287
## Ensemble.auto.1##rcv#glmnet 2.134
## Ensemble.auto.3##rcv#glmnet 1.997
## Ensemble.auto.2##rcv#glmnet 1.919
## All.X#zv.YeoJohnson.pca#rcv#glmnet 92.648
## Ensemble.auto.7##rcv#glmnet 2.203
## Ensemble.auto.6##rcv#glmnet 2.160
## Ensemble.auto.8##rcv#glmnet 2.178
## Ensemble.auto.9##rcv#glmnet 2.214
## Ensemble.auto.5##rcv#glmnet 2.078
## All.X#YeoJohnson#rcv#glmnet 20.549
## Ensemble.auto.10##rcv#glmnet 2.251
## All.X#expoTrans#rcv#glmnet 41.608
## All.X##rcv#glmnet 8.285
## All.X#conditionalX#rcv#glmnet 9.076
## All.X#zv#rcv#glmnet 9.668
## All.X#center#rcv#glmnet 9.949
## All.X#scale#rcv#glmnet 9.998
## All.X#center.scale#rcv#glmnet 11.201
## All.X#BoxCox#rcv#glmnet 12.743
## All.X#range#rcv#glmnet 10.244
## All.X##rcv#gbm 40.996
## All.X##rcv#nnet 51.376
## All.X##rcv#earth 32.993
## All.X##rcv#bayesglm 18.802
## All.X##rcv#glm 10.503
## All.X##adaptive_cv#glmnet 4.892
## All.X##rcv#bagEarth 1073.451
## All.X#nzv#rcv#glmnet 12.237
## All.X##cv#glmnet 2.109
## All.X##LGOCV#glmnet 2.158
## All.X##boot#glmnet 2.185
## Ensemble.auto.11##rcv#glmnet 2.286
## Ensemble.auto.13##rcv#glmnet 2.287
## Ensemble.auto.12##rcv#glmnet 2.350
## Ensemble.auto.14##rcv#glmnet 2.369
## Ensemble.auto.15##rcv#glmnet 2.389
## All.X##boot632#glmnet 2.414
## Ensemble.auto.16##rcv#glmnet 2.441
## Ensemble.auto.17##rcv#glmnet 2.481
## Ensemble.auto.19##rcv#glmnet 2.497
## Ensemble.auto.20##rcv#glmnet 2.586
## Ensemble.auto.22##rcv#glmnet 2.615
## Ensemble.auto.21##rcv#glmnet 2.636
## Ensemble.auto.26##rcv#glmnet 2.654
## Ensemble.auto.25##rcv#glmnet 2.680
## Ensemble.auto.24##rcv#glmnet 2.700
## Ensemble.auto.23##rcv#glmnet 2.741
## Ensemble.auto.28##rcv#glmnet 2.795
## Ensemble.auto.18##rcv#glmnet 2.823
## Ensemble.auto.27##rcv#glmnet 2.887
## Ensemble.auto.29##rcv#glmnet 2.900
## All.X##rcv#rf 31.736
## All.X##rcv#avNNet 103.553
## Low.cor.X##rcv#glmnet 8.077
## RFE.X##rcv#glmnet 2.464
## Interact.High.cor.Y##rcv#glmnet 2.698
## All.X#spatialSign#rcv#glmnet 14.076
## All.X##rcv#rpart 9.280
## Max.cor.Y.rcv.1X1###glmnet 0.796
## Max.cor.Y##rcv#rpart 1.403
## All.X#ica#rcv#glmnet 21.649
## Random###myrandom_classfr 0.301
## MFO###myMFO_classfr 0.455
## Final.All.X#zv.pca##glmnet 2.118
## max.Accuracy.fit opt.prob.threshold.fit
## All.X#zv.pca#rcv#glmnet 0.5690120 0.50
## Ensemble.auto.4##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.1##rcv#glmnet 0.6599656 0.60
## Ensemble.auto.3##rcv#glmnet 0.6613076 0.50
## Ensemble.auto.2##rcv#glmnet 0.6618823 0.50
## All.X#zv.YeoJohnson.pca#rcv#glmnet 0.5778312 0.50
## Ensemble.auto.7##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.6##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.8##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.9##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.5##rcv#glmnet 0.9994256 0.50
## All.X#YeoJohnson#rcv#glmnet 0.5739975 0.50
## Ensemble.auto.10##rcv#glmnet 0.9994256 0.50
## All.X#expoTrans#rcv#glmnet 0.5738059 0.50
## All.X##rcv#glmnet 0.5764853 0.50
## All.X#conditionalX#rcv#glmnet 0.5764853 0.50
## All.X#zv#rcv#glmnet 0.5764853 0.50
## All.X#center#rcv#glmnet 0.5764853 0.50
## All.X#scale#rcv#glmnet 0.5764853 0.50
## All.X#center.scale#rcv#glmnet 0.5764853 0.50
## All.X#BoxCox#rcv#glmnet 0.5764853 0.50
## All.X#range#rcv#glmnet 0.5764853 0.50
## All.X##rcv#gbm 0.5805007 0.50
## All.X##rcv#nnet 0.5542802 0.45
## All.X##rcv#earth 0.5596389 0.45
## All.X##rcv#bayesglm 0.5456648 0.50
## All.X##rcv#glm 0.5462408 0.50
## All.X##adaptive_cv#glmnet 0.9994256 0.50
## All.X##rcv#bagEarth 0.5401372 0.50
## All.X#nzv#rcv#glmnet 0.5762963 0.45
## All.X##cv#glmnet 0.9994263 0.50
## All.X##LGOCV#glmnet 0.9992320 0.50
## All.X##boot#glmnet 1.0000000 0.50
## Ensemble.auto.11##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.13##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.12##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.14##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.15##rcv#glmnet 0.9994256 0.50
## All.X##boot632#glmnet 0.9997887 0.50
## Ensemble.auto.16##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.17##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.19##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.20##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.22##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.21##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.26##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.25##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.24##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.23##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.28##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.18##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.27##rcv#glmnet 0.9994256 0.50
## Ensemble.auto.29##rcv#glmnet 0.9994256 0.50
## All.X##rcv#rf 0.9994256 0.50
## All.X##rcv#avNNet 0.5628910 0.50
## Low.cor.X##rcv#glmnet 0.5764843 0.45
## RFE.X##rcv#glmnet 0.5828137 0.50
## Interact.High.cor.Y##rcv#glmnet 0.5540889 0.50
## All.X#spatialSign#rcv#glmnet 0.5734181 0.45
## All.X##rcv#rpart 0.5466223 0.50
## Max.cor.Y.rcv.1X1###glmnet 0.5588742 0.50
## Max.cor.Y##rcv#rpart 0.5588680 0.50
## All.X#ica#rcv#glmnet 0.5387702 0.50
## Random###myrandom_classfr 0.5364733 0.55
## MFO###myMFO_classfr 0.5364733 0.50
## Final.All.X#zv.pca##glmnet 0.6648352 0.45
## opt.prob.threshold.OOB
## All.X#zv.pca#rcv#glmnet 0.45
## Ensemble.auto.4##rcv#glmnet 0.50
## Ensemble.auto.1##rcv#glmnet 0.50
## Ensemble.auto.3##rcv#glmnet 0.50
## Ensemble.auto.2##rcv#glmnet 0.50
## All.X#zv.YeoJohnson.pca#rcv#glmnet 0.45
## Ensemble.auto.7##rcv#glmnet 0.55
## Ensemble.auto.6##rcv#glmnet 0.55
## Ensemble.auto.8##rcv#glmnet 0.55
## Ensemble.auto.9##rcv#glmnet 0.55
## Ensemble.auto.5##rcv#glmnet 0.50
## All.X#YeoJohnson#rcv#glmnet 0.45
## Ensemble.auto.10##rcv#glmnet 0.50
## All.X#expoTrans#rcv#glmnet 0.45
## All.X##rcv#glmnet 0.45
## All.X#conditionalX#rcv#glmnet 0.45
## All.X#zv#rcv#glmnet 0.45
## All.X#center#rcv#glmnet 0.45
## All.X#scale#rcv#glmnet 0.45
## All.X#center.scale#rcv#glmnet 0.45
## All.X#BoxCox#rcv#glmnet 0.45
## All.X#range#rcv#glmnet 0.45
## All.X##rcv#gbm 0.50
## All.X##rcv#nnet 0.30
## All.X##rcv#earth 0.55
## All.X##rcv#bayesglm 0.45
## All.X##rcv#glm 0.45
## All.X##adaptive_cv#glmnet 0.45
## All.X##rcv#bagEarth 0.50
## All.X#nzv#rcv#glmnet 0.45
## All.X##cv#glmnet 0.45
## All.X##LGOCV#glmnet 0.45
## All.X##boot#glmnet 0.45
## Ensemble.auto.11##rcv#glmnet 0.45
## Ensemble.auto.13##rcv#glmnet 0.45
## Ensemble.auto.12##rcv#glmnet 0.45
## Ensemble.auto.14##rcv#glmnet 0.45
## Ensemble.auto.15##rcv#glmnet 0.45
## All.X##boot632#glmnet 0.45
## Ensemble.auto.16##rcv#glmnet 0.45
## Ensemble.auto.17##rcv#glmnet 0.45
## Ensemble.auto.19##rcv#glmnet 0.45
## Ensemble.auto.20##rcv#glmnet 0.45
## Ensemble.auto.22##rcv#glmnet 0.45
## Ensemble.auto.21##rcv#glmnet 0.45
## Ensemble.auto.26##rcv#glmnet 0.45
## Ensemble.auto.25##rcv#glmnet 0.45
## Ensemble.auto.24##rcv#glmnet 0.45
## Ensemble.auto.23##rcv#glmnet 0.45
## Ensemble.auto.28##rcv#glmnet 0.45
## Ensemble.auto.18##rcv#glmnet 0.45
## Ensemble.auto.27##rcv#glmnet 0.45
## Ensemble.auto.29##rcv#glmnet 0.45
## All.X##rcv#rf 0.55
## All.X##rcv#avNNet 0.55
## Low.cor.X##rcv#glmnet 0.45
## RFE.X##rcv#glmnet 0.45
## Interact.High.cor.Y##rcv#glmnet 0.50
## All.X#spatialSign#rcv#glmnet 0.50
## All.X##rcv#rpart 0.55
## Max.cor.Y.rcv.1X1###glmnet 0.55
## Max.cor.Y##rcv#rpart 0.50
## All.X#ica#rcv#glmnet 0.50
## Random###myrandom_classfr 0.55
## MFO###myMFO_classfr 0.50
## Final.All.X#zv.pca##glmnet NA## [1] "All.X#zv.pca#rcv#glmnet OOB confusion matrix & accuracy: "
## Prediction
## Reference D R
## D 132 105
## R 64 142## err.abs.fit.sum err.abs.OOB.sum err.abs.trn.sum err.abs.new.sum
## PKy 11.86102 1.086637 13.16833 NA
## N 92.23300 24.689085 116.66913 NA
## MKn 80.88852 19.089443 99.87173 NA
## SKn 340.18513 103.541909 443.20029 NA
## PKn 23.02028 4.839375 27.94177 NA
## SKy 19.44426 9.778182 28.99262 NA
## MKy 190.10070 40.247267 232.57025 NA
## .freqRatio.Fit .freqRatio.OOB .freqRatio.Tst .n.Fit .n.New.D .n.New.R
## PKy 0.01608271 0.004514673 0.003656307 28 1 1
## N 0.12004595 0.108352144 0.107861060 209 23 36
## MKn 0.10798392 0.090293454 0.089579525 188 29 20
## SKn 0.44859276 0.501128668 0.504570384 781 143 133
## PKn 0.03216542 0.024830700 0.021937843 56 11 1
## SKy 0.02699598 0.051918736 0.051188300 47 10 18
## MKy 0.24813326 0.218961625 0.221206581 432 54 67
## .n.OOB .n.Trn.D .n.Trn.R .n.Tst .n.fit .n.new .n.trn err.abs.OOB.mean
## PKy 2 12 18 2 28 2 30 0.5433185
## N 48 131 126 59 209 59 257 0.5143559
## MKn 40 124 104 49 188 49 228 0.4772361
## SKn 222 561 442 276 781 276 1003 0.4664050
## PKn 11 46 21 12 56 12 67 0.4399432
## SKy 23 37 33 28 47 28 70 0.4251384
## MKy 97 260 269 121 432 121 529 0.4149203
## err.abs.fit.mean err.abs.new.mean err.abs.trn.mean
## PKy 0.4236078 NA 0.4389442
## N 0.4413062 NA 0.4539655
## MKn 0.4302581 NA 0.4380339
## SKn 0.4355763 NA 0.4418747
## PKn 0.4110764 NA 0.4170413
## SKy 0.4137076 NA 0.4141802
## MKy 0.4400479 NA 0.4396413
## err.abs.fit.sum err.abs.OOB.sum err.abs.trn.sum err.abs.new.sum
## 757.732903 203.271898 962.414109 NA
## .freqRatio.Fit .freqRatio.OOB .freqRatio.Tst .n.Fit
## 1.000000 1.000000 1.000000 1741.000000
## .n.New.D .n.New.R .n.OOB .n.Trn.D
## 271.000000 276.000000 443.000000 1171.000000
## .n.Trn.R .n.Tst .n.fit .n.new
## 1013.000000 547.000000 1741.000000 547.000000
## .n.trn err.abs.OOB.mean err.abs.fit.mean err.abs.new.mean
## 2184.000000 3.281317 2.995580 NA
## err.abs.trn.mean
## 3.043681## [1] "Features Importance for selected models:"## All.X.zv.pca.rcv.glmnet.imp Final.All.X.zv.pca..glmnet.imp
## PC176 1.000000e+02 39.7504818
## PC143 9.275090e+01 46.7640067
## PC16 8.520516e+01 27.7333355
## PC170 7.479393e+01 47.0773911
## PC35 7.315796e+01 6.8479330
## PC144 7.010065e+01 14.2694009
## PC128 6.982828e+01 8.5027014
## PC78 6.978608e+01 22.6176140
## PC130 6.950057e+01 100.0000000
## PC33 6.838701e+01 12.2452460
## PC111 6.230038e+01 0.0000000
## PC110 6.055558e+01 11.6801702
## PC123 5.724446e+01 0.0000000
## PC166 5.488771e+01 49.9400943
## PC73 5.291358e+01 15.5662427
## PC165 5.257870e+01 0.0000000
## PC29 5.254738e+01 2.8597341
## PC20 5.129963e+01 37.2581878
## PC163 5.034326e+01 16.9912818
## PC21 4.988859e+01 67.6291473
## PC17 4.985385e+01 37.6340316
## PC115 4.921876e+01 0.0000000
## PC106 4.872059e+01 0.0000000
## PC113 4.852200e+01 28.1272489
## PC47 4.830536e+01 22.5319977
## PC14 4.646959e+01 21.5576443
## PC138 4.559336e+01 2.5712020
## PC44 4.445818e+01 19.0624764
## PC174 4.419996e+01 3.6349766
## PC169 4.175077e+01 0.0000000
## PC122 4.042866e+01 4.7070287
## PC27 4.033550e+01 38.8512853
## PC53 3.961769e+01 0.0000000
## PC168 3.922960e+01 17.4547735
## PC87 3.885272e+01 0.0000000
## PC83 3.881538e+01 19.7384404
## PC74 3.832925e+01 15.3029459
## PC10 3.822141e+01 18.8904392
## PC70 3.815807e+01 0.0000000
## PC137 3.728419e+01 16.9504693
## PC155 3.706870e+01 9.2180488
## PC124 3.662386e+01 0.2418955
## PC8 3.601150e+01 30.9117104
## PC147 3.586515e+01 19.0063835
## PC45 3.501084e+01 0.0000000
## PC153 3.481962e+01 18.1008475
## PC6 3.450937e+01 31.7449693
## PC15 3.401918e+01 0.0000000
## PC11 3.376872e+01 19.9626104
## PC55 3.366349e+01 0.0000000
## PC9 3.351613e+01 23.9140094
## PC91 3.343727e+01 5.6951291
## PC89 3.230346e+01 5.6774383
## PC13 3.070796e+01 3.9714677
## PC180 2.996555e+01 0.0000000
## PC34 2.985494e+01 9.9111577
## PC136 2.984962e+01 36.7426511
## PC7 2.909991e+01 25.6944700
## PC28 2.888611e+01 70.8946101
## PC154 2.783634e+01 0.0000000
## PC58 2.727390e+01 11.1143952
## PC135 2.697665e+01 18.4779731
## PC75 2.638460e+01 13.8468267
## PC171 2.531038e+01 13.3782616
## PC120 2.489996e+01 55.3358766
## PC146 2.488196e+01 0.0000000
## PC86 2.485278e+01 13.3447711
## PC94 2.450185e+01 0.0000000
## PC156 2.446547e+01 18.2906884
## PC159 2.441279e+01 0.0000000
## PC131 2.388039e+01 0.0000000
## PC145 2.367954e+01 22.3553864
## PC18 2.357931e+01 45.5370482
## PC24 2.329016e+01 21.9935040
## PC90 2.319657e+01 0.0000000
## PC4 2.088729e+01 11.8561818
## PC26 2.038367e+01 51.5920368
## PC60 1.935100e+01 21.7842379
## PC30 1.897980e+01 2.1469129
## PC38 1.838838e+01 17.0532725
## PC66 1.699096e+01 31.2076021
## PC148 1.685374e+01 20.6352870
## PC98 1.638492e+01 0.0000000
## PC167 1.633314e+01 0.0000000
## PC152 1.613821e+01 24.4339200
## PC117 1.613769e+01 0.0000000
## PC52 1.524829e+01 14.0037485
## PC69 1.487455e+01 0.0000000
## PC132 1.432095e+01 40.2056225
## PC36 1.345465e+01 53.5826145
## PC112 1.338934e+01 0.0000000
## PC57 1.296634e+01 2.5770127
## PC59 1.263362e+01 0.0000000
## PC64 1.202000e+01 0.0000000
## PC99 1.130747e+01 6.9211866
## PC141 1.112507e+01 13.8388427
## PC161 1.062154e+01 12.5917028
## PC77 1.028165e+01 29.7193577
## PC48 1.022987e+01 23.4502639
## PC95 9.695666e+00 11.3193024
## PC79 7.362601e+00 40.5758428
## PC23 6.975107e+00 11.0415398
## PC63 6.468828e+00 19.7138926
## PC139 4.823095e+00 49.1075520
## PC177 4.053201e+00 21.3510636
## PC54 4.050821e+00 22.1353875
## PC92 3.818783e+00 44.4511794
## PC162 3.612958e+00 14.0926054
## PC101 1.176511e+00 17.8342326
## PC142 6.509297e-01 27.1053068
## PC164 1.321090e-01 21.3710389
## PC12 8.425935e-03 45.1817693
## PC134 0.000000e+00 62.6873757
## PC116 0.000000e+00 59.7109782
## PC125 0.000000e+00 53.0630014
## PC31 0.000000e+00 37.3390487
## PC85 0.000000e+00 34.9031946
## PC140 0.000000e+00 28.0927410
## PC121 0.000000e+00 27.7185609
## PC46 0.000000e+00 27.1077584
## PC50 0.000000e+00 27.0272641
## PC65 0.000000e+00 22.4359425
## PC158 0.000000e+00 21.5721573
## PC25 0.000000e+00 21.5276110
## PC41 0.000000e+00 21.2769869
## PC127 0.000000e+00 20.9398104
## PC126 0.000000e+00 18.3783143
## PC32 0.000000e+00 15.5824392
## PC51 0.000000e+00 14.7363183
## PC67 0.000000e+00 12.7995887
## PC62 0.000000e+00 12.5560176
## PC150 0.000000e+00 11.7760464
## PC68 0.000000e+00 10.6593573
## PC96 0.000000e+00 10.6186471
## PC104 0.000000e+00 10.5997138
## PC182 NA 31.2291154## [1] "glbObsNew prediction stats:"##
## D R
## 271 276## label step_major step_minor label_minor bgn end
## 5 predict.data.new 3 0 0 490.282 525.885
## 6 display.session.info 4 0 0 525.885 NA
## elapsed
## 5 35.603
## 6 NANull Hypothesis (\(\sf{H_{0}}\)): mpg is not impacted by am_fctr.
The variance by am_fctr appears to be independent. #{r q1, cache=FALSE} # print(t.test(subset(cars_df, am_fctr == "automatic")$mpg, # subset(cars_df, am_fctr == "manual")$mpg, # var.equal=FALSE)$conf) # We reject the null hypothesis i.e. we have evidence to conclude that am_fctr impacts mpg (95% confidence). Manual transmission is better for miles per gallon versus automatic transmission.
## label step_major step_minor label_minor bgn end
## 1 fit.models_2 1 0 0 9.814 436.304
## 2 fit.models 1 1 1 436.304 473.075
## 5 predict.data.new 3 0 0 490.282 525.885
## 3 fit.data.training 2 0 0 473.076 482.191
## 4 fit.data.training 2 1 1 482.192 490.281
## elapsed duration
## 1 426.490 426.490
## 2 36.771 36.771
## 5 35.603 35.603
## 3 9.115 9.115
## 4 8.089 8.089
## [1] "Total Elapsed Time: 525.885 secs"
## [1] label step_major step_minor label_minor bgn end
## [7] elapsed duration
## <0 rows> (or 0-length row.names)
## [1] "Total Elapsed Time: -Inf secs"